RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 FLNCQ14315 2725 aa12.36□□□□□ -0.43
VAMP1-206ENST00000538970 NBPF19A0A087WUL8 3843 aa12.36□□□□□ -0.43
VAMP1-206ENST00000538970 MN1Q10571 1320 aaPredicted RBP12.36□□□□□ -0.43
VAMP1-206ENST00000538970 SSU72P8A0A1W2PR75 194 aa12.35□□□□□ -0.43
VAMP1-206ENST00000538970 LILRA5A6NI73 299 aa12.35□□□□□ -0.43
VAMP1-206ENST00000538970 OR5K4A6NMS3 321 aa12.35□□□□□ -0.43
VAMP1-206ENST00000538970 GPR89AB7ZAQ6 455 aa12.35□□□□□ -0.43
VAMP1-206ENST00000538970 APOL1O14791 398 aa12.35□□□□□ -0.43
VAMP1-206ENST00000538970 SLC4A1P02730 911 aa12.35□□□□□ -0.43
VAMP1-206ENST00000538970 PIRTP0C851 137 aa12.35□□□□□ -0.43
VAMP1-206ENST00000538970 GPR89BP0CG08 455 aa12.35□□□□□ -0.43
VAMP1-206ENST00000538970 GP1BBP13224 206 aa12.35□□□□□ -0.43
VAMP1-206ENST00000538970 AP1B1Q10567 949 aa12.35□□□□□ -0.43
VAMP1-206ENST00000538970 SLC14A2Q15849 920 aa12.35□□□□□ -0.43
VAMP1-206ENST00000538970 ZNF648Q5T619 568 aaPredicted RBP12.35□□□□□ -0.43
VAMP1-206ENST00000538970 PDPK2PQ6A1A2 396 aa12.35□□□□□ -0.43
VAMP1-206ENST00000538970 CEACAM20Q6UY09 585 aa12.35□□□□□ -0.43
VAMP1-206ENST00000538970 ATG14Q6ZNE5 492 aa12.35□□□□□ -0.43
VAMP1-206ENST00000538970 TMC3Q7Z5M5 1100 aa12.35□□□□□ -0.43
VAMP1-206ENST00000538970 ADGRG6Q86SQ4 1221 aa12.35□□□□□ -0.43
VAMP1-206ENST00000538970 NLGN4XQ8N0W4 816 aa12.35□□□□□ -0.43
VAMP1-206ENST00000538970 TRAM1L1Q8N609 369 aa12.35□□□□□ -0.43
VAMP1-206ENST00000538970 AVL9Q8NBF6 648 aa12.35□□□□□ -0.43
VAMP1-206ENST00000538970 NLGN4YQ8NFZ3 816 aaPredicted RBP12.35□□□□□ -0.43
VAMP1-206ENST00000538970 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.35□□□□□ -0.43
VAMP1-206ENST00000538970 TADA1Q96BN2 335 aa12.35□□□□□ -0.43
VAMP1-206ENST00000538970 PLEKHG4BQ96PX9 1271 aa12.35□□□□□ -0.43
VAMP1-206ENST00000538970 ZPBPQ9BS86 351 aa12.35□□□□□ -0.43
VAMP1-206ENST00000538970 SPATA16Q9BXB7 569 aa12.35□□□□□ -0.43
VAMP1-206ENST00000538970 TBC1D10AQ9BXI6 508 aa12.35□□□□□ -0.43
VAMP1-206ENST00000538970 SLC25A18Q9H1K4 315 aa12.35□□□□□ -0.43
VAMP1-206ENST00000538970 ADNPQ9H2P0 1102 aa12.35□□□□□ -0.43
VAMP1-206ENST00000538970 MAGEE1Q9HCI5 957 aa12.35□□□□□ -0.43
VAMP1-206ENST00000538970 TRIM39Q9HCM9 518 aa12.35□□□□□ -0.43
VAMP1-206ENST00000538970 APMAPQ9HDC9 416 aa12.35□□□□□ -0.43
VAMP1-206ENST00000538970 FBXO8Q9NRD0 319 aa12.35□□□□□ -0.43
VAMP1-206ENST00000538970 KLC4Q9NSK0 619 aa12.35□□□□□ -0.43
VAMP1-206ENST00000538970 SIDT1Q9NXL6 827 aaKnown RBP12.35□□□□□ -0.43
VAMP1-206ENST00000538970 CPNE7Q9UBL6 633 aa12.35□□□□□ -0.43
VAMP1-206ENST00000538970 KLHL3Q9UH77 587 aa12.35□□□□□ -0.43
VAMP1-206ENST00000538970 SHOC2Q9UQ13 582 aa12.35□□□□□ -0.43
VAMP1-206ENST00000538970 ZNF711Q9Y462 761 aa12.35□□□□□ -0.43
VAMP1-206ENST00000538970 ZFC3H1O60293 1989 aaKnown RBP12.34□□□□□ -0.43
VAMP1-206ENST00000538970 PRR19A6NJB7 356 aa12.34□□□□□ -0.43
VAMP1-206ENST00000538970 ZNF891A8MT65 544 aaPredicted RBP12.34□□□□□ -0.43
VAMP1-206ENST00000538970 PPP1R12AO14974 1030 aaPredicted RBP12.34□□□□□ -0.43
VAMP1-206ENST00000538970 CHUKO15111 745 aa12.34□□□□□ -0.43
VAMP1-206ENST00000538970 CAPN5O15484 640 aaPredicted RBP12.34□□□□□ -0.43
VAMP1-206ENST00000538970 MTA2O94776 668 aa12.34□□□□□ -0.43
VAMP1-206ENST00000538970 SLC25A14O95258 325 aaPredicted RBP12.34□□□□□ -0.43
VAMP1-206ENST00000538970 KRT1P04264 644 aa12.34□□□□□ -0.43
VAMP1-206ENST00000538970 TPM3P06753 285 aa12.34□□□□□ -0.43
VAMP1-206ENST00000538970 ANKRD34CP0C6C1 535 aa12.34□□□□□ -0.43
VAMP1-206ENST00000538970 POLE2P56282 527 aa12.34□□□□□ -0.43
VAMP1-206ENST00000538970 CDK18Q07002 472 aa12.34□□□□□ -0.43
VAMP1-206ENST00000538970 PDK1Q15118 436 aa12.34□□□□□ -0.43
VAMP1-206ENST00000538970 PCSK7Q16549 785 aa12.34□□□□□ -0.43
VAMP1-206ENST00000538970 PLA2G4EQ3MJ16 856 aa12.34□□□□□ -0.43
VAMP1-206ENST00000538970 CRTC3Q6UUV7 619 aa12.34□□□□□ -0.43
VAMP1-206ENST00000538970 NPNTQ6UXI9 565 aa12.34□□□□□ -0.43
VAMP1-206ENST00000538970 TIPARPQ7Z3E1 657 aaKnown RBP12.34□□□□□ -0.43
VAMP1-206ENST00000538970 KDELC2Q7Z4H8 507 aa12.34□□□□□ -0.43
VAMP1-206ENST00000538970 NT5DC3Q86UY8 548 aa12.34□□□□□ -0.43
VAMP1-206ENST00000538970 OR8K1Q8NGG5 319 aa12.34□□□□□ -0.43
VAMP1-206ENST00000538970 SLC35G2Q8TBE7 412 aa12.34□□□□□ -0.43
VAMP1-206ENST00000538970 GLYATL1Q969I3 302 aa12.34□□□□□ -0.43
VAMP1-206ENST00000538970 KIAA1143Q96AT1 154 aaPredicted RBP12.34□□□□□ -0.43
VAMP1-206ENST00000538970 SLC45A3Q96JT2 553 aa12.34□□□□□ -0.43
VAMP1-206ENST00000538970 AGAP3Q96P47 875 aa12.34□□□□□ -0.43
VAMP1-206ENST00000538970 SLC25A51Q9H1U9 297 aa12.34□□□□□ -0.43
VAMP1-206ENST00000538970 OSGEPL1Q9H4B0 414 aa12.34□□□□□ -0.43
VAMP1-206ENST00000538970 DEF6Q9H4E7 631 aa12.34□□□□□ -0.43
VAMP1-206ENST00000538970 GPN2Q9H9Y4 310 aaPredicted RBP12.34□□□□□ -0.43
VAMP1-206ENST00000538970 UCK1Q9HA47 277 aa12.34□□□□□ -0.43
VAMP1-206ENST00000538970 RAD18Q9NS91 495 aa12.34□□□□□ -0.43
VAMP1-206ENST00000538970 OGFRQ9NZT2 677 aa12.34□□□□□ -0.43
VAMP1-206ENST00000538970 SCHIP1Q9P0W5 487 aaPredicted RBP12.34□□□□□ -0.43
VAMP1-206ENST00000538970 SLC23A2Q9UGH3 650 aa12.34□□□□□ -0.43
VAMP1-206ENST00000538970 TMEM184BQ9Y519 407 aaPredicted RBP12.34□□□□□ -0.43
VAMP1-206ENST00000538970 LOC101059948A0A1B0GTJ6 334 aa12.33□□□□□ -0.44
VAMP1-206ENST00000538970 KMOO15229 486 aa12.33□□□□□ -0.44
VAMP1-206ENST00000538970 AKR1B10O60218 316 aa12.33□□□□□ -0.44
VAMP1-206ENST00000538970 MTX2O75431 263 aa12.33□□□□□ -0.44
VAMP1-206ENST00000538970 STK17BO94768 372 aa12.33□□□□□ -0.44
VAMP1-206ENST00000538970 DLGAP3O95886 979 aa12.33□□□□□ -0.44
VAMP1-206ENST00000538970 MT-CYBP00156 380 aaPredicted RBP12.33□□□□□ -0.44
VAMP1-206ENST00000538970 C9P02748 559 aa12.33□□□□□ -0.44
VAMP1-206ENST00000538970 ZFXP17010 805 aaPredicted RBP12.33□□□□□ -0.44
VAMP1-206ENST00000538970 XRCC1P18887 633 aaPredicted RBP12.33□□□□□ -0.44
VAMP1-206ENST00000538970 MAP4P27816 1152 aaKnown RBP12.33□□□□□ -0.44
VAMP1-206ENST00000538970 ARHGAP25P42331 645 aa12.33□□□□□ -0.44
VAMP1-206ENST00000538970 GFERP55789 205 aa12.33□□□□□ -0.44
VAMP1-206ENST00000538970 DYNLT1P63172 113 aa12.33□□□□□ -0.44
VAMP1-206ENST00000538970 KCNAB2Q13303 367 aa12.33□□□□□ -0.44
VAMP1-206ENST00000538970 TRIM14Q14142 442 aa12.33□□□□□ -0.44
VAMP1-206ENST00000538970 INSCQ1MX18 579 aa12.33□□□□□ -0.44
VAMP1-206ENST00000538970 LRRC38Q5VT99 294 aa12.33□□□□□ -0.44
VAMP1-206ENST00000538970 LRRTM4Q86VH4 590 aa12.33□□□□□ -0.44
VAMP1-206ENST00000538970 PLXDC1Q8IUK5 500 aa12.33□□□□□ -0.44
VAMP1-206ENST00000538970 RHOT2Q8IXI1 618 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms