RNA–Protein interactions for RNA: ENST00000538933.1

CLSTN3-208, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-208ENST00000538933 IFI35P80217 286 aaPredicted RBP12.44□□□□□ -0.42
CLSTN3-208ENST00000538933 ARF5P84085 180 aa12.44□□□□□ -0.42
CLSTN3-208ENST00000538933 B4GALNT1Q00973 533 aa12.44□□□□□ -0.42
CLSTN3-208ENST00000538933 KLRB1Q12918 225 aa12.44□□□□□ -0.42
CLSTN3-208ENST00000538933 ZBTB17Q13105 803 aa12.44□□□□□ -0.42
CLSTN3-208ENST00000538933 PRPSAP1Q14558 356 aa12.44□□□□□ -0.42
CLSTN3-208ENST00000538933 ALG11Q2TAA5 492 aa12.44□□□□□ -0.42
CLSTN3-208ENST00000538933 GLE1Q53GS7 698 aaKnown RBP12.44□□□□□ -0.42
CLSTN3-208ENST00000538933 TEX44Q53QW1 395 aa12.44□□□□□ -0.42
CLSTN3-208ENST00000538933 ANKRD20A2Q5SQ80 823 aa12.44□□□□□ -0.42
CLSTN3-208ENST00000538933 CERCAMQ5T4B2 595 aa12.44□□□□□ -0.42
CLSTN3-208ENST00000538933 ANKRD20A1Q5TYW2 823 aa12.44□□□□□ -0.42
CLSTN3-208ENST00000538933 TMEM164Q5U3C3 297 aa12.44□□□□□ -0.42
CLSTN3-208ENST00000538933 ANKRD20A3Q5VUR7 823 aa12.44□□□□□ -0.42
CLSTN3-208ENST00000538933 C4orf22Q6V702 233 aa12.44□□□□□ -0.42
CLSTN3-208ENST00000538933 RYBPQ8N488 228 aaPredicted RBP12.44□□□□□ -0.42
CLSTN3-208ENST00000538933 TAB3Q8N5C8 712 aaPredicted RBP12.44□□□□□ -0.42
CLSTN3-208ENST00000538933 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.44□□□□□ -0.42
CLSTN3-208ENST00000538933 PAF1Q8N7H5 531 aa12.44□□□□□ -0.42
CLSTN3-208ENST00000538933 NOA1Q8NC60 698 aaKnown RBP12.44□□□□□ -0.42
CLSTN3-208ENST00000538933 CCDC110Q8TBZ0 833 aa12.44□□□□□ -0.42
CLSTN3-208ENST00000538933 GPBAR1Q8TDU6 330 aa12.44□□□□□ -0.42
CLSTN3-208ENST00000538933 FATE1Q969F0 183 aa12.44□□□□□ -0.42
CLSTN3-208ENST00000538933 TSACCQ96A04 125 aaPredicted RBP12.44□□□□□ -0.42
CLSTN3-208ENST00000538933 SLC45A3Q96JT2 553 aa12.44□□□□□ -0.42
CLSTN3-208ENST00000538933 SPATA13Q96N96 652 aa12.44□□□□□ -0.42
CLSTN3-208ENST00000538933 LRRC1Q9BTT6 524 aa12.44□□□□□ -0.42
CLSTN3-208ENST00000538933 TRIM31Q9BZY9 425 aa12.44□□□□□ -0.42
CLSTN3-208ENST00000538933 GOLGA6AQ9NYA3 693 aa12.44□□□□□ -0.42
CLSTN3-208ENST00000538933 ITM2BQ9Y287 266 aa12.44□□□□□ -0.42
CLSTN3-208ENST00000538933 F8P00451 2351 aa12.43□□□□□ -0.42
CLSTN3-208ENST00000538933 C5orf60A6NFR6 353 aa12.43□□□□□ -0.42
CLSTN3-208ENST00000538933 ZNF891A8MT65 544 aaPredicted RBP12.43□□□□□ -0.42
CLSTN3-208ENST00000538933 EFCAB8A8MWE9 144 aa12.43□□□□□ -0.42
CLSTN3-208ENST00000538933 TOR1BO14657 336 aa12.43□□□□□ -0.42
CLSTN3-208ENST00000538933 NDC80O14777 642 aa12.43□□□□□ -0.42
CLSTN3-208ENST00000538933 AREL1O15033 823 aa12.43□□□□□ -0.42
CLSTN3-208ENST00000538933 B4GAT1O43505 415 aa12.43□□□□□ -0.42
CLSTN3-208ENST00000538933 DUX1O43812 170 aa12.43□□□□□ -0.42
CLSTN3-208ENST00000538933 ZMPSTE24O75844 475 aa12.43□□□□□ -0.42
CLSTN3-208ENST00000538933 HEXIM1O94992 359 aaKnown RBP12.43□□□□□ -0.42
CLSTN3-208ENST00000538933 IGSF6O95976 241 aa12.43□□□□□ -0.42
CLSTN3-208ENST00000538933 RHOXF2BP0C7M4 288 aa12.43□□□□□ -0.42
CLSTN3-208ENST00000538933 ETS1P14921 441 aa12.43□□□□□ -0.42
CLSTN3-208ENST00000538933 GNLYP22749 145 aa12.43□□□□□ -0.42
CLSTN3-208ENST00000538933 COL8A1P27658 744 aa12.43□□□□□ -0.42
CLSTN3-208ENST00000538933 DCTP40126 519 aa12.43□□□□□ -0.42
CLSTN3-208ENST00000538933 PTGIRP43119 386 aa12.43□□□□□ -0.42
CLSTN3-208ENST00000538933 SERPINH1P50454 418 aaKnown RBP12.43□□□□□ -0.42
CLSTN3-208ENST00000538933 ATP1A2P50993 1020 aa12.43□□□□□ -0.42
CLSTN3-208ENST00000538933 TERF1P54274 439 aa12.43□□□□□ -0.42
CLSTN3-208ENST00000538933 BASP1P80723 227 aaKnown RBP12.43□□□□□ -0.42
CLSTN3-208ENST00000538933 MRPS25P82663 173 aaKnown RBP12.43□□□□□ -0.42
CLSTN3-208ENST00000538933 SLC10A7Q0GE19 358 aa12.43□□□□□ -0.42
CLSTN3-208ENST00000538933 GPS1Q13098 491 aa12.43□□□□□ -0.42
CLSTN3-208ENST00000538933 PTK6Q13882 451 aa12.43□□□□□ -0.42
CLSTN3-208ENST00000538933 TCEA2Q15560 299 aa12.43□□□□□ -0.42
CLSTN3-208ENST00000538933 LACTB2Q53H82 288 aaPredicted RBP12.43□□□□□ -0.42
CLSTN3-208ENST00000538933 INO80DQ53TQ3 878 aaPredicted RBP12.43□□□□□ -0.42
CLSTN3-208ENST00000538933 PHF19Q5T6S3 580 aa12.43□□□□□ -0.42
CLSTN3-208ENST00000538933 FHL5Q5TD97 284 aa12.43□□□□□ -0.42
CLSTN3-208ENST00000538933 KCTD16Q68DU8 428 aa12.43□□□□□ -0.42
CLSTN3-208ENST00000538933 HID1Q8IV36 788 aa12.43□□□□□ -0.42
CLSTN3-208ENST00000538933 ZNF567Q8N184 647 aa12.43□□□□□ -0.42
CLSTN3-208ENST00000538933 TP53I13Q8NBR0 393 aaPredicted RBP12.43□□□□□ -0.42
CLSTN3-208ENST00000538933 MAML1Q92585 1016 aa12.43□□□□□ -0.42
CLSTN3-208ENST00000538933 SLCO2A1Q92959 643 aa12.43□□□□□ -0.42
CLSTN3-208ENST00000538933 PPP1R2P1Q96PQ5 205 aa12.43□□□□□ -0.42
CLSTN3-208ENST00000538933 TAAR9Q96RI9 348 aa12.43□□□□□ -0.42
CLSTN3-208ENST00000538933 HEPHQ9BQS7 1158 aa12.43□□□□□ -0.42
CLSTN3-208ENST00000538933 RHOXF2Q9BQY4 288 aa12.43□□□□□ -0.42
CLSTN3-208ENST00000538933 TRIM51Q9BSJ1 452 aa12.43□□□□□ -0.42
CLSTN3-208ENST00000538933 SPRY4Q9C004 299 aa12.43□□□□□ -0.42
CLSTN3-208ENST00000538933 POLR1EQ9GZS1 481 aaKnown RBP12.43□□□□□ -0.42
CLSTN3-208ENST00000538933 PDFQ9HBH1 243 aa12.43□□□□□ -0.42
CLSTN3-208ENST00000538933 DOLKQ9UPQ8 538 aa12.43□□□□□ -0.42
CLSTN3-208ENST00000538933 FCF1Q9Y324 198 aaKnown RBP12.43□□□□□ -0.42
CLSTN3-208ENST00000538933 ACTL7AQ9Y615 435 aa12.43□□□□□ -0.42
CLSTN3-208ENST00000538933 CSMD2Q7Z408 3487 aa12.43□□□□□ -0.42
CLSTN3-208ENST00000538933 DCHS2Q6V1P9 2916 aa12.42□□□□□ -0.42
CLSTN3-208ENST00000538933 CXorf51AA0A1B0GTR3 108 aa12.42□□□□□ -0.42
CLSTN3-208ENST00000538933 C16orf96A6NNT2 1141 aa12.42□□□□□ -0.42
CLSTN3-208ENST00000538933 F5H423 210 aaPredicted RBP12.42□□□□□ -0.42
CLSTN3-208ENST00000538933 PRKCGP05129 697 aa12.42□□□□□ -0.42
CLSTN3-208ENST00000538933 HLA-DQB2P05538 268 aa12.42□□□□□ -0.42
CLSTN3-208ENST00000538933 ZSCAN5DPP0CG00 497 aa12.42□□□□□ -0.42
CLSTN3-208ENST00000538933 FDFT1P37268 417 aa12.42□□□□□ -0.42
CLSTN3-208ENST00000538933 BLKP51451 505 aa12.42□□□□□ -0.42
CLSTN3-208ENST00000538933 CCNHP51946 323 aaPredicted RBP12.42□□□□□ -0.42
CLSTN3-208ENST00000538933 SLC7A5Q01650 507 aa12.42□□□□□ -0.42
CLSTN3-208ENST00000538933 CALCOCO2Q13137 446 aa12.42□□□□□ -0.42
CLSTN3-208ENST00000538933 CARD16Q5EG05 197 aa12.42□□□□□ -0.42
CLSTN3-208ENST00000538933 PRUNE1Q86TP1 453 aa12.42□□□□□ -0.42
CLSTN3-208ENST00000538933 CACNA2D3Q8IZS8 1091 aa12.42□□□□□ -0.42
CLSTN3-208ENST00000538933 IL22RA1Q8N6P7 574 aa12.42□□□□□ -0.42
CLSTN3-208ENST00000538933 LRRN4CLQ8ND94 238 aa12.42□□□□□ -0.42
CLSTN3-208ENST00000538933 APOBEC4Q8WW27 367 aaKnown RBP12.42□□□□□ -0.42
CLSTN3-208ENST00000538933 RAB7BQ96AH8 199 aa12.42□□□□□ -0.42
CLSTN3-208ENST00000538933 RTP4Q96DX8 246 aa12.42□□□□□ -0.42
CLSTN3-208ENST00000538933 TEKT5Q96M29 485 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms