RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 UGT1A4P22310 534 aa13.54□□□□□ -0.24
CD9-208ENST00000538834 UGT1A3P35503 534 aa13.54□□□□□ -0.24
CD9-208ENST00000538834 UGT1A5P35504 534 aa13.54□□□□□ -0.24
CD9-208ENST00000538834 FASLGP48023 281 aa13.54□□□□□ -0.24
CD9-208ENST00000538834 PDX1P52945 283 aa13.54□□□□□ -0.24
CD9-208ENST00000538834 CLDN6P56747 220 aa13.54□□□□□ -0.24
CD9-208ENST00000538834 B4GALNT1Q00973 533 aa13.54□□□□□ -0.24
CD9-208ENST00000538834 TMEM115Q12893 351 aaPredicted RBP13.54□□□□□ -0.24
CD9-208ENST00000538834 ITGA9Q13797 1035 aa13.54□□□□□ -0.24
CD9-208ENST00000538834 RTP5Q14D33 572 aa13.54□□□□□ -0.24
CD9-208ENST00000538834 LONRF2Q1L5Z9 754 aa13.54□□□□□ -0.24
CD9-208ENST00000538834 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.54□□□□□ -0.24
CD9-208ENST00000538834 DOK6Q6PKX4 331 aa13.54□□□□□ -0.24
CD9-208ENST00000538834 MARCH9Q86YJ5 346 aa13.54□□□□□ -0.24
CD9-208ENST00000538834 GALNT13Q8IUC8 556 aa13.54□□□□□ -0.24
CD9-208ENST00000538834 PHYKPLQ8IUZ5 450 aa13.54□□□□□ -0.24
CD9-208ENST00000538834 SFRP1Q8N474 314 aa13.54□□□□□ -0.24
CD9-208ENST00000538834 WDR48Q8TAF3 677 aa13.54□□□□□ -0.24
CD9-208ENST00000538834 ZNF398Q8TD17 642 aa13.54□□□□□ -0.24
CD9-208ENST00000538834 SGSM3Q96HU1 749 aa13.54□□□□□ -0.24
CD9-208ENST00000538834 TIMM29Q9BSF4 260 aa13.54□□□□□ -0.24
CD9-208ENST00000538834 OR2AG1Q9H205 316 aa13.54□□□□□ -0.24
CD9-208ENST00000538834 UGT1A7Q9HAW7 530 aa13.54□□□□□ -0.24
CD9-208ENST00000538834 UGT1A10Q9HAW8 530 aa13.54□□□□□ -0.24
CD9-208ENST00000538834 UGT1A8Q9HAW9 530 aa13.54□□□□□ -0.24
CD9-208ENST00000538834 PKP3Q9Y446 797 aa13.54□□□□□ -0.24
CD9-208ENST00000538834 DNMT3AQ9Y6K1 912 aaPredicted RBP13.54□□□□□ -0.24
CD9-208ENST00000538834 CELSR3Q9NYQ7 3312 aa13.54□□□□□ -0.24
CD9-208ENST00000538834 CACNA1BQ00975 2339 aa13.54□□□□□ -0.24
CD9-208ENST00000538834 A0A1W2PNU3 283 aaPredicted RBP13.53□□□□□ -0.24
CD9-208ENST00000538834 SNRNP200O75643 2136 aaKnown RBP13.53□□□□□ -0.24
CD9-208ENST00000538834 TCEA3O75764 348 aa13.53□□□□□ -0.24
CD9-208ENST00000538834 SRP72O76094 671 aaKnown RBP13.53□□□□□ -0.24
CD9-208ENST00000538834 ASMTLO95671 621 aa13.53□□□□□ -0.24
CD9-208ENST00000538834 MT-CO3P00414 261 aa13.53□□□□□ -0.24
CD9-208ENST00000538834 TPH1P17752 444 aa13.53□□□□□ -0.24
CD9-208ENST00000538834 HADHAP40939 763 aa13.53□□□□□ -0.24
CD9-208ENST00000538834 TNNT3P45378 269 aaPredicted RBP13.53□□□□□ -0.24
CD9-208ENST00000538834 DMPKQ09013 629 aa13.53□□□□□ -0.24
CD9-208ENST00000538834 CDH17Q12864 832 aa13.53□□□□□ -0.24
CD9-208ENST00000538834 TARDBPQ13148 414 aaKnown RBP eCLIP13.53□□□□□ -0.24
CD9-208ENST00000538834 NFATC2Q13469 925 aa13.53□□□□□ -0.24
CD9-208ENST00000538834 ZNF658BQ4V348 819 aaPredicted RBP13.53□□□□□ -0.24
CD9-208ENST00000538834 LDLRAP1Q5SW96 308 aa13.53□□□□□ -0.24
CD9-208ENST00000538834 GPRC6AQ5T6X5 926 aa13.53□□□□□ -0.24
CD9-208ENST00000538834 IYDQ6PHW0 289 aa13.53□□□□□ -0.24
CD9-208ENST00000538834 UNQ6494/PRO21346Q6UXR6 183 aa13.53□□□□□ -0.24
CD9-208ENST00000538834 WASH2PQ6VEQ5 465 aa13.53□□□□□ -0.24
CD9-208ENST00000538834 ZNF534Q76KX8 674 aa13.53□□□□□ -0.24
CD9-208ENST00000538834 ARL14Q8N4G2 192 aa13.53□□□□□ -0.24
CD9-208ENST00000538834 OR52K1Q8NGK4 314 aa13.53□□□□□ -0.24
CD9-208ENST00000538834 ZDHHC1Q8WTX9 485 aa13.53□□□□□ -0.24
CD9-208ENST00000538834 STYXQ8WUJ0 223 aa13.53□□□□□ -0.24
CD9-208ENST00000538834 PATE1Q8WXA2 126 aa13.53□□□□□ -0.24
CD9-208ENST00000538834 ANP32BQ92688 251 aaKnown RBP13.53□□□□□ -0.24
CD9-208ENST00000538834 PEX13Q92968 403 aa13.53□□□□□ -0.24
CD9-208ENST00000538834 CDKN2AIPNLQ96HQ2 116 aa13.53□□□□□ -0.24
CD9-208ENST00000538834 CCDC3Q9BQI4 270 aa13.53□□□□□ -0.24
CD9-208ENST00000538834 NRSN2Q9GZP1 204 aa13.53□□□□□ -0.24
CD9-208ENST00000538834 ARFGAP3Q9NP61 516 aa13.53□□□□□ -0.24
CD9-208ENST00000538834 WASH6PQ9NQA3 447 aa13.53□□□□□ -0.24
CD9-208ENST00000538834 TBC1D29Q9UFV1 150 aa13.53□□□□□ -0.24
CD9-208ENST00000538834 FKBPLQ9UIM3 349 aa13.53□□□□□ -0.24
CD9-208ENST00000538834 MOSPD1Q9UJG1 213 aa13.53□□□□□ -0.24
CD9-208ENST00000538834 DOLKQ9UPQ8 538 aa13.53□□□□□ -0.24
CD9-208ENST00000538834 CLCA2Q9UQC9 943 aa13.53□□□□□ -0.24
CD9-208ENST00000538834 GPSM3Q9Y4H4 160 aa13.53□□□□□ -0.24
CD9-208ENST00000538834 RNF215Q9Y6U7 377 aa13.53□□□□□ -0.24
CD9-208ENST00000538834 DSPP15924 2871 aaKnown RBP13.53□□□□□ -0.24
CD9-208ENST00000538834 ADAMTS20P59510 1910 aa13.52□□□□□ -0.24
CD9-208ENST00000538834 CPED1A4D0V7 1026 aa13.52□□□□□ -0.25
CD9-208ENST00000538834 FAM149AA5PLN7 773 aa13.52□□□□□ -0.25
CD9-208ENST00000538834 TMEM8BA6NDV4 472 aa13.52□□□□□ -0.25
CD9-208ENST00000538834 KMOO15229 486 aa13.52□□□□□ -0.25
CD9-208ENST00000538834 PPM1DO15297 605 aa13.52□□□□□ -0.25
CD9-208ENST00000538834 B4GAT1O43505 415 aa13.52□□□□□ -0.25
CD9-208ENST00000538834 KIF5CO60282 957 aa13.52□□□□□ -0.25
CD9-208ENST00000538834 KCNJ13O60928 360 aa13.52□□□□□ -0.25
CD9-208ENST00000538834 MTX2O75431 263 aa13.52□□□□□ -0.25
CD9-208ENST00000538834 CDK14O94921 469 aa13.52□□□□□ -0.25
CD9-208ENST00000538834 PRAMEF1O95521 474 aa13.52□□□□□ -0.25
CD9-208ENST00000538834 ECEL1O95672 775 aa13.52□□□□□ -0.25
CD9-208ENST00000538834 IFNB1P01574 187 aa13.52□□□□□ -0.25
CD9-208ENST00000538834 SLC4A1P02730 911 aa13.52□□□□□ -0.25
CD9-208ENST00000538834 ZNF7P17097 686 aaPredicted RBP13.52□□□□□ -0.25
CD9-208ENST00000538834 TPSB2P20231 275 aa13.52□□□□□ -0.25
CD9-208ENST00000538834 COILP38432 576 aaPredicted RBP13.52□□□□□ -0.25
CD9-208ENST00000538834 ACTR1BP42025 376 aa13.52□□□□□ -0.25
CD9-208ENST00000538834 GPR3P46089 330 aa13.52□□□□□ -0.25
CD9-208ENST00000538834 CTSCP53634 463 aa13.52□□□□□ -0.25
CD9-208ENST00000538834 ACTR1AP61163 376 aa13.52□□□□□ -0.25
CD9-208ENST00000538834 CDK16Q00536 496 aa13.52□□□□□ -0.25
CD9-208ENST00000538834 CCDC173Q0VFZ6 552 aa13.52□□□□□ -0.25
CD9-208ENST00000538834 KCNJ11Q14654 390 aa13.52□□□□□ -0.25
CD9-208ENST00000538834 TCEA2Q15560 299 aa13.52□□□□□ -0.25
CD9-208ENST00000538834 TPSAB1Q15661 275 aa13.52□□□□□ -0.25
CD9-208ENST00000538834 GPR33Q49SQ1 333 aa13.52□□□□□ -0.25
CD9-208ENST00000538834 SLC30A9Q6PML9 568 aa13.52□□□□□ -0.25
CD9-208ENST00000538834 IGF2-ASQ6U949 168 aa13.52□□□□□ -0.25
CD9-208ENST00000538834 ABRAXAS1Q6UWZ7 409 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms