RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 LCP2Q13094 533 aa6.87□□□□□ -1.31
SORT1-209ENST00000538502 ZNF234Q14588 700 aa6.87□□□□□ -1.31
SORT1-209ENST00000538502 ZNF697Q5TEC3 545 aa6.87□□□□□ -1.31
SORT1-209ENST00000538502 GALNT5Q7Z7M9 940 aa6.87□□□□□ -1.31
SORT1-209ENST00000538502 GALNT12Q8IXK2 581 aa6.87□□□□□ -1.31
SORT1-209ENST00000538502 NR4A3Q92570 626 aa6.87□□□□□ -1.31
SORT1-209ENST00000538502 FAM84AQ96KN4 292 aa6.87□□□□□ -1.31
SORT1-209ENST00000538502 NEDD4LQ96PU5 975 aa6.87□□□□□ -1.31
SORT1-209ENST00000538502 SLC4A9Q96Q91 983 aa6.87□□□□□ -1.31
SORT1-209ENST00000538502 BCL7BQ9BQE9 202 aa6.87□□□□□ -1.31
SORT1-209ENST00000538502 COMMD4Q9H0A8 199 aa6.87□□□□□ -1.31
SORT1-209ENST00000538502 ASB8Q9H765 288 aa6.87□□□□□ -1.31
SORT1-209ENST00000538502 ATP13A3Q9H7F0 1226 aa6.87□□□□□ -1.31
SORT1-209ENST00000538502 PCDH18Q9HCL0 1135 aa6.87□□□□□ -1.31
SORT1-209ENST00000538502 ZFP14Q9HCL3 533 aa6.87□□□□□ -1.31
SORT1-209ENST00000538502 INTS7Q9NVH2 962 aaKnown RBP6.87□□□□□ -1.31
SORT1-209ENST00000538502 AXIN2Q9Y2T1 843 aa6.87□□□□□ -1.31
SORT1-209ENST00000538502 MAB21L2Q9Y586 359 aa6.87□□□□□ -1.31
SORT1-209ENST00000538502 CXCR6O00574 342 aa6.87□□□□□ -1.31
SORT1-209ENST00000538502 C2P06681 752 aa6.87□□□□□ -1.31
SORT1-209ENST00000538502 RBBP4Q09028 425 aa6.87□□□□□ -1.31
SORT1-209ENST00000538502 ZNF311Q5JNZ3 666 aa6.87□□□□□ -1.31
SORT1-209ENST00000538502 LDLRAP1Q5SW96 308 aa6.87□□□□□ -1.31
SORT1-209ENST00000538502 TAPT1Q6NXT6 567 aa6.87□□□□□ -1.31
SORT1-209ENST00000538502 ZNF730Q6ZMV8 503 aa6.87□□□□□ -1.31
SORT1-209ENST00000538502 CLEC10AQ8IUN9 316 aa6.87□□□□□ -1.31
SORT1-209ENST00000538502 SPOCK2Q92563 424 aa6.87□□□□□ -1.31
SORT1-209ENST00000538502 LENG8Q96PV6 779 aaPredicted RBP6.87□□□□□ -1.31
SORT1-209ENST00000538502 NFKBIZQ9BYH8 718 aa6.87□□□□□ -1.31
SORT1-209ENST00000538502 ELP3Q9H9T3 547 aa6.87□□□□□ -1.31
SORT1-209ENST00000538502 POLR3BQ9NW08 1133 aaPredicted RBP6.87□□□□□ -1.31
SORT1-209ENST00000538502 SNTG2Q9NY99 539 aa6.87□□□□□ -1.31
SORT1-209ENST00000538502 GRHL1Q9NZI5 618 aa6.87□□□□□ -1.31
SORT1-209ENST00000538502 TDRKHQ9Y2W6 561 aaKnown RBP6.87□□□□□ -1.31
SORT1-209ENST00000538502 A0A1W2PQ67 120 aa6.87□□□□□ -1.31
SORT1-209ENST00000538502 ANKRD63C9JTQ0 380 aa6.87□□□□□ -1.31
SORT1-209ENST00000538502 UBE2Q2LH0YL09 131 aa6.87□□□□□ -1.31
SORT1-209ENST00000538502 CCRL2O00421 344 aa6.87□□□□□ -1.31
SORT1-209ENST00000538502 KERAO60938 352 aa6.87□□□□□ -1.31
SORT1-209ENST00000538502 CD36P16671 472 aa6.87□□□□□ -1.31
SORT1-209ENST00000538502 NELFEP18615 380 aaKnown RBP6.87□□□□□ -1.31
SORT1-209ENST00000538502 MARCKSL1P49006 195 aa6.87□□□□□ -1.31
SORT1-209ENST00000538502 TUFMP49411 452 aaKnown RBP6.87□□□□□ -1.31
SORT1-209ENST00000538502 TAS2R40P59535 323 aa6.87□□□□□ -1.31
SORT1-209ENST00000538502 DCDC1P59894 354 aa6.87□□□□□ -1.31
SORT1-209ENST00000538502 TIGD2Q4W5G0 525 aa6.87□□□□□ -1.31
SORT1-209ENST00000538502 FAM171BQ6P995 826 aa6.87□□□□□ -1.31
SORT1-209ENST00000538502 RFWD3Q6PCD5 774 aa6.87□□□□□ -1.31
SORT1-209ENST00000538502 ZNF613Q6PF04 617 aa6.87□□□□□ -1.31
SORT1-209ENST00000538502 ZNF773Q6PK81 442 aa6.87□□□□□ -1.31
SORT1-209ENST00000538502 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.87□□□□□ -1.31
SORT1-209ENST00000538502 FAM129BQ96TA1 746 aa6.87□□□□□ -1.31
SORT1-209ENST00000538502 C2orf49Q9BVC5 232 aaPredicted RBP6.87□□□□□ -1.31
SORT1-209ENST00000538502 XKR8Q9H6D3 395 aa6.87□□□□□ -1.31
SORT1-209ENST00000538502 ERVK-5Q9HDB9 667 aa6.87□□□□□ -1.31
SORT1-209ENST00000538502 KCTD5Q9NXV2 234 aa6.87□□□□□ -1.31
SORT1-209ENST00000538502 STXBP5LQ9Y2K9 1186 aa6.87□□□□□ -1.31
SORT1-209ENST00000538502 KCNE2Q9Y6J6 123 aa6.87□□□□□ -1.31
SORT1-209ENST00000538502 FAM86B1E9PN63 330 aa6.87□□□□□ -1.31
SORT1-209ENST00000538502 H7C2Y5 167 aa6.87□□□□□ -1.31
SORT1-209ENST00000538502 TBX1O43435 398 aa6.87□□□□□ -1.31
SORT1-209ENST00000538502 NDUFB5O43674 189 aa6.87□□□□□ -1.31
SORT1-209ENST00000538502 SLC19A2O60779 497 aa6.87□□□□□ -1.31
SORT1-209ENST00000538502 BANF1O75531 89 aa6.87□□□□□ -1.31
SORT1-209ENST00000538502 TRBC1P01850 177 aa6.87□□□□□ -1.31
SORT1-209ENST00000538502 AOC1P19801 751 aa6.87□□□□□ -1.31
SORT1-209ENST00000538502 SLC15A1P46059 708 aa6.87□□□□□ -1.31
SORT1-209ENST00000538502 BTN3A2P78410 334 aa6.87□□□□□ -1.31
SORT1-209ENST00000538502 GRB14Q14449 540 aa6.87□□□□□ -1.31
SORT1-209ENST00000538502 IFI44LQ53G44 452 aa6.87□□□□□ -1.31
SORT1-209ENST00000538502 TPRG1LQ5T0D9 272 aa6.87□□□□□ -1.31
SORT1-209ENST00000538502 ULK3Q6PHR2 472 aa6.87□□□□□ -1.31
SORT1-209ENST00000538502 CHSY3Q70JA7 882 aa6.87□□□□□ -1.31
SORT1-209ENST00000538502 RNF180Q86T96 592 aa6.87□□□□□ -1.31
SORT1-209ENST00000538502 SMG8Q8ND04 991 aaKnown RBP6.87□□□□□ -1.31
SORT1-209ENST00000538502 EDEM1Q92611 657 aa6.87□□□□□ -1.31
SORT1-209ENST00000538502 SLC38A4Q969I6 547 aa6.87□□□□□ -1.31
SORT1-209ENST00000538502 OMDQ99983 421 aa6.87□□□□□ -1.31
SORT1-209ENST00000538502 KCNS3Q9BQ31 491 aa6.87□□□□□ -1.31
SORT1-209ENST00000538502 ZNF490Q9ULM2 529 aaPredicted RBP6.87□□□□□ -1.31
SORT1-209ENST00000538502 SETD1BQ9UPS6 1966 aaKnown RBP6.87□□□□□ -1.31
SORT1-209ENST00000538502 OR2AT4A6NND4 320 aa6.87□□□□□ -1.31
SORT1-209ENST00000538502 AP2A1O95782 977 aa6.87□□□□□ -1.31
SORT1-209ENST00000538502 URODP06132 367 aa6.87□□□□□ -1.31
SORT1-209ENST00000538502 IL1R1P14778 569 aa6.87□□□□□ -1.31
SORT1-209ENST00000538502 PTPN1P18031 435 aaKnown RBP6.87□□□□□ -1.31
SORT1-209ENST00000538502 CREMQ03060 361 aa6.87□□□□□ -1.31
SORT1-209ENST00000538502 SRSF11Q05519 484 aaKnown RBP6.87□□□□□ -1.31
SORT1-209ENST00000538502 MBTD1Q05BQ5 628 aa6.87□□□□□ -1.31
SORT1-209ENST00000538502 LARS2Q15031 903 aaKnown RBP6.87□□□□□ -1.31
SORT1-209ENST00000538502 SMU1Q2TAY7 513 aa6.87□□□□□ -1.31
SORT1-209ENST00000538502 IQCCQ4KMZ1 466 aa6.87□□□□□ -1.31
SORT1-209ENST00000538502 HGSNATQ68CP4 663 aa6.87□□□□□ -1.31
SORT1-209ENST00000538502 USP30Q70CQ3 517 aa6.87□□□□□ -1.31
SORT1-209ENST00000538502 CPT1BQ92523 772 aa6.87□□□□□ -1.31
SORT1-209ENST00000538502 FDXACB1Q9BRP7 624 aaPredicted RBP6.87□□□□□ -1.31
SORT1-209ENST00000538502 LRRC3Q9BY71 257 aa6.87□□□□□ -1.31
SORT1-209ENST00000538502 SDCBP2Q9H190 292 aa6.87□□□□□ -1.31
SORT1-209ENST00000538502 MMP27Q9H306 513 aa6.87□□□□□ -1.31
SORT1-209ENST00000538502 USP29Q9HBJ7 922 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms