RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 CHUKO15111 745 aa12.94□□□□□ -0.34
CHFR-216ENST00000538235 AQP9O43315 295 aa12.94□□□□□ -0.34
CHFR-216ENST00000538235 SIGLEC6O43699 453 aa12.94□□□□□ -0.34
CHFR-216ENST00000538235 MAGEC1O60732 1142 aa12.94□□□□□ -0.34
CHFR-216ENST00000538235 RASGRP1O95267 797 aa12.94□□□□□ -0.34
CHFR-216ENST00000538235 GOT2P00505 430 aaKnown RBP12.94□□□□□ -0.34
CHFR-216ENST00000538235 ARCN1P48444 511 aaKnown RBP12.94□□□□□ -0.34
CHFR-216ENST00000538235 CDK16Q00536 496 aa12.94□□□□□ -0.34
CHFR-216ENST00000538235 DHX9Q08211 1270 aaKnown RBP12.94□□□□□ -0.34
CHFR-216ENST00000538235 PTK2BQ14289 1009 aa12.94□□□□□ -0.34
CHFR-216ENST00000538235 PROX2Q3B8N5 592 aa12.94□□□□□ -0.34
CHFR-216ENST00000538235 ZNF658BQ4V348 819 aaPredicted RBP12.94□□□□□ -0.34
CHFR-216ENST00000538235 PCID2Q5JVF3 399 aa12.94□□□□□ -0.34
CHFR-216ENST00000538235 HP1BP3Q5SSJ5 553 aaPredicted RBP12.94□□□□□ -0.34
CHFR-216ENST00000538235 CRTC3Q6UUV7 619 aa12.94□□□□□ -0.34
CHFR-216ENST00000538235 NXPE1Q8N323 547 aa12.94□□□□□ -0.34
CHFR-216ENST00000538235 BEND7Q8N7W2 519 aaPredicted RBP12.94□□□□□ -0.34
CHFR-216ENST00000538235 ZNF398Q8TD17 642 aa12.94□□□□□ -0.34
CHFR-216ENST00000538235 LKAAEAR1Q8TD35 194 aa12.94□□□□□ -0.34
CHFR-216ENST00000538235 CARD6Q9BX69 1037 aa12.94□□□□□ -0.34
CHFR-216ENST00000538235 ASB8Q9H765 288 aa12.94□□□□□ -0.34
CHFR-216ENST00000538235 KCTD5Q9NXV2 234 aa12.94□□□□□ -0.34
CHFR-216ENST00000538235 VPS18Q9P253 973 aa12.94□□□□□ -0.34
CHFR-216ENST00000538235 SLC17A6Q9P2U8 582 aa12.94□□□□□ -0.34
CHFR-216ENST00000538235 MOSPD1Q9UJG1 213 aa12.94□□□□□ -0.34
CHFR-216ENST00000538235 CDV3Q9UKY7 258 aaKnown RBP12.94□□□□□ -0.34
CHFR-216ENST00000538235 FAM187AA6NFU0 413 aa12.93□□□□□ -0.34
CHFR-216ENST00000538235 YY2O15391 372 aa12.93□□□□□ -0.34
CHFR-216ENST00000538235 NUAK1O60285 661 aa12.93□□□□□ -0.34
CHFR-216ENST00000538235 ZNF500O60304 480 aaPredicted RBP12.93□□□□□ -0.34
CHFR-216ENST00000538235 SLC25A14O95258 325 aaPredicted RBP12.93□□□□□ -0.34
CHFR-216ENST00000538235 MLNP12872 115 aa12.93□□□□□ -0.34
CHFR-216ENST00000538235 ECHS1P30084 290 aa12.93□□□□□ -0.34
CHFR-216ENST00000538235 TNNT3P45378 269 aaPredicted RBP12.93□□□□□ -0.34
CHFR-216ENST00000538235 ARRB1P49407 418 aaPredicted RBP12.93□□□□□ -0.34
CHFR-216ENST00000538235 CLDN6P56747 220 aa12.93□□□□□ -0.34
CHFR-216ENST00000538235 ARHGAP8P85298 464 aa12.93□□□□□ -0.34
CHFR-216ENST00000538235 CTBSQ01459 385 aa12.93□□□□□ -0.34
CHFR-216ENST00000538235 DNAJC3Q13217 504 aa12.93□□□□□ -0.34
CHFR-216ENST00000538235 KIF26BQ2KJY2 2108 aa12.93□□□□□ -0.34
CHFR-216ENST00000538235 PDPK2PQ6A1A2 396 aa12.93□□□□□ -0.34
CHFR-216ENST00000538235 FAM83HQ6ZRV2 1179 aaPredicted RBP12.93□□□□□ -0.34
CHFR-216ENST00000538235 SYDE1Q6ZW31 735 aaPredicted RBP12.93□□□□□ -0.34
CHFR-216ENST00000538235 DET1Q7L5Y6 550 aa12.93□□□□□ -0.34
CHFR-216ENST00000538235 SERPINA9Q86WD7 417 aa12.93□□□□□ -0.34
CHFR-216ENST00000538235 PHYKPLQ8IUZ5 450 aa12.93□□□□□ -0.34
CHFR-216ENST00000538235 SLC35F3Q8IY50 421 aa12.93□□□□□ -0.34
CHFR-216ENST00000538235 MMGT1Q8N4V1 131 aa12.93□□□□□ -0.34
CHFR-216ENST00000538235 OXR1Q8N573 874 aa12.93□□□□□ -0.34
CHFR-216ENST00000538235 LILRA3Q8N6C8 439 aaPredicted RBP12.93□□□□□ -0.34
CHFR-216ENST00000538235 KYQ8NBH2 561 aa12.93□□□□□ -0.34
CHFR-216ENST00000538235 PPHLN1Q8NEY8 458 aaKnown RBP12.93□□□□□ -0.34
CHFR-216ENST00000538235 OR4C6Q8NH72 309 aa12.93□□□□□ -0.34
CHFR-216ENST00000538235 KIF18AQ8NI77 898 aa12.93□□□□□ -0.34
CHFR-216ENST00000538235 SKA1Q96BD8 255 aa12.93□□□□□ -0.34
CHFR-216ENST00000538235 SNF8Q96H20 258 aa12.93□□□□□ -0.34
CHFR-216ENST00000538235 OR2M4Q96R27 311 aa12.93□□□□□ -0.34
CHFR-216ENST00000538235 C19orf43Q9BQ61 176 aa12.93□□□□□ -0.34
CHFR-216ENST00000538235 ERP44Q9BS26 406 aa12.93□□□□□ -0.34
CHFR-216ENST00000538235 IL22Q9GZX6 179 aa12.93□□□□□ -0.34
CHFR-216ENST00000538235 CDH19Q9H159 772 aa12.93□□□□□ -0.34
CHFR-216ENST00000538235 MRM3Q9HC36 420 aaKnown RBP12.93□□□□□ -0.34
CHFR-216ENST00000538235 SPATS2LQ9NUQ6 558 aaKnown RBP12.93□□□□□ -0.34
CHFR-216ENST00000538235 RIMKLBQ9ULI2 386 aa12.93□□□□□ -0.34
CHFR-216ENST00000538235 KCNK6Q9Y257 313 aa12.93□□□□□ -0.34
CHFR-216ENST00000538235 AKAP13Q12802 2813 aa12.92□□□□□ -0.34
CHFR-216ENST00000538235 A6NCN8 305 aa12.92□□□□□ -0.34
CHFR-216ENST00000538235 OR2AG2A6NM03 316 aa12.92□□□□□ -0.34
CHFR-216ENST00000538235 KIF2AO00139 706 aaPredicted RBP12.92□□□□□ -0.34
CHFR-216ENST00000538235 FLRT2O43155 660 aa12.92□□□□□ -0.34
CHFR-216ENST00000538235 NOBOXO60393 691 aa12.92□□□□□ -0.34
CHFR-216ENST00000538235 OR1I1O60431 355 aa12.92□□□□□ -0.34
CHFR-216ENST00000538235 FOXD2O60548 495 aaPredicted RBP12.92□□□□□ -0.34
CHFR-216ENST00000538235 PPFIA2O75334 1257 aa12.92□□□□□ -0.34
CHFR-216ENST00000538235 ASMTLO95671 621 aa12.92□□□□□ -0.34
CHFR-216ENST00000538235 ACP5P13686 325 aa12.92□□□□□ -0.34
CHFR-216ENST00000538235 ACRV1P26436 265 aa12.92□□□□□ -0.34
CHFR-216ENST00000538235 HTR1BP28222 390 aa12.92□□□□□ -0.34
CHFR-216ENST00000538235 NPY2RP49146 381 aa12.92□□□□□ -0.34
CHFR-216ENST00000538235 HNRNPKP61978 463 aaKnown RBP eCLIP12.92□□□□□ -0.34
CHFR-216ENST00000538235 CKAP4Q07065 602 aaKnown RBP12.92□□□□□ -0.34
CHFR-216ENST00000538235 SLC14A1Q13336 389 aa12.92□□□□□ -0.34
CHFR-216ENST00000538235 MORF4L2Q15014 288 aa12.92□□□□□ -0.34
CHFR-216ENST00000538235 ZRANB3Q5FWF4 1079 aa12.92□□□□□ -0.34
CHFR-216ENST00000538235 ZNF789Q5FWF6 425 aa12.92□□□□□ -0.34
CHFR-216ENST00000538235 SNX20Q7Z614 316 aa12.92□□□□□ -0.34
CHFR-216ENST00000538235 TMEM135Q86UB9 458 aa12.92□□□□□ -0.34
CHFR-216ENST00000538235 HOOK3Q86VS8 718 aa12.92□□□□□ -0.34
CHFR-216ENST00000538235 GPBAR1Q8TDU6 330 aa12.92□□□□□ -0.34
CHFR-216ENST00000538235 SEC14L1Q92503 715 aa12.92□□□□□ -0.34
CHFR-216ENST00000538235 ZNF669Q96BR6 464 aaPredicted RBP12.92□□□□□ -0.34
CHFR-216ENST00000538235 LRRC45Q96CN5 670 aa12.92□□□□□ -0.34
CHFR-216ENST00000538235 L2HGDHQ9H9P8 463 aa12.92□□□□□ -0.34
CHFR-216ENST00000538235 TRIM39Q9HCM9 518 aa12.92□□□□□ -0.34
CHFR-216ENST00000538235 XAB2Q9HCS7 855 aaKnown RBP12.92□□□□□ -0.34
CHFR-216ENST00000538235 RAD18Q9NS91 495 aa12.92□□□□□ -0.34
CHFR-216ENST00000538235 RABGEF1Q9UJ41 708 aa12.92□□□□□ -0.34
CHFR-216ENST00000538235 SNRNP200O75643 2136 aaKnown RBP12.91□□□□□ -0.34
CHFR-216ENST00000538235 PRAMEF33A0A0G2JMD5 474 aa12.91□□□□□ -0.34
CHFR-216ENST00000538235 E7ESA3 106 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms