RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 THAP10Q9P2Z0 257 aaPredicted RBP7.17□□□□□ -1.26
MSH6-209ENST00000538136 APPL1Q9UKG1 709 aa7.17□□□□□ -1.26
MSH6-209ENST00000538136 GPR34Q9UPC5 381 aa7.17□□□□□ -1.26
MSH6-209ENST00000538136 ZNF860A6NHJ4 632 aa7.17□□□□□ -1.26
MSH6-209ENST00000538136 SAP18O00422 153 aaKnown RBP7.17□□□□□ -1.26
MSH6-209ENST00000538136 ADH1BP00325 375 aa7.17□□□□□ -1.26
MSH6-209ENST00000538136 MYBL2P10244 700 aa7.17□□□□□ -1.26
MSH6-209ENST00000538136 BRAFP15056 766 aa7.17□□□□□ -1.26
MSH6-209ENST00000538136 HNRNPA2B1P22626 353 aaKnown RBP7.17□□□□□ -1.26
MSH6-209ENST00000538136 MAGOHP61326 146 aaKnown RBP7.17□□□□□ -1.26
MSH6-209ENST00000538136 RPS14P62263 151 aaKnown RBP7.17□□□□□ -1.26
MSH6-209ENST00000538136 PTK6Q13882 451 aa7.17□□□□□ -1.26
MSH6-209ENST00000538136 DPYSQ14117 519 aa7.17□□□□□ -1.26
MSH6-209ENST00000538136 TTLL9Q3SXZ7 439 aa7.17□□□□□ -1.26
MSH6-209ENST00000538136 PCID2Q5JVF3 399 aa7.17□□□□□ -1.26
MSH6-209ENST00000538136 C9orf64Q5T6V5 341 aa7.17□□□□□ -1.26
MSH6-209ENST00000538136 PSAPL1Q6NUJ1 521 aa7.17□□□□□ -1.26
MSH6-209ENST00000538136 BHLHA9Q7RTU4 235 aa7.17□□□□□ -1.26
MSH6-209ENST00000538136 TRIM73Q86UV7 250 aa7.17□□□□□ -1.26
MSH6-209ENST00000538136 RNF168Q8IYW5 571 aaPredicted RBP7.17□□□□□ -1.26
MSH6-209ENST00000538136 MINDY1Q8N5J2 469 aa7.17□□□□□ -1.26
MSH6-209ENST00000538136 AADATQ8N5Z0 425 aa7.17□□□□□ -1.26
MSH6-209ENST00000538136 JADE3Q92613 823 aa7.17□□□□□ -1.26
MSH6-209ENST00000538136 GFM2Q969S9 779 aaKnown RBP7.17□□□□□ -1.26
MSH6-209ENST00000538136 QKIQ96PU8 341 aaKnown RBP eCLIP7.17□□□□□ -1.26
MSH6-209ENST00000538136 MGAMO43451 1857 aa7.17□□□□□ -1.26
MSH6-209ENST00000538136 PRMT5O14744 637 aaPredicted RBP7.17□□□□□ -1.26
MSH6-209ENST00000538136 PPFIA2O75334 1257 aa7.17□□□□□ -1.26
MSH6-209ENST00000538136 CTSLP07711 333 aa7.17□□□□□ -1.26
MSH6-209ENST00000538136 PVRP15151 417 aa7.17□□□□□ -1.26
MSH6-209ENST00000538136 STMN1P16949 149 aa7.17□□□□□ -1.26
MSH6-209ENST00000538136 ADRA1DP25100 572 aa7.17□□□□□ -1.26
MSH6-209ENST00000538136 ANKRD20A4Q4UJ75 823 aa7.17□□□□□ -1.26
MSH6-209ENST00000538136 C3orf38Q5JPI3 329 aa7.17□□□□□ -1.26
MSH6-209ENST00000538136 COLEC12Q5KU26 742 aa7.17□□□□□ -1.26
MSH6-209ENST00000538136 PPP1R15BQ5SWA1 713 aa7.17□□□□□ -1.26
MSH6-209ENST00000538136 C1orf189Q5VU69 101 aa7.17□□□□□ -1.26
MSH6-209ENST00000538136 GPR26Q8NDV2 337 aa7.17□□□□□ -1.26
MSH6-209ENST00000538136 MDM1Q8TC05 714 aa7.17□□□□□ -1.26
MSH6-209ENST00000538136 LINGO1Q96FE5 620 aa7.17□□□□□ -1.26
MSH6-209ENST00000538136 LGR4Q9BXB1 951 aa7.17□□□□□ -1.26
MSH6-209ENST00000538136 SLC2A11Q9BYW1 496 aa7.17□□□□□ -1.26
MSH6-209ENST00000538136 COMMD8Q9NX08 183 aa7.17□□□□□ -1.26
MSH6-209ENST00000538136 SPASTQ9UBP0 616 aa7.17□□□□□ -1.26
MSH6-209ENST00000538136 SMG5Q9UPR3 1016 aaKnown RBP7.17□□□□□ -1.26
MSH6-209ENST00000538136 STARD13Q9Y3M8 1113 aa7.17□□□□□ -1.26
MSH6-209ENST00000538136 TRANK1O15050 2925 aa7.17□□□□□ -1.26
MSH6-209ENST00000538136 HACD1B0YJ81 288 aa7.17□□□□□ -1.26
MSH6-209ENST00000538136 RAD51BO15315 384 aa7.17□□□□□ -1.26
MSH6-209ENST00000538136 ZBTB14O43829 449 aa7.17□□□□□ -1.26
MSH6-209ENST00000538136 ALPPL2P10696 532 aa7.17□□□□□ -1.26
MSH6-209ENST00000538136 HGFP14210 728 aa7.17□□□□□ -1.26
MSH6-209ENST00000538136 KRT4P19013 534 aa7.17□□□□□ -1.26
MSH6-209ENST00000538136 SPRP35270 261 aaPredicted RBP7.17□□□□□ -1.26
MSH6-209ENST00000538136 CCT5P48643 541 aa7.17□□□□□ -1.26
MSH6-209ENST00000538136 ITGA9Q13797 1035 aa7.17□□□□□ -1.26
MSH6-209ENST00000538136 E2F5Q15329 346 aa7.17□□□□□ -1.26
MSH6-209ENST00000538136 WSCD2Q2TBF2 565 aa7.17□□□□□ -1.26
MSH6-209ENST00000538136 RNF187Q5TA31 235 aaPredicted RBP7.17□□□□□ -1.26
MSH6-209ENST00000538136 LIPIQ6XZB0 460 aa7.17□□□□□ -1.26
MSH6-209ENST00000538136 MBOAT1Q6ZNC8 495 aa7.17□□□□□ -1.26
MSH6-209ENST00000538136 RAB42Q8N4Z0 105 aa7.17□□□□□ -1.26
MSH6-209ENST00000538136 ZNF614Q8N883 585 aa7.17□□□□□ -1.26
MSH6-209ENST00000538136 KCTD4Q8WVF5 259 aa7.17□□□□□ -1.26
MSH6-209ENST00000538136 MAML1Q92585 1016 aa7.17□□□□□ -1.26
MSH6-209ENST00000538136 SEMA4BQ9NPR2 832 aaPredicted RBP7.17□□□□□ -1.26
MSH6-209ENST00000538136 TAS2R13Q9NYV9 303 aa7.17□□□□□ -1.26
MSH6-209ENST00000538136 MARCH4Q9P2E8 410 aaPredicted RBP7.17□□□□□ -1.26
MSH6-209ENST00000538136 SLCO1B1Q9Y6L6 691 aa7.17□□□□□ -1.26
MSH6-209ENST00000538136 A0A0J9YYE9 177 aa7.16□□□□□ -1.26
MSH6-209ENST00000538136 FAM95CA0A1B0GW59 222 aa7.16□□□□□ -1.26
MSH6-209ENST00000538136 A8MUA0 341 aa7.16□□□□□ -1.26
MSH6-209ENST00000538136 HSPA4LO95757 839 aa7.16□□□□□ -1.26
MSH6-209ENST00000538136 TNFP01375 233 aa7.16□□□□□ -1.26
MSH6-209ENST00000538136 TRBC1P01850 177 aa7.16□□□□□ -1.26
MSH6-209ENST00000538136 PYGBP11216 843 aa7.16□□□□□ -1.26
MSH6-209ENST00000538136 AOC1P19801 751 aa7.16□□□□□ -1.26
MSH6-209ENST00000538136 EFNA1P20827 205 aaPredicted RBP7.16□□□□□ -1.26
MSH6-209ENST00000538136 FCARP24071 287 aa7.16□□□□□ -1.26
MSH6-209ENST00000538136 VIPR1P32241 457 aa7.16□□□□□ -1.26
MSH6-209ENST00000538136 CD68P34810 354 aaPredicted RBP7.16□□□□□ -1.26
MSH6-209ENST00000538136 ADPRHP54922 357 aa7.16□□□□□ -1.26
MSH6-209ENST00000538136 POU4F1Q01851 419 aa7.16□□□□□ -1.26
MSH6-209ENST00000538136 OCRLQ01968 901 aa7.16□□□□□ -1.26
MSH6-209ENST00000538136 IRF4Q15306 451 aa7.16□□□□□ -1.26
MSH6-209ENST00000538136 MSS51Q4VC12 460 aa7.16□□□□□ -1.26
MSH6-209ENST00000538136 MILR1Q7Z6M3 343 aa7.16□□□□□ -1.26
MSH6-209ENST00000538136 RASGRP3Q8IV61 690 aa7.16□□□□□ -1.26
MSH6-209ENST00000538136 OR2T34Q8NGX1 318 aa7.16□□□□□ -1.26
MSH6-209ENST00000538136 UBE2Q2Q8WVN8 375 aa7.16□□□□□ -1.26
MSH6-209ENST00000538136 CERS2Q96G23 380 aa7.16□□□□□ -1.26
MSH6-209ENST00000538136 FAM111AQ96PZ2 611 aa7.16□□□□□ -1.26
MSH6-209ENST00000538136 PAFAH2Q99487 392 aa7.16□□□□□ -1.26
MSH6-209ENST00000538136 IL22Q9GZX6 179 aa7.16□□□□□ -1.26
MSH6-209ENST00000538136 SRMSQ9H3Y6 488 aa7.16□□□□□ -1.26
MSH6-209ENST00000538136 TMEM74BQ9NUR3 256 aa7.16□□□□□ -1.26
MSH6-209ENST00000538136 HRASLS2Q9NWW9 162 aa7.16□□□□□ -1.26
MSH6-209ENST00000538136 PISDQ9UG56 409 aa7.16□□□□□ -1.26
MSH6-209ENST00000538136 MYO9AB2RTY4 2548 aa7.16□□□□□ -1.26
MSH6-209ENST00000538136 NOTCH4Q99466 2003 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 740.2 ms