RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 APOA4P06727 396 aa10.81□□□□□ -0.68
CLSTN3-207ENST00000537408 CYBAP13498 195 aa10.81□□□□□ -0.68
CLSTN3-207ENST00000537408 ADARB1P78563 741 aaKnown RBP10.81□□□□□ -0.68
CLSTN3-207ENST00000537408 KCNJ11Q14654 390 aa10.81□□□□□ -0.68
CLSTN3-207ENST00000537408 CYP51A1Q16850 503 aa10.81□□□□□ -0.68
CLSTN3-207ENST00000537408 AGKQ53H12 422 aa10.81□□□□□ -0.68
CLSTN3-207ENST00000537408 TPRG1LQ5T0D9 272 aa10.81□□□□□ -0.68
CLSTN3-207ENST00000537408 EFCAB12Q6NXP0 572 aa10.81□□□□□ -0.68
CLSTN3-207ENST00000537408 USP51Q70EK9 711 aa10.81□□□□□ -0.68
CLSTN3-207ENST00000537408 KIF18BQ86Y91 864 aa10.81□□□□□ -0.68
CLSTN3-207ENST00000537408 KCTD6Q8NC69 237 aa10.81□□□□□ -0.68
CLSTN3-207ENST00000537408 SPATA18Q8TC71 538 aa10.81□□□□□ -0.68
CLSTN3-207ENST00000537408 ZFAND1Q8TCF1 268 aa10.81□□□□□ -0.68
CLSTN3-207ENST00000537408 MSANTD3Q96H12 275 aa10.81□□□□□ -0.68
CLSTN3-207ENST00000537408 KAT8Q9H7Z6 458 aaKnown RBP10.81□□□□□ -0.68
CLSTN3-207ENST00000537408 TMEM8AQ9HCN3 771 aa10.81□□□□□ -0.68
CLSTN3-207ENST00000537408 PAK1IP1Q9NWT1 392 aaPredicted RBP10.81□□□□□ -0.68
CLSTN3-207ENST00000537408 EHD3Q9NZN3 535 aa10.81□□□□□ -0.68
CLSTN3-207ENST00000537408 PRORSD1PA6NEY8 169 aa10.81□□□□□ -0.68
CLSTN3-207ENST00000537408 OR6C70A6NIJ9 312 aa10.81□□□□□ -0.68
CLSTN3-207ENST00000537408 PPP1R11O60927 126 aaPredicted RBP10.81□□□□□ -0.68
CLSTN3-207ENST00000537408 INMTO95050 263 aa10.81□□□□□ -0.68
CLSTN3-207ENST00000537408 APRTP07741 180 aa10.81□□□□□ -0.68
CLSTN3-207ENST00000537408 ICAM2P13598 275 aa10.81□□□□□ -0.68
CLSTN3-207ENST00000537408 INSRRP14616 1297 aa10.81□□□□□ -0.68
CLSTN3-207ENST00000537408 ITGA2P17301 1181 aa10.81□□□□□ -0.68
CLSTN3-207ENST00000537408 HNF4AP41235 474 aa10.81□□□□□ -0.68
CLSTN3-207ENST00000537408 SURF1Q15526 300 aa10.81□□□□□ -0.68
CLSTN3-207ENST00000537408 ARMCX4Q5H9R4 360 aa10.81□□□□□ -0.68
CLSTN3-207ENST00000537408 OTUD3Q5T2D3 398 aaPredicted RBP10.81□□□□□ -0.68
CLSTN3-207ENST00000537408 SCYL2Q6P3W7 929 aa10.81□□□□□ -0.68
CLSTN3-207ENST00000537408 MAMSTRQ6ZN01 415 aa10.81□□□□□ -0.68
CLSTN3-207ENST00000537408 OTOP2Q7RTS6 562 aa10.81□□□□□ -0.68
CLSTN3-207ENST00000537408 OR8H2Q8N162 312 aa10.81□□□□□ -0.68
CLSTN3-207ENST00000537408 TRPV3Q8NET8 790 aa10.81□□□□□ -0.68
CLSTN3-207ENST00000537408 DYNC2LI1Q8TCX1 351 aa10.81□□□□□ -0.68
CLSTN3-207ENST00000537408 MRPL4Q9BYD3 311 aaKnown RBP10.81□□□□□ -0.68
CLSTN3-207ENST00000537408 PDZD7Q9H5P4 517 aa10.81□□□□□ -0.68
CLSTN3-207ENST00000537408 SOX17Q9H6I2 414 aaPredicted RBP10.81□□□□□ -0.68
CLSTN3-207ENST00000537408 SNX15Q9NRS6 342 aa10.81□□□□□ -0.68
CLSTN3-207ENST00000537408 HSPBP1Q9NZL4 362 aa10.81□□□□□ -0.68
CLSTN3-207ENST00000537408 PCDH10Q9P2E7 1040 aa10.81□□□□□ -0.68
CLSTN3-207ENST00000537408 LEUTXA8MZ59 168 aa10.81□□□□□ -0.68
CLSTN3-207ENST00000537408 BTN3A3O00478 584 aa10.81□□□□□ -0.68
CLSTN3-207ENST00000537408 DLGAP1O14490 977 aa10.81□□□□□ -0.68
CLSTN3-207ENST00000537408 OR5F1O95221 314 aa10.81□□□□□ -0.68
CLSTN3-207ENST00000537408 ASS1P00966 412 aaKnown RBP10.81□□□□□ -0.68
CLSTN3-207ENST00000537408 SNRPB2P08579 225 aaKnown RBP10.81□□□□□ -0.68
CLSTN3-207ENST00000537408 THRBP10828 461 aa10.81□□□□□ -0.68
CLSTN3-207ENST00000537408 TRIM23P36406 574 aa10.81□□□□□ -0.68
CLSTN3-207ENST00000537408 ADPRMQ3LIE5 342 aa10.81□□□□□ -0.68
CLSTN3-207ENST00000537408 CATSPEREQ5SY80 951 aa10.81□□□□□ -0.68
CLSTN3-207ENST00000537408 CREB3L2Q70SY1 520 aa10.81□□□□□ -0.68
CLSTN3-207ENST00000537408 C16orf62Q7Z3J2 963 aa10.81□□□□□ -0.68
CLSTN3-207ENST00000537408 SPPL2CQ8IUH8 684 aa10.81□□□□□ -0.68
CLSTN3-207ENST00000537408 LINC00518Q8N0U6 118 aa10.81□□□□□ -0.68
CLSTN3-207ENST00000537408 TAS1R2Q8TE23 839 aa10.81□□□□□ -0.68
CLSTN3-207ENST00000537408 ZNF578Q96N58 590 aaPredicted RBP10.81□□□□□ -0.68
CLSTN3-207ENST00000537408 TLK1Q9UKI8 766 aa10.81□□□□□ -0.68
CLSTN3-207ENST00000537408 TRPV2Q9Y5S1 764 aa10.81□□□□□ -0.68
CLSTN3-207ENST00000537408 PEX16Q9Y5Y5 336 aa10.81□□□□□ -0.68
CLSTN3-207ENST00000537408 NRP1O14786 923 aa10.8□□□□□ -0.68
CLSTN3-207ENST00000537408 EXTL3O43909 919 aa10.8□□□□□ -0.68
CLSTN3-207ENST00000537408 PIGNO95427 931 aa10.8□□□□□ -0.68
CLSTN3-207ENST00000537408 IFNA14P01570 189 aa10.8□□□□□ -0.68
CLSTN3-207ENST00000537408 MMP3P08254 477 aa10.8□□□□□ -0.68
CLSTN3-207ENST00000537408 RFC2P35250 354 aa10.8□□□□□ -0.68
CLSTN3-207ENST00000537408 TMEM198Q66K66 360 aa10.8□□□□□ -0.68
CLSTN3-207ENST00000537408 SLC39A5Q6ZMH5 540 aa10.8□□□□□ -0.68
CLSTN3-207ENST00000537408 METTL3Q86U44 580 aaKnown RBP10.8□□□□□ -0.68
CLSTN3-207ENST00000537408 LRRC71Q8N4P6 559 aa10.8□□□□□ -0.68
CLSTN3-207ENST00000537408 FAM83FQ8NEG4 500 aaPredicted RBP10.8□□□□□ -0.68
CLSTN3-207ENST00000537408 REPS2Q8NFH8 660 aa10.8□□□□□ -0.68
CLSTN3-207ENST00000537408 OR10T2Q8NGX3 314 aa10.8□□□□□ -0.68
CLSTN3-207ENST00000537408 TESCQ96BS2 214 aa10.8□□□□□ -0.68
CLSTN3-207ENST00000537408 TOR3AQ9H497 397 aa10.8□□□□□ -0.68
CLSTN3-207ENST00000537408 CACNA2D2Q9NY47 1150 aa10.8□□□□□ -0.68
CLSTN3-207ENST00000537408 F8W810 466 aa10.8□□□□□ -0.68
CLSTN3-207ENST00000537408 APOC4-APOC2K7ER74 178 aa10.8□□□□□ -0.68
CLSTN3-207ENST00000537408 APOC2P02655 101 aa10.8□□□□□ -0.68
CLSTN3-207ENST00000537408 HMGN1P05114 100 aa10.8□□□□□ -0.68
CLSTN3-207ENST00000537408 JUNP05412 331 aaKnown RBP10.8□□□□□ -0.68
CLSTN3-207ENST00000537408 IL7RP16871 459 aa10.8□□□□□ -0.68
CLSTN3-207ENST00000537408 ITGALP20701 1170 aa10.8□□□□□ -0.68
CLSTN3-207ENST00000537408 ATP6V1B2P21281 511 aa10.8□□□□□ -0.68
CLSTN3-207ENST00000537408 F8A1P23610 371 aa10.8□□□□□ -0.68
CLSTN3-207ENST00000537408 SLC15A1P46059 708 aa10.8□□□□□ -0.68
CLSTN3-207ENST00000537408 EFNA5P52803 228 aa10.8□□□□□ -0.68
CLSTN3-207ENST00000537408 NDST1P52848 882 aa10.8□□□□□ -0.68
CLSTN3-207ENST00000537408 PHC2Q8IXK0 858 aa10.8□□□□□ -0.68
CLSTN3-207ENST00000537408 STON2Q8WXE9 905 aa10.8□□□□□ -0.68
CLSTN3-207ENST00000537408 MCEEQ96PE7 176 aa10.8□□□□□ -0.68
CLSTN3-207ENST00000537408 GAD1Q99259 594 aa10.8□□□□□ -0.68
CLSTN3-207ENST00000537408 RSAD1Q9HA92 442 aa10.8□□□□□ -0.68
CLSTN3-207ENST00000537408 SMYD2Q9NRG4 433 aa10.8□□□□□ -0.68
CLSTN3-207ENST00000537408 GJD2Q9UKL4 321 aa10.8□□□□□ -0.68
CLSTN3-207ENST00000537408 ZNF175Q9Y473 711 aa10.8□□□□□ -0.68
CLSTN3-207ENST00000537408 A0A0G2JMP0 313 aa10.8□□□□□ -0.68
CLSTN3-207ENST00000537408 PRR23AA6NEV1 266 aa10.8□□□□□ -0.68
CLSTN3-207ENST00000537408 E5RI56 91 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms