RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 PHF21AQ96BD5 680 aa3.7□□□□□ -1.82
MCF2-210ENST00000536274 ALKBH8Q96BT7 664 aaKnown RBP3.7□□□□□ -1.82
MCF2-210ENST00000536274 FOPNLQ96NB1 174 aa3.7□□□□□ -1.82
MCF2-210ENST00000536274 FAM129BQ96TA1 746 aa3.7□□□□□ -1.82
MCF2-210ENST00000536274 MXRA8Q9BRK3 442 aa3.7□□□□□ -1.82
MCF2-210ENST00000536274 FEM1AQ9BSK4 669 aa3.7□□□□□ -1.82
MCF2-210ENST00000536274 RIBC2Q9H4K1 309 aa3.7□□□□□ -1.82
MCF2-210ENST00000536274 ELOVL6Q9H5J4 265 aa3.7□□□□□ -1.82
MCF2-210ENST00000536274 SLA2Q9H6Q3 261 aa3.7□□□□□ -1.82
MCF2-210ENST00000536274 CAB39LQ9H9S4 337 aa3.7□□□□□ -1.82
MCF2-210ENST00000536274 RBAKQ9NYW8 714 aaPredicted RBP3.7□□□□□ -1.82
MCF2-210ENST00000536274 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.7□□□□□ -1.82
MCF2-210ENST00000536274 PTBP2Q9UKA9 531 aaKnown RBP3.7□□□□□ -1.82
MCF2-210ENST00000536274 MAFFQ9ULX9 164 aa3.7□□□□□ -1.82
MCF2-210ENST00000536274 CITO14578 2027 aa3.7□□□□□ -1.82
MCF2-210ENST00000536274 A0A0B4J293 547 aa3.7□□□□□ -1.82
MCF2-210ENST00000536274 MAGEB6P1A0A0J9YX57 407 aa3.7□□□□□ -1.82
MCF2-210ENST00000536274 HMX3A6NHT5 357 aa3.7□□□□□ -1.82
MCF2-210ENST00000536274 C16orf96A6NNT2 1141 aa3.7□□□□□ -1.82
MCF2-210ENST00000536274 WDR64B1ANS9 1081 aa3.7□□□□□ -1.82
MCF2-210ENST00000536274 STMND1H3BQB6 276 aa3.7□□□□□ -1.82
MCF2-210ENST00000536274 CXCL11O14625 94 aa3.7□□□□□ -1.82
MCF2-210ENST00000536274 LRIG2O94898 1065 aa3.7□□□□□ -1.82
MCF2-210ENST00000536274 POMCP01189 267 aa3.7□□□□□ -1.82
MCF2-210ENST00000536274 HRGP04196 525 aa3.7□□□□□ -1.82
MCF2-210ENST00000536274 KRT19P08727 400 aa3.7□□□□□ -1.82
MCF2-210ENST00000536274 HOXD4P09016 255 aaPredicted RBP3.7□□□□□ -1.82
MCF2-210ENST00000536274 ADORA3P0DMS8 318 aa3.7□□□□□ -1.82
MCF2-210ENST00000536274 RALBP11234 206 aa3.7□□□□□ -1.82
MCF2-210ENST00000536274 GZMAP12544 262 aa3.7□□□□□ -1.82
MCF2-210ENST00000536274 CYP11B1P15538 503 aa3.7□□□□□ -1.82
MCF2-210ENST00000536274 TNNI3P19429 210 aa3.7□□□□□ -1.82
MCF2-210ENST00000536274 TGM4P49221 684 aa3.7□□□□□ -1.82
MCF2-210ENST00000536274 GDI2P50395 445 aaKnown RBP3.7□□□□□ -1.82
MCF2-210ENST00000536274 ETV1P50549 477 aa3.7□□□□□ -1.82
MCF2-210ENST00000536274 SOX10P56693 466 aa3.7□□□□□ -1.82
MCF2-210ENST00000536274 POU5F1BQ06416 359 aa3.7□□□□□ -1.82
MCF2-210ENST00000536274 CDC20Q12834 499 aa3.7□□□□□ -1.82
MCF2-210ENST00000536274 NFIAQ12857 509 aa3.7□□□□□ -1.82
MCF2-210ENST00000536274 SP140Q13342 867 aa3.7□□□□□ -1.82
MCF2-210ENST00000536274 SWI5Q1ZZU3 235 aa3.7□□□□□ -1.82
MCF2-210ENST00000536274 SPATS1Q496A3 300 aa3.7□□□□□ -1.82
MCF2-210ENST00000536274 CCDC14Q49A88 953 aa3.7□□□□□ -1.82
MCF2-210ENST00000536274 GRTP1Q5TC63 336 aa3.7□□□□□ -1.82
MCF2-210ENST00000536274 BSPRYQ5W0U4 402 aa3.7□□□□□ -1.82
MCF2-210ENST00000536274 DCAF15Q66K64 600 aa3.7□□□□□ -1.82
MCF2-210ENST00000536274 C17orf107Q6ZR85 190 aa3.7□□□□□ -1.82
MCF2-210ENST00000536274 SYDE1Q6ZW31 735 aaPredicted RBP3.7□□□□□ -1.82
MCF2-210ENST00000536274 TAS1R3Q7RTX0 852 aa3.7□□□□□ -1.82
MCF2-210ENST00000536274 JAZF1Q86VZ6 243 aa3.7□□□□□ -1.82
MCF2-210ENST00000536274 MICU2Q8IYU8 434 aa3.7□□□□□ -1.82
MCF2-210ENST00000536274 CHCHD4Q8N4Q1 142 aa3.7□□□□□ -1.82
MCF2-210ENST00000536274 YIPF7Q8N8F6 280 aa3.7□□□□□ -1.82
MCF2-210ENST00000536274 TDRD5Q8NAT2 981 aaKnown RBP3.7□□□□□ -1.82
MCF2-210ENST00000536274 MCUQ8NE86 351 aa3.7□□□□□ -1.82
MCF2-210ENST00000536274 ST13P5Q8NFI4 369 aaPredicted RBP3.7□□□□□ -1.82
MCF2-210ENST00000536274 OR6C4Q8NGE1 309 aa3.7□□□□□ -1.82
MCF2-210ENST00000536274 OR13J1Q8NGT2 312 aa3.7□□□□□ -1.82
MCF2-210ENST00000536274 ACTL9Q8TC94 416 aa3.7□□□□□ -1.82
MCF2-210ENST00000536274 SYTL5Q8TDW5 730 aaPredicted RBP3.7□□□□□ -1.82
MCF2-210ENST00000536274 ZFPM2Q8WW38 1151 aa3.7□□□□□ -1.82
MCF2-210ENST00000536274 ST8SIA4Q92187 359 aa3.7□□□□□ -1.82
MCF2-210ENST00000536274 NKD2Q969F2 451 aaPredicted RBP3.7□□□□□ -1.82
MCF2-210ENST00000536274 HDAC10Q969S8 669 aa3.7□□□□□ -1.82
MCF2-210ENST00000536274 PYCR2Q96C36 320 aa3.7□□□□□ -1.82
MCF2-210ENST00000536274 INTS12Q96CB8 462 aaKnown RBP3.7□□□□□ -1.82
MCF2-210ENST00000536274 RNF31Q96EP0 1072 aa3.7□□□□□ -1.82
MCF2-210ENST00000536274 KCNS3Q9BQ31 491 aa3.7□□□□□ -1.82
MCF2-210ENST00000536274 SLIRPQ9GZT3 109 aaKnown RBP3.7□□□□□ -1.82
MCF2-210ENST00000536274 LIN7BQ9HAP6 207 aa3.7□□□□□ -1.82
MCF2-210ENST00000536274 SMURF2Q9HAU4 748 aa3.7□□□□□ -1.82
MCF2-210ENST00000536274 CYP3A43Q9HB55 503 aa3.7□□□□□ -1.82
MCF2-210ENST00000536274 IARS2Q9NSE4 1012 aaKnown RBP3.7□□□□□ -1.82
MCF2-210ENST00000536274 COPG2Q9UBF2 871 aa3.7□□□□□ -1.82
MCF2-210ENST00000536274 OPTCQ9UBM4 332 aa3.7□□□□□ -1.82
MCF2-210ENST00000536274 GIMAP2Q9UG22 337 aa3.7□□□□□ -1.82
MCF2-210ENST00000536274 PFDN2Q9UHV9 154 aa3.7□□□□□ -1.82
MCF2-210ENST00000536274 VPS28Q9UK41 221 aa3.7□□□□□ -1.82
MCF2-210ENST00000536274 NUP50Q9UKX7 468 aa3.7□□□□□ -1.82
MCF2-210ENST00000536274 COPS3Q9UNS2 423 aa3.7□□□□□ -1.82
MCF2-210ENST00000536274 KLHL20Q9Y2M5 609 aa3.7□□□□□ -1.82
MCF2-210ENST00000536274 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.7□□□□□ -1.82
MCF2-210ENST00000536274 WBP11Q9Y2W2 641 aaKnown RBP3.7□□□□□ -1.82
MCF2-210ENST00000536274 TRAV19A0A0A6YYK7 116 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 ATP6AP2A0A1C7CYW4 349 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 MEIOCA2RUB1 952 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 FAM25EA8MYX2 175 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 TRIM38O00635 465 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 CALUO43852 315 aaPredicted RBP3.69□□□□□ -1.82
MCF2-210ENST00000536274 SSX5O60225 188 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 KPNA6O60684 536 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 ATP6AP2O75787 350 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 DDAH1O94760 285 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 FADS2O95864 444 aaKnown RBP3.69□□□□□ -1.82
MCF2-210ENST00000536274 C1QAP02745 245 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 C2P06681 752 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 IL7P13232 177 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 PRKACGP22612 351 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 ACAT1P24752 427 aaKnown RBP3.69□□□□□ -1.82
MCF2-210ENST00000536274 FMO3P31513 532 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms