RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 UTP11Q9Y3A2 253 aaKnown RBP11.94□□□□□ -0.5
CHD4-203ENST00000535717 PCYT1BQ9Y5K3 369 aaPredicted RBP11.94□□□□□ -0.5
CHD4-203ENST00000535717 SLC30A1Q9Y6M5 507 aa11.94□□□□□ -0.5
CHD4-203ENST00000535717 TRBV5-4A0A0C4DH59 114 aa11.93□□□□□ -0.5
CHD4-203ENST00000535717 MAGEB16A2A368 324 aa11.93□□□□□ -0.5
CHD4-203ENST00000535717 SLC30A4O14863 429 aa11.93□□□□□ -0.5
CHD4-203ENST00000535717 TM4SF5O14894 197 aa11.93□□□□□ -0.5
CHD4-203ENST00000535717 AQP9O43315 295 aa11.93□□□□□ -0.5
CHD4-203ENST00000535717 VEGFDO43915 354 aa11.93□□□□□ -0.5
CHD4-203ENST00000535717 NUAK1O60285 661 aa11.93□□□□□ -0.5
CHD4-203ENST00000535717 DNAJC6O75061 913 aa11.93□□□□□ -0.5
CHD4-203ENST00000535717 BANF1O75531 89 aa11.93□□□□□ -0.5
CHD4-203ENST00000535717 GOT2P00505 430 aaKnown RBP11.93□□□□□ -0.5
CHD4-203ENST00000535717 GIMD1P0DJR0 217 aa11.93□□□□□ -0.5
CHD4-203ENST00000535717 CTSEP14091 401 aa11.93□□□□□ -0.5
CHD4-203ENST00000535717 ZNF8P17098 575 aaPredicted RBP11.93□□□□□ -0.5
CHD4-203ENST00000535717 FOXN2P32314 431 aa11.93□□□□□ -0.5
CHD4-203ENST00000535717 CACNG1Q06432 222 aa11.93□□□□□ -0.5
CHD4-203ENST00000535717 DHX9Q08211 1270 aaKnown RBP11.93□□□□□ -0.5
CHD4-203ENST00000535717 TMEM115Q12893 351 aaPredicted RBP11.93□□□□□ -0.5
CHD4-203ENST00000535717 SUZ12Q15022 739 aaKnown RBP11.93□□□□□ -0.5
CHD4-203ENST00000535717 GPR33Q49SQ1 333 aa11.93□□□□□ -0.5
CHD4-203ENST00000535717 PYCR3Q53H96 274 aa11.93□□□□□ -0.5
CHD4-203ENST00000535717 DNAJC21Q5F1R6 531 aaKnown RBP11.93□□□□□ -0.5
CHD4-203ENST00000535717 ZRANB3Q5FWF4 1079 aa11.93□□□□□ -0.5
CHD4-203ENST00000535717 LDLRAP1Q5SW96 308 aa11.93□□□□□ -0.5
CHD4-203ENST00000535717 PSAPL1Q6NUJ1 521 aa11.93□□□□□ -0.5
CHD4-203ENST00000535717 TAS2R42Q7RTR8 314 aa11.93□□□□□ -0.5
CHD4-203ENST00000535717 PIP4P1Q86T03 277 aa11.93□□□□□ -0.5
CHD4-203ENST00000535717 NXPE1Q8N323 547 aa11.93□□□□□ -0.5
CHD4-203ENST00000535717 BBOF1Q8ND07 529 aa11.93□□□□□ -0.5
CHD4-203ENST00000535717 OR6P1Q8NGX9 317 aa11.93□□□□□ -0.5
CHD4-203ENST00000535717 ULK4Q96C45 1275 aa11.93□□□□□ -0.5
CHD4-203ENST00000535717 CCDC97Q96F63 343 aaPredicted RBP11.93□□□□□ -0.5
CHD4-203ENST00000535717 FCRL3Q96P31 734 aaPredicted RBP11.93□□□□□ -0.5
CHD4-203ENST00000535717 TMEM168Q9H0V1 697 aa11.93□□□□□ -0.5
CHD4-203ENST00000535717 L2HGDHQ9H9P8 463 aa11.93□□□□□ -0.5
CHD4-203ENST00000535717 SPASTQ9UBP0 616 aa11.93□□□□□ -0.5
CHD4-203ENST00000535717 ZNHIT2Q9UHR6 403 aa11.93□□□□□ -0.5
CHD4-203ENST00000535717 CRLS1Q9UJA2 301 aa11.93□□□□□ -0.5
CHD4-203ENST00000535717 CDV3Q9UKY7 258 aaKnown RBP11.93□□□□□ -0.5
CHD4-203ENST00000535717 BTBD3Q9Y2F9 522 aa11.93□□□□□ -0.5
CHD4-203ENST00000535717 PRKAB1Q9Y478 270 aa11.93□□□□□ -0.5
CHD4-203ENST00000535717 MAD1L1Q9Y6D9 718 aa11.93□□□□□ -0.5
CHD4-203ENST00000535717 ARID1BQ8NFD5 2236 aaPredicted RBP11.92□□□□□ -0.5
CHD4-203ENST00000535717 FAM237BA0A1B0GVD1 139 aa11.92□□□□□ -0.5
CHD4-203ENST00000535717 ESYT3A0FGR9 886 aa11.92□□□□□ -0.5
CHD4-203ENST00000535717 BHMG1C9JSJ3 638 aaPredicted RBP11.92□□□□□ -0.5
CHD4-203ENST00000535717 LMO7DNF2Z398 122 aa11.92□□□□□ -0.5
CHD4-203ENST00000535717 NDC80O14777 642 aa11.92□□□□□ -0.5
CHD4-203ENST00000535717 CHUKO15111 745 aa11.92□□□□□ -0.5
CHD4-203ENST00000535717 FFAR2O15552 330 aa11.92□□□□□ -0.5
CHD4-203ENST00000535717 FLRT2O43155 660 aa11.92□□□□□ -0.5
CHD4-203ENST00000535717 SH3BP5O60239 455 aa11.92□□□□□ -0.5
CHD4-203ENST00000535717 CDK14O94921 469 aa11.92□□□□□ -0.5
CHD4-203ENST00000535717 ARNTP27540 789 aa11.92□□□□□ -0.5
CHD4-203ENST00000535717 GRK6P43250 576 aa11.92□□□□□ -0.5
CHD4-203ENST00000535717 DRG2P55039 364 aaKnown RBP11.92□□□□□ -0.5
CHD4-203ENST00000535717 ARL4CP56559 192 aa11.92□□□□□ -0.5
CHD4-203ENST00000535717 PRAMEP78395 509 aa11.92□□□□□ -0.5
CHD4-203ENST00000535717 B4GALNT1Q00973 533 aa11.92□□□□□ -0.5
CHD4-203ENST00000535717 CALCOCO2Q13137 446 aa11.92□□□□□ -0.5
CHD4-203ENST00000535717 ELOCQ15369 112 aa11.92□□□□□ -0.5
CHD4-203ENST00000535717 HIF1AQ16665 826 aa11.92□□□□□ -0.5
CHD4-203ENST00000535717 BBS9Q3SYG4 887 aa11.92□□□□□ -0.5
CHD4-203ENST00000535717 ANKRD20A4Q4UJ75 823 aa11.92□□□□□ -0.5
CHD4-203ENST00000535717 DNTTIP2Q5QJE6 756 aaKnown RBP11.92□□□□□ -0.5
CHD4-203ENST00000535717 AFTPHQ6ULP2 937 aa11.92□□□□□ -0.5
CHD4-203ENST00000535717 TMEM135Q86UB9 458 aa11.92□□□□□ -0.5
CHD4-203ENST00000535717 SERPINA9Q86WD7 417 aa11.92□□□□□ -0.5
CHD4-203ENST00000535717 GALNT13Q8IUC8 556 aa11.92□□□□□ -0.5
CHD4-203ENST00000535717 IGDCC3Q8IVU1 814 aa11.92□□□□□ -0.5
CHD4-203ENST00000535717 NAXDQ8IW45 347 aa11.92□□□□□ -0.5
CHD4-203ENST00000535717 PDIK1LQ8N165 341 aa11.92□□□□□ -0.5
CHD4-203ENST00000535717 FSTL5Q8N475 847 aaPredicted RBP11.92□□□□□ -0.5
CHD4-203ENST00000535717 EID2Q8N6I1 236 aa11.92□□□□□ -0.5
CHD4-203ENST00000535717 PNPLA1Q8N8W4 532 aa11.92□□□□□ -0.5
CHD4-203ENST00000535717 RASGEF1AQ8N9B8 481 aa11.92□□□□□ -0.5
CHD4-203ENST00000535717 LRRN4CLQ8ND94 238 aa11.92□□□□□ -0.5
CHD4-203ENST00000535717 OR4L1Q8NH43 312 aa11.92□□□□□ -0.5
CHD4-203ENST00000535717 CCL4L1Q8NHW4 92 aa11.92□□□□□ -0.5
CHD4-203ENST00000535717 SETD7Q8WTS6 366 aaKnown RBP11.92□□□□□ -0.5
CHD4-203ENST00000535717 SEC14L1Q92503 715 aa11.92□□□□□ -0.5
CHD4-203ENST00000535717 ART4Q93070 314 aa11.92□□□□□ -0.5
CHD4-203ENST00000535717 STAMBPL1Q96FJ0 436 aa11.92□□□□□ -0.5
CHD4-203ENST00000535717 SGSM3Q96HU1 749 aa11.92□□□□□ -0.5
CHD4-203ENST00000535717 CAMK1GQ96NX5 476 aa11.92□□□□□ -0.5
CHD4-203ENST00000535717 OR2M4Q96R27 311 aa11.92□□□□□ -0.5
CHD4-203ENST00000535717 RMI1Q9H9A7 625 aa11.92□□□□□ -0.5
CHD4-203ENST00000535717 TRNAU1APQ9NX07 287 aaKnown RBP11.92□□□□□ -0.5
CHD4-203ENST00000535717 DMGDHQ9UI17 866 aaKnown RBP11.92□□□□□ -0.5
CHD4-203ENST00000535717 PLEKHM1Q9Y4G2 1056 aa11.92□□□□□ -0.5
CHD4-203ENST00000535717 GPSM3Q9Y4H4 160 aa11.92□□□□□ -0.5
CHD4-203ENST00000535717 ST14Q9Y5Y6 855 aa11.92□□□□□ -0.5
CHD4-203ENST00000535717 CSNK1G3Q9Y6M4 447 aa11.92□□□□□ -0.5
CHD4-203ENST00000535717 IGLV3-16A0A075B6K0 115 aa11.91□□□□□ -0.5
CHD4-203ENST00000535717 UQCRHLA0A096LP55 91 aa11.91□□□□□ -0.5
CHD4-203ENST00000535717 ZCWPW2A0A1B0GU75 182 aa11.91□□□□□ -0.5
CHD4-203ENST00000535717 NEMP2A6NFY4 417 aa11.91□□□□□ -0.5
CHD4-203ENST00000535717 GPR89AB7ZAQ6 455 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms