RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 PKP3Q9Y446 797 aa12.23□□□□□ -0.45
SCARB1-204ENST00000535005 IGHV1OR15-9A0A0B4J2B8 117 aa12.22□□□□□ -0.45
SCARB1-204ENST00000535005 EXOC1LA0A1B0GW35 172 aa12.22□□□□□ -0.45
SCARB1-204ENST00000535005 BUD23O43709 281 aaKnown RBP12.22□□□□□ -0.45
SCARB1-204ENST00000535005 MMP20O60882 483 aa12.22□□□□□ -0.45
SCARB1-204ENST00000535005 RPP40O75818 363 aaKnown RBP12.22□□□□□ -0.45
SCARB1-204ENST00000535005 PCDH8O95206 1070 aa12.22□□□□□ -0.45
SCARB1-204ENST00000535005 C6P13671 934 aa12.22□□□□□ -0.45
SCARB1-204ENST00000535005 CD6P30203 668 aa12.22□□□□□ -0.45
SCARB1-204ENST00000535005 GPX6P59796 221 aa12.22□□□□□ -0.45
SCARB1-204ENST00000535005 DCDC1P59894 354 aa12.22□□□□□ -0.45
SCARB1-204ENST00000535005 RPS21P63220 83 aaKnown RBP12.22□□□□□ -0.45
SCARB1-204ENST00000535005 SLC34A1Q06495 639 aa12.22□□□□□ -0.45
SCARB1-204ENST00000535005 PTPRCAPQ14761 206 aa12.22□□□□□ -0.45
SCARB1-204ENST00000535005 TMED2Q15363 201 aa12.22□□□□□ -0.45
SCARB1-204ENST00000535005 ZNF449Q6P9G9 518 aa12.22□□□□□ -0.45
SCARB1-204ENST00000535005 ZNF765Q7L2R6 523 aa12.22□□□□□ -0.45
SCARB1-204ENST00000535005 FAM124AQ86V42 546 aa12.22□□□□□ -0.45
SCARB1-204ENST00000535005 TRIM69Q86WT6 500 aa12.22□□□□□ -0.45
SCARB1-204ENST00000535005 HORMAD1Q86X24 394 aa12.22□□□□□ -0.45
SCARB1-204ENST00000535005 CYP4X1Q8N118 509 aa12.22□□□□□ -0.45
SCARB1-204ENST00000535005 DRAXINQ8NBI3 349 aaPredicted RBP12.22□□□□□ -0.45
SCARB1-204ENST00000535005 OR13C4Q8NGS5 318 aa12.22□□□□□ -0.45
SCARB1-204ENST00000535005 ZNF669Q96BR6 464 aaPredicted RBP12.22□□□□□ -0.45
SCARB1-204ENST00000535005 CDKN2AIPNLQ96HQ2 116 aa12.22□□□□□ -0.45
SCARB1-204ENST00000535005 DNAJC1Q96KC8 554 aaKnown RBP12.22□□□□□ -0.45
SCARB1-204ENST00000535005 TRIM56Q9BRZ2 755 aaKnown RBP12.22□□□□□ -0.45
SCARB1-204ENST00000535005 BTBD10Q9BSF8 475 aa12.22□□□□□ -0.45
SCARB1-204ENST00000535005 WRAP53Q9BUR4 548 aaKnown RBP12.22□□□□□ -0.45
SCARB1-204ENST00000535005 TPSD1Q9BZJ3 242 aa12.22□□□□□ -0.45
SCARB1-204ENST00000535005 PCED1AQ9H1Q7 454 aa12.22□□□□□ -0.45
SCARB1-204ENST00000535005 MOCS1Q9NZB8 636 aa12.22□□□□□ -0.45
SCARB1-204ENST00000535005 STX18Q9P2W9 335 aaKnown RBP12.22□□□□□ -0.45
SCARB1-204ENST00000535005 SLC2A6Q9UGQ3 507 aa12.22□□□□□ -0.45
SCARB1-204ENST00000535005 CYP8B1Q9UNU6 501 aa12.22□□□□□ -0.45
SCARB1-204ENST00000535005 CACNA1IQ9P0X4 2223 aa12.22□□□□□ -0.45
SCARB1-204ENST00000535005 TBC1D3DA0A087WVF3 549 aa12.21□□□□□ -0.45
SCARB1-204ENST00000535005 TBC1D3IA0A087WXS9 549 aa12.21□□□□□ -0.45
SCARB1-204ENST00000535005 TBC1D3EA0A087X179 549 aa12.21□□□□□ -0.45
SCARB1-204ENST00000535005 TBC1D3KA0A087X1G2 549 aa12.21□□□□□ -0.45
SCARB1-204ENST00000535005 TBC1D3FA6NER0 549 aaPredicted RBP12.21□□□□□ -0.45
SCARB1-204ENST00000535005 TBC1D3LB9A6J9 549 aa12.21□□□□□ -0.45
SCARB1-204ENST00000535005 WNT9AO14904 365 aa12.21□□□□□ -0.45
SCARB1-204ENST00000535005 TM9SF1O15321 606 aa12.21□□□□□ -0.45
SCARB1-204ENST00000535005 RNGTTO60942 597 aaKnown RBP12.21□□□□□ -0.45
SCARB1-204ENST00000535005 SEMA4FO95754 770 aa12.21□□□□□ -0.45
SCARB1-204ENST00000535005 TBC1D3HP0C7X1 549 aa12.21□□□□□ -0.45
SCARB1-204ENST00000535005 BPIP17213 487 aa12.21□□□□□ -0.45
SCARB1-204ENST00000535005 PAMP19021 973 aa12.21□□□□□ -0.45
SCARB1-204ENST00000535005 ARCN1P48444 511 aaKnown RBP12.21□□□□□ -0.45
SCARB1-204ENST00000535005 PXNP49023 591 aaPredicted RBP12.21□□□□□ -0.45
SCARB1-204ENST00000535005 USP39Q53GS9 565 aaKnown RBP12.21□□□□□ -0.45
SCARB1-204ENST00000535005 HHATQ5VTY9 493 aa12.21□□□□□ -0.45
SCARB1-204ENST00000535005 TBC1D3GQ6DHY5 549 aa12.21□□□□□ -0.45
SCARB1-204ENST00000535005 TBC1D3CQ6IPX1 549 aa12.21□□□□□ -0.45
SCARB1-204ENST00000535005 CES3Q6UWW8 571 aa12.21□□□□□ -0.45
SCARB1-204ENST00000535005 C3orf62Q6ZUJ4 267 aa12.21□□□□□ -0.45
SCARB1-204ENST00000535005 FAM47EQ6ZV65 393 aa12.21□□□□□ -0.45
SCARB1-204ENST00000535005 Q6ZVL8 140 aa12.21□□□□□ -0.45
SCARB1-204ENST00000535005 WDR5BQ86VZ2 330 aa12.21□□□□□ -0.45
SCARB1-204ENST00000535005 TBC1D3Q8IZP1 549 aaPredicted RBP12.21□□□□□ -0.45
SCARB1-204ENST00000535005 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.21□□□□□ -0.45
SCARB1-204ENST00000535005 GSDMBQ8TAX9 411 aa12.21□□□□□ -0.45
SCARB1-204ENST00000535005 DTD2Q96FN9 168 aa12.21□□□□□ -0.45
SCARB1-204ENST00000535005 CFAP36Q96G28 342 aa12.21□□□□□ -0.45
SCARB1-204ENST00000535005 TOE1Q96GM8 510 aaKnown RBP12.21□□□□□ -0.45
SCARB1-204ENST00000535005 TBATAQ96M53 351 aa12.21□□□□□ -0.45
SCARB1-204ENST00000535005 PLEKHG4BQ96PX9 1271 aa12.21□□□□□ -0.45
SCARB1-204ENST00000535005 MLXIPLQ9NP71 852 aa12.21□□□□□ -0.45
SCARB1-204ENST00000535005 APPL1Q9UKG1 709 aa12.21□□□□□ -0.45
SCARB1-204ENST00000535005 ANGPTL2Q9UKU9 493 aa12.21□□□□□ -0.45
SCARB1-204ENST00000535005 ZFR2Q9UPR6 939 aaKnown RBP12.21□□□□□ -0.45
SCARB1-204ENST00000535005 MYLKQ15746 1914 aa12.21□□□□□ -0.46
SCARB1-204ENST00000535005 A0A1W2PQU0 124 aa12.21□□□□□ -0.46
SCARB1-204ENST00000535005 IGLON5A6NGN9 336 aa12.21□□□□□ -0.46
SCARB1-204ENST00000535005 F8W8V4 182 aa12.21□□□□□ -0.46
SCARB1-204ENST00000535005 MAP3K7O43318 606 aa12.21□□□□□ -0.46
SCARB1-204ENST00000535005 LZTS3O60299 673 aaPredicted RBP12.21□□□□□ -0.46
SCARB1-204ENST00000535005 GPR37L1O60883 481 aa12.21□□□□□ -0.46
SCARB1-204ENST00000535005 TM7SF2O76062 418 aa12.21□□□□□ -0.46
SCARB1-204ENST00000535005 RECQL5O94762 991 aaPredicted RBP12.21□□□□□ -0.46
SCARB1-204ENST00000535005 TGDSO95455 350 aa12.21□□□□□ -0.46
SCARB1-204ENST00000535005 ARNTP27540 789 aa12.21□□□□□ -0.46
SCARB1-204ENST00000535005 SSTR1P30872 391 aa12.21□□□□□ -0.46
SCARB1-204ENST00000535005 SPAM1P38567 509 aa12.21□□□□□ -0.46
SCARB1-204ENST00000535005 CCR5P51681 352 aa12.21□□□□□ -0.46
SCARB1-204ENST00000535005 ARSDP51689 593 aa12.21□□□□□ -0.46
SCARB1-204ENST00000535005 XIAPP98170 497 aa12.21□□□□□ -0.46
SCARB1-204ENST00000535005 DPTQ07507 201 aa12.21□□□□□ -0.46
SCARB1-204ENST00000535005 DNAJC3Q13217 504 aa12.21□□□□□ -0.46
SCARB1-204ENST00000535005 ACOX1Q15067 660 aa12.21□□□□□ -0.46
SCARB1-204ENST00000535005 CLNKQ7Z7G1 428 aa12.21□□□□□ -0.46
SCARB1-204ENST00000535005 GPR26Q8NDV2 337 aa12.21□□□□□ -0.46
SCARB1-204ENST00000535005 NELL1Q92832 810 aa12.21□□□□□ -0.46
SCARB1-204ENST00000535005 STMN2Q93045 179 aa12.21□□□□□ -0.46
SCARB1-204ENST00000535005 HDAC10Q969S8 669 aa12.21□□□□□ -0.46
SCARB1-204ENST00000535005 FAM126AQ9BYI3 521 aaPredicted RBP12.21□□□□□ -0.46
SCARB1-204ENST00000535005 VCX3BQ9H321 246 aa12.21□□□□□ -0.46
SCARB1-204ENST00000535005 FAM83DQ9H4H8 585 aa12.21□□□□□ -0.46
SCARB1-204ENST00000535005 VCX3AQ9NNX9 186 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms