RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 PRICKLE1Q96MT3 831 aaPredicted RBP3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 CTRCQ99895 268 aa3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 BOCQ9BWV1 1114 aa3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 RAB34Q9BZG1 259 aa3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 TM6SF1Q9BZW5 370 aa3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 FOXP1Q9H334 677 aaPredicted RBP3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 LRRN3Q9H3W5 708 aa3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 ST6GALNAC4Q9H4F1 302 aa3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 RDH14Q9HBH5 336 aa3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 USP29Q9HBJ7 922 aa3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 PRDM8Q9NQV8 689 aa3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 OCIAD1Q9NX40 245 aa3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 KCND2Q9NZV8 630 aa3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 NDOR1Q9UHB4 597 aa3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 IPO11Q9UI26 975 aaKnown RBP3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 TLK1Q9UKI8 766 aa3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 PACSIN3Q9UKS6 424 aa3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 DMTF1Q9Y222 760 aa3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 COQ6Q9Y2Z9 468 aa3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 CEP83Q9Y592 693 aa3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 B3GALT1Q9Y5Z6 326 aa3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 OBSL1O75147 1896 aa3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 FBN1P35555 2871 aaKnown RBP3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 RP1P56715 2156 aa3.01□□□□□ -1.93
CHMP4A-208ENST00000534106 ANK1P16157 1881 aa3.01□□□□□ -1.93
CHMP4A-208ENST00000534106 ATP8B3O60423 1300 aa3.01□□□□□ -1.93
CHMP4A-208ENST00000534106 ITIH6Q6UXX5 1313 aa3.01□□□□□ -1.93
CHMP4A-208ENST00000534106 hCG_2014768A0A024R1R8 64 aa3.01□□□□□ -1.93
CHMP4A-208ENST00000534106 IGLON5A6NGN9 336 aa3.01□□□□□ -1.93
CHMP4A-208ENST00000534106 ZAR1LA6NP61 321 aa3.01□□□□□ -1.93
CHMP4A-208ENST00000534106 YJEFN3A6XGL0 299 aa3.01□□□□□ -1.93
CHMP4A-208ENST00000534106 ZNF891A8MT65 544 aaPredicted RBP3.01□□□□□ -1.93
CHMP4A-208ENST00000534106 D6RAR5 112 aa3.01□□□□□ -1.93
CHMP4A-208ENST00000534106 E7ENQ6 273 aa3.01□□□□□ -1.93
CHMP4A-208ENST00000534106 SPTLC2O15270 562 aa3.01□□□□□ -1.93
CHMP4A-208ENST00000534106 SMAD6O43541 496 aaKnown RBP3.01□□□□□ -1.93
CHMP4A-208ENST00000534106 ACSL4O60488 711 aa3.01□□□□□ -1.93
CHMP4A-208ENST00000534106 RAD1O60671 282 aa3.01□□□□□ -1.93
CHMP4A-208ENST00000534106 CNTN5O94779 1100 aa3.01□□□□□ -1.93
CHMP4A-208ENST00000534106 LDHAP00338 332 aaKnown RBP3.01□□□□□ -1.93
CHMP4A-208ENST00000534106 ANXA6P08133 673 aa3.01□□□□□ -1.93
CHMP4A-208ENST00000534106 IDEP14735 1019 aa3.01□□□□□ -1.93
CHMP4A-208ENST00000534106 PDGFRAP16234 1089 aa3.01□□□□□ -1.93
CHMP4A-208ENST00000534106 ZNF18P17022 549 aa3.01□□□□□ -1.93
CHMP4A-208ENST00000534106 CD58P19256 250 aa3.01□□□□□ -1.93
CHMP4A-208ENST00000534106 SDHAP31040 664 aa3.01□□□□□ -1.93
CHMP4A-208ENST00000534106 AKT2P31751 481 aa3.01□□□□□ -1.93
CHMP4A-208ENST00000534106 ADRA1BP35368 520 aa3.01□□□□□ -1.93
CHMP4A-208ENST00000534106 PRPHP41219 470 aa3.01□□□□□ -1.93
CHMP4A-208ENST00000534106 UBA7P41226 1012 aa3.01□□□□□ -1.93
CHMP4A-208ENST00000534106 CYP2J2P51589 502 aa3.01□□□□□ -1.93
CHMP4A-208ENST00000534106 TKTL1P51854 596 aa3.01□□□□□ -1.93
CHMP4A-208ENST00000534106 OR1D5P58170 312 aa3.01□□□□□ -1.93
CHMP4A-208ENST00000534106 B4GALNT1Q00973 533 aa3.01□□□□□ -1.93
CHMP4A-208ENST00000534106 ALDH6A1Q02252 535 aaKnown RBP3.01□□□□□ -1.93
CHMP4A-208ENST00000534106 COL10A1Q03692 680 aa3.01□□□□□ -1.93
CHMP4A-208ENST00000534106 CYP24A1Q07973 514 aa3.01□□□□□ -1.93
CHMP4A-208ENST00000534106 HNRNPA0Q13151 305 aaKnown RBP3.01□□□□□ -1.93
CHMP4A-208ENST00000534106 ORC2Q13416 577 aaPredicted RBP3.01□□□□□ -1.93
CHMP4A-208ENST00000534106 BIRC3Q13489 604 aa3.01□□□□□ -1.93
CHMP4A-208ENST00000534106 ERV3-1Q14264 604 aa3.01□□□□□ -1.93
CHMP4A-208ENST00000534106 PTK2BQ14289 1009 aa3.01□□□□□ -1.93
CHMP4A-208ENST00000534106 DLG2Q15700 870 aa3.01□□□□□ -1.93
CHMP4A-208ENST00000534106 BMT2Q1RMZ1 405 aa3.01□□□□□ -1.93
CHMP4A-208ENST00000534106 TIGD2Q4W5G0 525 aa3.01□□□□□ -1.93
CHMP4A-208ENST00000534106 DCAF6Q58WW2 860 aa3.01□□□□□ -1.93
CHMP4A-208ENST00000534106 FAXCQ5TGI0 409 aa3.01□□□□□ -1.93
CHMP4A-208ENST00000534106 BSPRYQ5W0U4 402 aa3.01□□□□□ -1.93
CHMP4A-208ENST00000534106 LINGO4Q6UY18 593 aa3.01□□□□□ -1.93
CHMP4A-208ENST00000534106 CCDC186Q7Z3E2 898 aa3.01□□□□□ -1.93
CHMP4A-208ENST00000534106 PIGZQ86VD9 579 aa3.01□□□□□ -1.93
CHMP4A-208ENST00000534106 WDR49Q8IV35 697 aa3.01□□□□□ -1.93
CHMP4A-208ENST00000534106 PLA2G15Q8NCC3 412 aa3.01□□□□□ -1.93
CHMP4A-208ENST00000534106 OR52K2Q8NGK3 314 aa3.01□□□□□ -1.93
CHMP4A-208ENST00000534106 APOBEC4Q8WW27 367 aaKnown RBP3.01□□□□□ -1.93
CHMP4A-208ENST00000534106 NINJ1Q92982 152 aa3.01□□□□□ -1.93
CHMP4A-208ENST00000534106 TSACCQ96A04 125 aaPredicted RBP3.01□□□□□ -1.93
CHMP4A-208ENST00000534106 TNIP3Q96KP6 325 aa3.01□□□□□ -1.93
CHMP4A-208ENST00000534106 RANBP9Q96S59 729 aa3.01□□□□□ -1.93
CHMP4A-208ENST00000534106 GPHA2Q96T91 129 aa3.01□□□□□ -1.93
CHMP4A-208ENST00000534106 KLF6Q99612 283 aaPredicted RBP3.01□□□□□ -1.93
CHMP4A-208ENST00000534106 NUDT22Q9BRQ3 303 aa3.01□□□□□ -1.93
CHMP4A-208ENST00000534106 LRRC61Q9BV99 259 aa3.01□□□□□ -1.93
CHMP4A-208ENST00000534106 DUSP16Q9BY84 665 aa3.01□□□□□ -1.93
CHMP4A-208ENST00000534106 SLC17A9Q9BYT1 436 aa3.01□□□□□ -1.93
CHMP4A-208ENST00000534106 ULBP1Q9BZM6 244 aa3.01□□□□□ -1.93
CHMP4A-208ENST00000534106 STRADBQ9C0K7 418 aa3.01□□□□□ -1.93
CHMP4A-208ENST00000534106 MBNL1Q9NR56 388 aaKnown RBP3.01□□□□□ -1.93
CHMP4A-208ENST00000534106 RRN3Q9NYV6 651 aa3.01□□□□□ -1.93
CHMP4A-208ENST00000534106 CLIC5Q9NZA1 410 aa3.01□□□□□ -1.93
CHMP4A-208ENST00000534106 TMEM9Q9P0T7 183 aa3.01□□□□□ -1.93
CHMP4A-208ENST00000534106 DKK3Q9UBP4 350 aa3.01□□□□□ -1.93
CHMP4A-208ENST00000534106 TUBD1Q9UJT1 453 aa3.01□□□□□ -1.93
CHMP4A-208ENST00000534106 STOML2Q9UJZ1 356 aa3.01□□□□□ -1.93
CHMP4A-208ENST00000534106 NOL7Q9UMY1 257 aaKnown RBP3.01□□□□□ -1.93
CHMP4A-208ENST00000534106 GPR34Q9UPC5 381 aa3.01□□□□□ -1.93
CHMP4A-208ENST00000534106 EXOC7Q9UPT5 735 aa3.01□□□□□ -1.93
CHMP4A-208ENST00000534106 CSNK1G3Q9Y6M4 447 aa3.01□□□□□ -1.93
CHMP4A-208ENST00000534106 CITO14578 2027 aa3.01□□□□□ -1.93
CHMP4A-208ENST00000534106 JMJD1CQ15652 2540 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms