RNA–Protein interactions for RNA: ENST00000533562.1

CAPRIN1-213, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-213ENST00000533562 ZNF711Q9Y462 761 aa12.27□□□□□ -0.45
CAPRIN1-213ENST00000533562 HYOU1Q9Y4L1 999 aa12.27□□□□□ -0.45
CAPRIN1-213ENST00000533562 PCYT1BQ9Y5K3 369 aaPredicted RBP12.27□□□□□ -0.45
CAPRIN1-213ENST00000533562 ALG6Q9Y672 507 aa12.27□□□□□ -0.45
CAPRIN1-213ENST00000533562 SETXQ7Z333 2677 aaKnown RBP12.27□□□□□ -0.45
CAPRIN1-213ENST00000533562 B4E171 279 aa12.26□□□□□ -0.45
CAPRIN1-213ENST00000533562 KMOO15229 486 aa12.26□□□□□ -0.45
CAPRIN1-213ENST00000533562 VEGFDO43915 354 aa12.26□□□□□ -0.45
CAPRIN1-213ENST00000533562 PMPCBO75439 489 aa12.26□□□□□ -0.45
CAPRIN1-213ENST00000533562 ZRANB2O95218 330 aaKnown RBP eCLIP12.26□□□□□ -0.45
CAPRIN1-213ENST00000533562 EPOP01588 193 aa12.26□□□□□ -0.45
CAPRIN1-213ENST00000533562 SLC4A1P02730 911 aa12.26□□□□□ -0.45
CAPRIN1-213ENST00000533562 PTPN3P26045 913 aa12.26□□□□□ -0.45
CAPRIN1-213ENST00000533562 CSF2RBP32927 897 aa12.26□□□□□ -0.45
CAPRIN1-213ENST00000533562 TSPAN7P41732 249 aa12.26□□□□□ -0.45
CAPRIN1-213ENST00000533562 ATP1A2P50993 1020 aa12.26□□□□□ -0.45
CAPRIN1-213ENST00000533562 EPHA4P54764 986 aa12.26□□□□□ -0.45
CAPRIN1-213ENST00000533562 HADHBP55084 474 aaKnown RBP12.26□□□□□ -0.45
CAPRIN1-213ENST00000533562 RAB15P59190 212 aa12.26□□□□□ -0.45
CAPRIN1-213ENST00000533562 TBX2Q13207 712 aaPredicted RBP12.26□□□□□ -0.45
CAPRIN1-213ENST00000533562 PRKD1Q15139 912 aaPredicted RBP12.26□□□□□ -0.45
CAPRIN1-213ENST00000533562 TAZQ16635 292 aa12.26□□□□□ -0.45
CAPRIN1-213ENST00000533562 TFDP3Q5H9I0 405 aa12.26□□□□□ -0.45
CAPRIN1-213ENST00000533562 SNAP47Q5SQN1 464 aa12.26□□□□□ -0.45
CAPRIN1-213ENST00000533562 B4GALNT4Q76KP1 1039 aa12.26□□□□□ -0.45
CAPRIN1-213ENST00000533562 ADGRG6Q86SQ4 1221 aa12.26□□□□□ -0.45
CAPRIN1-213ENST00000533562 ZNF761Q86XN6 746 aaPredicted RBP12.26□□□□□ -0.45
CAPRIN1-213ENST00000533562 FAM129CQ86XR2 697 aa12.26□□□□□ -0.45
CAPRIN1-213ENST00000533562 RCOR2Q8IZ40 523 aa12.26□□□□□ -0.45
CAPRIN1-213ENST00000533562 ART4Q93070 314 aa12.26□□□□□ -0.45
CAPRIN1-213ENST00000533562 PLEKHG4BQ96PX9 1271 aa12.26□□□□□ -0.45
CAPRIN1-213ENST00000533562 TEFMQ96QE5 360 aaKnown RBP12.26□□□□□ -0.45
CAPRIN1-213ENST00000533562 VAT1Q99536 393 aa12.26□□□□□ -0.45
CAPRIN1-213ENST00000533562 TRABDQ9H4I3 376 aa12.26□□□□□ -0.45
CAPRIN1-213ENST00000533562 ARFGAP3Q9NP61 516 aa12.26□□□□□ -0.45
CAPRIN1-213ENST00000533562 LUC7LQ9NQ29 371 aaKnown RBP12.26□□□□□ -0.45
CAPRIN1-213ENST00000533562 PRDM8Q9NQV8 689 aa12.26□□□□□ -0.45
CAPRIN1-213ENST00000533562 KLC4Q9NSK0 619 aa12.26□□□□□ -0.45
CAPRIN1-213ENST00000533562 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.26□□□□□ -0.451e-10■■■■■ 32.8
CAPRIN1-213ENST00000533562 TMEM9Q9P0T7 183 aa12.26□□□□□ -0.45
CAPRIN1-213ENST00000533562 SAE1Q9UBE0 346 aaPredicted RBP12.26□□□□□ -0.45
CAPRIN1-213ENST00000533562 CPNE7Q9UBL6 633 aa12.26□□□□□ -0.45
CAPRIN1-213ENST00000533562 FAM153AQ9UHL3 310 aa12.26□□□□□ -0.45
CAPRIN1-213ENST00000533562 A6NCN8 305 aa12.25□□□□□ -0.45
CAPRIN1-213ENST00000533562 EFCAB7A8K855 629 aa12.25□□□□□ -0.45
CAPRIN1-213ENST00000533562 B8ZZF3 427 aa12.25□□□□□ -0.45
CAPRIN1-213ENST00000533562 CHUKO15111 745 aa12.25□□□□□ -0.45
CAPRIN1-213ENST00000533562 CDK14O94921 469 aa12.25□□□□□ -0.45
CAPRIN1-213ENST00000533562 SFTPCP11686 197 aa12.25□□□□□ -0.45
CAPRIN1-213ENST00000533562 PLA2G2AP14555 144 aa12.25□□□□□ -0.45
CAPRIN1-213ENST00000533562 BPIP17213 487 aa12.25□□□□□ -0.45
CAPRIN1-213ENST00000533562 HMGCLP35914 325 aa12.25□□□□□ -0.45
CAPRIN1-213ENST00000533562 SPA17Q15506 151 aa12.25□□□□□ -0.45
CAPRIN1-213ENST00000533562 INSCQ1MX18 579 aa12.25□□□□□ -0.45
CAPRIN1-213ENST00000533562 FAM182AQ5T1J6 154 aa12.25□□□□□ -0.45
CAPRIN1-213ENST00000533562 ZDHHC20Q5W0Z9 365 aa12.25□□□□□ -0.45
CAPRIN1-213ENST00000533562 SPOCD1Q6ZMY3 1216 aa12.25□□□□□ -0.45
CAPRIN1-213ENST00000533562 PID1Q7Z2X4 250 aa12.25□□□□□ -0.45
CAPRIN1-213ENST00000533562 ARHGAP22Q7Z5H3 698 aa12.25□□□□□ -0.45
CAPRIN1-213ENST00000533562 VASH2Q86V25 355 aa12.25□□□□□ -0.45
CAPRIN1-213ENST00000533562 LRRTM4Q86VH4 590 aa12.25□□□□□ -0.45
CAPRIN1-213ENST00000533562 PLXDC1Q8IUK5 500 aa12.25□□□□□ -0.45
CAPRIN1-213ENST00000533562 CCDC170Q8IYT3 715 aa12.25□□□□□ -0.45
CAPRIN1-213ENST00000533562 IL22RA1Q8N6P7 574 aa12.25□□□□□ -0.45
CAPRIN1-213ENST00000533562 TTC25Q96NG3 672 aa12.25□□□□□ -0.45
CAPRIN1-213ENST00000533562 ZPBPQ9BS86 351 aa12.25□□□□□ -0.45
CAPRIN1-213ENST00000533562 TRIM5Q9C035 493 aa12.25□□□□□ -0.45
CAPRIN1-213ENST00000533562 SEMA4CQ9C0C4 833 aa12.25□□□□□ -0.45
CAPRIN1-213ENST00000533562 OSGEPL1Q9H4B0 414 aa12.25□□□□□ -0.45
CAPRIN1-213ENST00000533562 OCIAD1Q9NX40 245 aa12.25□□□□□ -0.45
CAPRIN1-213ENST00000533562 UBP1Q9NZI7 540 aa12.25□□□□□ -0.45
CAPRIN1-213ENST00000533562 PCDHGA4Q9Y5G9 962 aa12.25□□□□□ -0.45
CAPRIN1-213ENST00000533562 B3GALT1Q9Y5Z6 326 aa12.25□□□□□ -0.45
CAPRIN1-213ENST00000533562 ADGRG1Q9Y653 693 aa12.25□□□□□ -0.45
CAPRIN1-213ENST00000533562 TENM4Q6N022 2769 aa12.25□□□□□ -0.45
CAPRIN1-213ENST00000533562 LOC285095A0A1B0GVY8 99 aa12.24□□□□□ -0.45
CAPRIN1-213ENST00000533562 A8MU76 341 aa12.24□□□□□ -0.45
CAPRIN1-213ENST00000533562 HACD1B0YJ81 288 aa12.24□□□□□ -0.45
CAPRIN1-213ENST00000533562 VIPP01282 170 aa12.24□□□□□ -0.45
CAPRIN1-213ENST00000533562 ZNF7P17097 686 aaPredicted RBP12.24□□□□□ -0.45
CAPRIN1-213ENST00000533562 VCLP18206 1134 aa12.24□□□□□ -0.45
CAPRIN1-213ENST00000533562 XRCC1P18887 633 aaPredicted RBP12.24□□□□□ -0.45
CAPRIN1-213ENST00000533562 UGT1A3P35503 534 aa12.24□□□□□ -0.45
CAPRIN1-213ENST00000533562 MAPK9P45984 424 aa12.24□□□□□ -0.45
CAPRIN1-213ENST00000533562 WNT3AP56704 352 aa12.24□□□□□ -0.45
CAPRIN1-213ENST00000533562 MC2RQ01718 297 aa12.24□□□□□ -0.45
CAPRIN1-213ENST00000533562 WASHC5Q12768 1159 aa12.24□□□□□ -0.45
CAPRIN1-213ENST00000533562 SRSF6Q13247 344 aaKnown RBP12.24□□□□□ -0.45
CAPRIN1-213ENST00000533562 LLGL1Q15334 1064 aa12.24□□□□□ -0.45
CAPRIN1-213ENST00000533562 ZNF648Q5T619 568 aaPredicted RBP12.24□□□□□ -0.45
CAPRIN1-213ENST00000533562 SARM1Q6SZW1 724 aa12.24□□□□□ -0.45
CAPRIN1-213ENST00000533562 CRTC3Q6UUV7 619 aa12.24□□□□□ -0.45
CAPRIN1-213ENST00000533562 ZC3H18Q86VM9 953 aaKnown RBP12.24□□□□□ -0.45
CAPRIN1-213ENST00000533562 CCDC50Q8IVM0 306 aa12.24□□□□□ -0.45
CAPRIN1-213ENST00000533562 TRIM48Q8IWZ4 208 aa12.24□□□□□ -0.45
CAPRIN1-213ENST00000533562 KATNAL2Q8IYT4 538 aa12.24□□□□□ -0.45
CAPRIN1-213ENST00000533562 GDAP1Q8TB36 358 aa12.24□□□□□ -0.45
CAPRIN1-213ENST00000533562 DTX3LQ8TDB6 740 aa12.24□□□□□ -0.45
CAPRIN1-213ENST00000533562 BRSK1Q8TDC3 778 aa12.24□□□□□ -0.45
CAPRIN1-213ENST00000533562 JPH3Q8WXH2 748 aaPredicted RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms