RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 PPP1R8Q12972 351 aaKnown RBP12.16□□□□□ -0.46
BDNF-218ENST00000533246 TERB1Q8NA31 727 aa12.16□□□□□ -0.46
BDNF-218ENST00000533246 SPERTQ8NA61 448 aa12.16□□□□□ -0.46
BDNF-218ENST00000533246 AUTS2Q8WXX7 1259 aa12.16□□□□□ -0.46
BDNF-218ENST00000533246 DLG3Q92796 817 aa12.16□□□□□ -0.46
BDNF-218ENST00000533246 UPF1Q92900 1129 aaKnown RBP eCLIP12.16□□□□□ -0.46
BDNF-218ENST00000533246 NACC2Q96BF6 587 aa12.16□□□□□ -0.46
BDNF-218ENST00000533246 C8orf48Q96LL4 319 aa12.16□□□□□ -0.46
BDNF-218ENST00000533246 ASB2Q96Q27 587 aa12.16□□□□□ -0.46
BDNF-218ENST00000533246 H2AFY2Q9P0M6 372 aaPredicted RBP12.16□□□□□ -0.46
BDNF-218ENST00000533246 CFAP97Q9P2B7 532 aa12.16□□□□□ -0.46
BDNF-218ENST00000533246 PSMD13Q9UNM6 376 aa12.16□□□□□ -0.46
BDNF-218ENST00000533246 H3BN98 237 aa12.16□□□□□ -0.46
BDNF-218ENST00000533246 NBNO60934 754 aa12.16□□□□□ -0.46
BDNF-218ENST00000533246 MLYCDO95822 493 aa12.16□□□□□ -0.46
BDNF-218ENST00000533246 BCL10O95999 233 aa12.16□□□□□ -0.46
BDNF-218ENST00000533246 CATP04040 527 aaKnown RBP12.16□□□□□ -0.46
BDNF-218ENST00000533246 CYP4B1P13584 511 aa12.16□□□□□ -0.46
BDNF-218ENST00000533246 NCK1P16333 377 aa12.16□□□□□ -0.46
BDNF-218ENST00000533246 GJA1P17302 382 aa12.16□□□□□ -0.46
BDNF-218ENST00000533246 ACVRL1P37023 503 aa12.16□□□□□ -0.46
BDNF-218ENST00000533246 CRATP43155 626 aa12.16□□□□□ -0.46
BDNF-218ENST00000533246 ENTPD1P49961 510 aa12.16□□□□□ -0.46
BDNF-218ENST00000533246 SNRPD1P62314 119 aaKnown RBP12.16□□□□□ -0.46
BDNF-218ENST00000533246 RBM20Q5T481 1227 aaKnown RBP12.16□□□□□ -0.46
BDNF-218ENST00000533246 ZCCHC8Q6NZY4 707 aaKnown RBP12.16□□□□□ -0.46
BDNF-218ENST00000533246 PIM3Q86V86 326 aa12.16□□□□□ -0.46
BDNF-218ENST00000533246 ANKRD46Q86W74 232 aa12.16□□□□□ -0.46
BDNF-218ENST00000533246 TWIST2Q8WVJ9 160 aa12.16□□□□□ -0.46
BDNF-218ENST00000533246 APOLD1Q96LR9 279 aa12.16□□□□□ -0.46
BDNF-218ENST00000533246 OR52E6Q96RD3 313 aa12.16□□□□□ -0.46
BDNF-218ENST00000533246 SLC9A7Q96T83 725 aa12.16□□□□□ -0.46
BDNF-218ENST00000533246 RTKNQ9BST9 563 aa12.16□□□□□ -0.46
BDNF-218ENST00000533246 C16orf70Q9BSU1 422 aa12.16□□□□□ -0.46
BDNF-218ENST00000533246 ALG2Q9H553 416 aa12.16□□□□□ -0.46
BDNF-218ENST00000533246 CRTAC1Q9NQ79 661 aa12.16□□□□□ -0.46
BDNF-218ENST00000533246 IGSF9Q9P2J2 1179 aa12.16□□□□□ -0.46
BDNF-218ENST00000533246 CD84Q9UIB8 345 aa12.16□□□□□ -0.46
BDNF-218ENST00000533246 C15orf38-AP3S2A0A0A6YYH1 394 aa12.16□□□□□ -0.46
BDNF-218ENST00000533246 TRAFD1O14545 582 aaPredicted RBP12.16□□□□□ -0.46
BDNF-218ENST00000533246 SLC22A3O75751 556 aa12.16□□□□□ -0.46
BDNF-218ENST00000533246 OR4F21O95013 312 aa12.16□□□□□ -0.46
BDNF-218ENST00000533246 CKMT2P17540 419 aa12.16□□□□□ -0.46
BDNF-218ENST00000533246 POLD2P49005 469 aa12.16□□□□□ -0.46
BDNF-218ENST00000533246 AIF1P55008 147 aa12.16□□□□□ -0.46
BDNF-218ENST00000533246 ARPINQ7Z6K5 226 aa12.16□□□□□ -0.46
BDNF-218ENST00000533246 TRIM48Q8IWZ4 208 aa12.16□□□□□ -0.46
BDNF-218ENST00000533246 OR9I1Q8NGQ6 314 aa12.16□□□□□ -0.46
BDNF-218ENST00000533246 PTCD3Q96EY7 689 aaKnown RBP12.16□□□□□ -0.46
BDNF-218ENST00000533246 TMEM209Q96SK2 561 aa12.16□□□□□ -0.46
BDNF-218ENST00000533246 STRA6Q9BX79 667 aa12.16□□□□□ -0.46
BDNF-218ENST00000533246 RSPH9Q9H1X1 276 aaPredicted RBP12.16□□□□□ -0.46
BDNF-218ENST00000533246 ZFYVE1Q9HBF4 777 aa12.16□□□□□ -0.46
BDNF-218ENST00000533246 USP29Q9HBJ7 922 aa12.16□□□□□ -0.46
BDNF-218ENST00000533246 RPRD1BQ9NQG5 326 aaKnown RBP12.16□□□□□ -0.46
BDNF-218ENST00000533246 GIMAP2Q9UG22 337 aa12.16□□□□□ -0.46
BDNF-218ENST00000533246 PRKAG3Q9UGI9 489 aa12.16□□□□□ -0.46
BDNF-218ENST00000533246 GTF2IRD1Q9UHL9 959 aa12.16□□□□□ -0.46
BDNF-218ENST00000533246 COL14A1Q05707 1796 aaKnown RBP12.16□□□□□ -0.46
BDNF-218ENST00000533246 CCDC162PA2VCL2 907 aa12.15□□□□□ -0.46
BDNF-218ENST00000533246 OR6C75A6NL08 312 aa12.15□□□□□ -0.46
BDNF-218ENST00000533246 SEPT4O43236 478 aa12.15□□□□□ -0.46
BDNF-218ENST00000533246 RPP40O75818 363 aaKnown RBP12.15□□□□□ -0.46
BDNF-218ENST00000533246 UGT1A6P19224 532 aa12.15□□□□□ -0.46
BDNF-218ENST00000533246 UGT1A1P22309 533 aa12.15□□□□□ -0.46
BDNF-218ENST00000533246 UGT1A4P22310 534 aa12.15□□□□□ -0.46
BDNF-218ENST00000533246 UGT1A3P35503 534 aa12.15□□□□□ -0.46
BDNF-218ENST00000533246 UGT1A5P35504 534 aa12.15□□□□□ -0.46
BDNF-218ENST00000533246 NR1H2P55055 460 aa12.15□□□□□ -0.46
BDNF-218ENST00000533246 PHC1P78364 1004 aa12.15□□□□□ -0.46
BDNF-218ENST00000533246 CNTN1Q12860 1018 aa12.15□□□□□ -0.46
BDNF-218ENST00000533246 FBXL22Q6P050 247 aa12.15□□□□□ -0.46
BDNF-218ENST00000533246 PRMT9Q6P2P2 845 aa12.15□□□□□ -0.46
BDNF-218ENST00000533246 B3GNT9Q6UX72 402 aa12.15□□□□□ -0.46
BDNF-218ENST00000533246 ZCCHC7Q8N3Z6 543 aaKnown RBP12.15□□□□□ -0.46
BDNF-218ENST00000533246 TAMM41Q96BW9 452 aa12.15□□□□□ -0.46
BDNF-218ENST00000533246 OSBPL6Q9BZF3 934 aa12.15□□□□□ -0.46
BDNF-218ENST00000533246 TRIM45Q9H8W5 580 aaPredicted RBP12.15□□□□□ -0.46
BDNF-218ENST00000533246 EIF2B4Q9UI10 523 aaKnown RBP12.15□□□□□ -0.46
BDNF-218ENST00000533246 PPM1HQ9ULR3 514 aa12.15□□□□□ -0.46
BDNF-218ENST00000533246 CICQ96RK0 1608 aaPredicted RBP12.15□□□□□ -0.46
BDNF-218ENST00000533246 A0A087WXM4 84 aa12.15□□□□□ -0.46
BDNF-218ENST00000533246 A0A1W2PQ72 361 aa12.15□□□□□ -0.46
BDNF-218ENST00000533246 SLC9A3P48764 834 aa12.15□□□□□ -0.46
BDNF-218ENST00000533246 POLR2LP62875 67 aaKnown RBP12.15□□□□□ -0.46
BDNF-218ENST00000533246 FNDC3BQ53EP0 1204 aaKnown RBP12.15□□□□□ -0.46
BDNF-218ENST00000533246 IL23RQ5VWK5 629 aa12.15□□□□□ -0.46
BDNF-218ENST00000533246 SULT1C3Q6IMI6 304 aa12.15□□□□□ -0.46
BDNF-218ENST00000533246 PAQR3Q6TCH7 311 aa12.15□□□□□ -0.46
BDNF-218ENST00000533246 ZYG11AQ6WRX3 759 aa12.15□□□□□ -0.46
BDNF-218ENST00000533246 FRMD7Q6ZUT3 714 aa12.15□□□□□ -0.46
BDNF-218ENST00000533246 ADAMTSL2Q86TH1 951 aa12.15□□□□□ -0.46
BDNF-218ENST00000533246 TBC1D19Q8N5T2 526 aa12.15□□□□□ -0.46
BDNF-218ENST00000533246 RDH11Q8TC12 318 aa12.15□□□□□ -0.46
BDNF-218ENST00000533246 COL26A1Q96A83 441 aa12.15□□□□□ -0.46
BDNF-218ENST00000533246 PRR11Q96HE9 360 aaPredicted RBP12.15□□□□□ -0.46
BDNF-218ENST00000533246 CDK15Q96Q40 435 aa12.15□□□□□ -0.46
BDNF-218ENST00000533246 UGT2B28Q9BY64 529 aa12.15□□□□□ -0.46
BDNF-218ENST00000533246 NUP98P52948 1817 aa12.15□□□□□ -0.46
BDNF-218ENST00000533246 OR2AG2A6NM03 316 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms