RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 TMPRSS9Q7Z410 1059 aa29.93■■■□□ 2.38
SSSCA1-207ENST00000533115 ZNF248Q8NDW4 579 aa29.93■■■□□ 2.38
SSSCA1-207ENST00000533115 SLC37A2Q8TED4 501 aa29.93■■■□□ 2.38
SSSCA1-207ENST00000533115 GUCA1BQ9UMX6 200 aa29.93■■■□□ 2.38
SSSCA1-207ENST00000533115 NBEAQ8NFP9 2946 aa29.93■■■□□ 2.38
SSSCA1-207ENST00000533115 PLD2O14939 933 aa29.92■■■□□ 2.38
SSSCA1-207ENST00000533115 VEGFDO43915 354 aa29.92■■■□□ 2.38
SSSCA1-207ENST00000533115 CPNE6O95741 557 aa29.92■■■□□ 2.38
SSSCA1-207ENST00000533115 MLLT3P42568 568 aaPredicted RBP29.92■■■□□ 2.38
SSSCA1-207ENST00000533115 FASLGP48023 281 aa29.92■■■□□ 2.38
SSSCA1-207ENST00000533115 CCDC173Q0VFZ6 552 aa29.92■■■□□ 2.38
SSSCA1-207ENST00000533115 MAP9Q49MG5 647 aa29.92■■■□□ 2.38
SSSCA1-207ENST00000533115 RAB11FIP2Q7L804 512 aa29.92■■■□□ 2.38
SSSCA1-207ENST00000533115 PIM3Q86V86 326 aa29.92■■■□□ 2.38
SSSCA1-207ENST00000533115 FBXO39Q8N4B4 442 aa29.92■■■□□ 2.38
SSSCA1-207ENST00000533115 CCDC112Q8NEF3 446 aa29.92■■■□□ 2.38
SSSCA1-207ENST00000533115 PPP1R2P1Q96PQ5 205 aa29.92■■■□□ 2.38
SSSCA1-207ENST00000533115 PKP3Q9Y446 797 aa29.92■■■□□ 2.38
SSSCA1-207ENST00000533115 C5orf60A6NFR6 353 aa29.91■■■□□ 2.38
SSSCA1-207ENST00000533115 BUD23O43709 281 aaKnown RBP29.91■■■□□ 2.38
SSSCA1-207ENST00000533115 PPFIA2O75334 1257 aa29.91■■■□□ 2.38
SSSCA1-207ENST00000533115 MTX2O75431 263 aa29.91■■■□□ 2.38
SSSCA1-207ENST00000533115 TNFSF15O95150 251 aa29.91■■■□□ 2.38
SSSCA1-207ENST00000533115 CLCNKAP51800 687 aa29.91■■■□□ 2.38
SSSCA1-207ENST00000533115 OLIG2Q13516 323 aa29.91■■■□□ 2.38
SSSCA1-207ENST00000533115 CLPPQ16740 277 aaPredicted RBP29.91■■■□□ 2.38
SSSCA1-207ENST00000533115 IYDQ6PHW0 289 aa29.91■■■□□ 2.38
SSSCA1-207ENST00000533115 SLITRK4Q8IW52 837 aa29.91■■■□□ 2.38
SSSCA1-207ENST00000533115 APOL2Q9BQE5 337 aa29.91■■■□□ 2.38
SSSCA1-207ENST00000533115 RDH14Q9HBH5 336 aa29.91■■■□□ 2.38
SSSCA1-207ENST00000533115 KLC4Q9NSK0 619 aa29.91■■■□□ 2.38
SSSCA1-207ENST00000533115 R3HDM2Q9Y2K5 976 aaKnown RBP29.91■■■□□ 2.38
SSSCA1-207ENST00000533115 A6NCN8 305 aa29.9■■■□□ 2.38
SSSCA1-207ENST00000533115 CDRT15L2A8MXV6 281 aa29.9■■■□□ 2.38
SSSCA1-207ENST00000533115 SNX2O60749 519 aa29.9■■■□□ 2.38
SSSCA1-207ENST00000533115 CDK14O94921 469 aa29.9■■■□□ 2.38
SSSCA1-207ENST00000533115 CD1CP29017 333 aa29.9■■■□□ 2.38
SSSCA1-207ENST00000533115 KHDC1Q4VXA5 237 aaKnown RBP29.9■■■□□ 2.38
SSSCA1-207ENST00000533115 CRTC3Q6UUV7 619 aa29.9■■■□□ 2.38
SSSCA1-207ENST00000533115 FAM151BQ6UXP7 276 aa29.9■■■□□ 2.38
SSSCA1-207ENST00000533115 USP53Q70EK8 1073 aa29.9■■■□□ 2.38
SSSCA1-207ENST00000533115 LRRTM4Q86VH4 590 aa29.9■■■□□ 2.38
SSSCA1-207ENST00000533115 GDAP1Q8TB36 358 aa29.9■■■□□ 2.38
SSSCA1-207ENST00000533115 UBE2Q2Q8WVN8 375 aa29.9■■■□□ 2.38
SSSCA1-207ENST00000533115 SEMA6CQ9H3T2 930 aa29.9■■■□□ 2.38
SSSCA1-207ENST00000533115 KCNK4Q9NYG8 393 aa29.9■■■□□ 2.38
SSSCA1-207ENST00000533115 GLYATL1P3A0A0U1RQE8 302 aa29.89■■■□□ 2.38
SSSCA1-207ENST00000533115 TCRBV7S2A1N4TA0A589 114 aa29.89■■■□□ 2.38
SSSCA1-207ENST00000533115 KMOO15229 486 aa29.89■■■□□ 2.38
SSSCA1-207ENST00000533115 STX7O15400 261 aaKnown RBP29.89■■■□□ 2.38
SSSCA1-207ENST00000533115 ITGA2BP08514 1039 aa29.89■■■□□ 2.38
SSSCA1-207ENST00000533115 SLC2A4P14672 509 aa29.89■■■□□ 2.38
SSSCA1-207ENST00000533115 UGT1A5P35504 534 aa29.89■■■□□ 2.38
SSSCA1-207ENST00000533115 CHRNA6Q15825 494 aa29.89■■■□□ 2.38
SSSCA1-207ENST00000533115 CHCHD2P9Q5T1J5 151 aaPredicted RBP29.89■■■□□ 2.38
SSSCA1-207ENST00000533115 FAM71DQ8N9W8 422 aa29.89■■■□□ 2.38
SSSCA1-207ENST00000533115 NUDT22Q9BRQ3 303 aa29.89■■■□□ 2.38
SSSCA1-207ENST00000533115 SLC23A2Q9UGH3 650 aa29.89■■■□□ 2.38
SSSCA1-207ENST00000533115 ARL5AQ9Y689 179 aa29.89■■■□□ 2.38
SSSCA1-207ENST00000533115 IGHV1OR21-1A0A087WYE8 117 aa29.88■■■□□ 2.37
SSSCA1-207ENST00000533115 C2orf81A6NN90 581 aa29.88■■■□□ 2.37
SSSCA1-207ENST00000533115 F3P13726 295 aa29.88■■■□□ 2.37
SSSCA1-207ENST00000533115 TMEM115Q12893 351 aaPredicted RBP29.88■■■□□ 2.37
SSSCA1-207ENST00000533115 SQSTM1Q13501 440 aa29.88■■■□□ 2.37
SSSCA1-207ENST00000533115 TAF1AQ15573 450 aaPredicted RBP29.88■■■□□ 2.37
SSSCA1-207ENST00000533115 INSCQ1MX18 579 aa29.88■■■□□ 2.37
SSSCA1-207ENST00000533115 PLA2G4EQ3MJ16 856 aa29.88■■■□□ 2.37
SSSCA1-207ENST00000533115 PHF19Q5T6S3 580 aa29.88■■■□□ 2.37
SSSCA1-207ENST00000533115 ARHGEF18Q6ZSZ5 1173 aa29.88■■■□□ 2.37
SSSCA1-207ENST00000533115 CLEC14AQ86T13 490 aa29.88■■■□□ 2.37
SSSCA1-207ENST00000533115 PDZD3Q86UT5 571 aa29.88■■■□□ 2.37
SSSCA1-207ENST00000533115 SPACA3Q8IXA5 215 aa29.88■■■□□ 2.37
SSSCA1-207ENST00000533115 SLC35B2Q8TB61 432 aa29.88■■■□□ 2.37
SSSCA1-207ENST00000533115 BRSK1Q8TDC3 778 aa29.88■■■□□ 2.37
SSSCA1-207ENST00000533115 TMEM159Q96B96 161 aa29.88■■■□□ 2.37
SSSCA1-207ENST00000533115 CRELD1Q96HD1 420 aa29.88■■■□□ 2.37
SSSCA1-207ENST00000533115 NAF1Q96HR8 494 aaKnown RBP29.88■■■□□ 2.37
SSSCA1-207ENST00000533115 SLC38A3Q99624 504 aa29.88■■■□□ 2.37
SSSCA1-207ENST00000533115 SARS2Q9NP81 518 aaKnown RBP29.88■■■□□ 2.37
SSSCA1-207ENST00000533115 LOXL2Q9Y4K0 774 aa29.88■■■□□ 2.37
SSSCA1-207ENST00000533115 KIR2DS5A0A0G2JLQ3 304 aa29.87■■■□□ 2.37
SSSCA1-207ENST00000533115 A0A0G2JNG1 304 aa29.87■■■□□ 2.37
SSSCA1-207ENST00000533115 KIR2DS3K7RE56 304 aa29.87■■■□□ 2.37
SSSCA1-207ENST00000533115 UGT1A9O60656 530 aa29.87■■■□□ 2.37
SSSCA1-207ENST00000533115 HGFP14210 728 aa29.87■■■□□ 2.37
SSSCA1-207ENST00000533115 ZNF7P17097 686 aaPredicted RBP29.87■■■□□ 2.37
SSSCA1-207ENST00000533115 UGT1A6P19224 532 aa29.87■■■□□ 2.37
SSSCA1-207ENST00000533115 LPOP22079 712 aaPredicted RBP29.87■■■□□ 2.37
SSSCA1-207ENST00000533115 UGT1A1P22309 533 aa29.87■■■□□ 2.37
SSSCA1-207ENST00000533115 UGT1A4P22310 534 aa29.87■■■□□ 2.37
SSSCA1-207ENST00000533115 UGT1A3P35503 534 aa29.87■■■□□ 2.37
SSSCA1-207ENST00000533115 HHEXQ03014 270 aa29.87■■■□□ 2.37
SSSCA1-207ENST00000533115 ITGA9Q13797 1035 aa29.87■■■□□ 2.37
SSSCA1-207ENST00000533115 PTPRCAPQ14761 206 aa29.87■■■□□ 2.37
SSSCA1-207ENST00000533115 KIR2DS5Q14953 304 aa29.87■■■□□ 2.37
SSSCA1-207ENST00000533115 PARP6Q2NL67 630 aa29.87■■■□□ 2.37
SSSCA1-207ENST00000533115 SEL1L2Q5TEA6 688 aa29.87■■■□□ 2.37
SSSCA1-207ENST00000533115 NKAIN2Q5VXU1 208 aa29.87■■■□□ 2.37
SSSCA1-207ENST00000533115 ZNF574Q6ZN55 896 aaPredicted RBP29.87■■■□□ 2.37
SSSCA1-207ENST00000533115 SLC9B2Q86UD5 537 aa29.87■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 666.6 ms