RNA–Protein interactions for RNA: ENST00000532800.1

RPUSD4-207, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,030 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-207ENST00000532800 STK17BO94768 372 aa16.86■□□□□ 0.29
RPUSD4-207ENST00000532800 SLC25A14O95258 325 aaPredicted RBP16.86■□□□□ 0.29
RPUSD4-207ENST00000532800 PRKAR1AP10644 381 aa16.86■□□□□ 0.29
RPUSD4-207ENST00000532800 SLC2A4P14672 509 aa16.86■□□□□ 0.29
RPUSD4-207ENST00000532800 HNRNPH3P31942 346 aaKnown RBP16.86■□□□□ 0.29
RPUSD4-207ENST00000532800 AP1B1Q10567 949 aa16.86■□□□□ 0.29
RPUSD4-207ENST00000532800 KCNAB2Q13303 367 aa16.86■□□□□ 0.29
RPUSD4-207ENST00000532800 PCSK7Q16549 785 aa16.86■□□□□ 0.29
RPUSD4-207ENST00000532800 SLC18A3Q16572 532 aa16.86■□□□□ 0.29
RPUSD4-207ENST00000532800 CEACAM20Q6UY09 585 aa16.86■□□□□ 0.29
RPUSD4-207ENST00000532800 ADGRG6Q86SQ4 1221 aa16.86■□□□□ 0.29
RPUSD4-207ENST00000532800 SLC45A3Q96JT2 553 aa16.86■□□□□ 0.29
RPUSD4-207ENST00000532800 AGAP3Q96P47 875 aa16.86■□□□□ 0.29
RPUSD4-207ENST00000532800 PLEKHG4BQ96PX9 1271 aa16.86■□□□□ 0.29
RPUSD4-207ENST00000532800 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.86■□□□□ 0.29
RPUSD4-207ENST00000532800 ADNPQ9H2P0 1102 aa16.86■□□□□ 0.29
RPUSD4-207ENST00000532800 FBXO8Q9NRD0 319 aa16.86■□□□□ 0.29
RPUSD4-207ENST00000532800 SIDT1Q9NXL6 827 aaKnown RBP16.86■□□□□ 0.29
RPUSD4-207ENST00000532800 OGFRQ9NZT2 677 aa16.86■□□□□ 0.29
RPUSD4-207ENST00000532800 ZNF711Q9Y462 761 aa16.86■□□□□ 0.29
RPUSD4-207ENST00000532800 MN1Q10571 1320 aaPredicted RBP16.86■□□□□ 0.29
RPUSD4-207ENST00000532800 LILRA5A6NI73 299 aa16.85■□□□□ 0.29
RPUSD4-207ENST00000532800 GOLGA6L19H0YKK7 550 aa16.85■□□□□ 0.29
RPUSD4-207ENST00000532800 MTX2O75431 263 aa16.85■□□□□ 0.29
RPUSD4-207ENST00000532800 DCDC1P59894 354 aa16.85■□□□□ 0.29
RPUSD4-207ENST00000532800 ASTE1Q2TB18 679 aaPredicted RBP16.85■□□□□ 0.29
RPUSD4-207ENST00000532800 KHDC1Q4VXA5 237 aaKnown RBP16.85■□□□□ 0.29
RPUSD4-207ENST00000532800 SLC9A4Q6AI14 798 aa16.85■□□□□ 0.29
RPUSD4-207ENST00000532800 TMC3Q7Z5M5 1100 aa16.85■□□□□ 0.29
RPUSD4-207ENST00000532800 GLYATL1Q969I3 302 aa16.85■□□□□ 0.29
RPUSD4-207ENST00000532800 IMP4Q96G21 291 aaKnown RBP16.85■□□□□ 0.29
RPUSD4-207ENST00000532800 TRIM39Q9HCM9 518 aa16.85■□□□□ 0.29
RPUSD4-207ENST00000532800 DNAJC16Q9Y2G8 782 aa16.85■□□□□ 0.29
RPUSD4-207ENST00000532800 TMEM184BQ9Y519 407 aaPredicted RBP16.85■□□□□ 0.29
RPUSD4-207ENST00000532800 OR5K4A6NMS3 321 aa16.84■□□□□ 0.29
RPUSD4-207ENST00000532800 APOL1O14791 398 aa16.84■□□□□ 0.29
RPUSD4-207ENST00000532800 MTA2O94776 668 aa16.84■□□□□ 0.29
RPUSD4-207ENST00000532800 DLGAP3O95886 979 aa16.84■□□□□ 0.29
RPUSD4-207ENST00000532800 MT-CYBP00156 380 aaPredicted RBP16.84■□□□□ 0.29
RPUSD4-207ENST00000532800 TMEM253P0C7T8 217 aa16.84■□□□□ 0.29
RPUSD4-207ENST00000532800 TYRP1P17643 537 aa16.84■□□□□ 0.29
RPUSD4-207ENST00000532800 MAP4P27816 1152 aaKnown RBP16.84■□□□□ 0.29
RPUSD4-207ENST00000532800 OAS2P29728 719 aaKnown RBP16.84■□□□□ 0.29
RPUSD4-207ENST00000532800 SLC19A1P41440 591 aa16.84■□□□□ 0.29
RPUSD4-207ENST00000532800 CCR10P46092 362 aa16.84■□□□□ 0.29
RPUSD4-207ENST00000532800 CLCNKAP51800 687 aa16.84■□□□□ 0.29
RPUSD4-207ENST00000532800 TLE1Q04724 770 aa16.84■□□□□ 0.29
RPUSD4-207ENST00000532800 CDC20Q12834 499 aa16.84■□□□□ 0.29
RPUSD4-207ENST00000532800 SEPT7Q16181 437 aaKnown RBP16.84■□□□□ 0.29
RPUSD4-207ENST00000532800 INSCQ1MX18 579 aa16.84■□□□□ 0.29
RPUSD4-207ENST00000532800 ATP1A1-AS1Q5TC04 95 aa16.84■□□□□ 0.29
RPUSD4-207ENST00000532800 NT5DC3Q86UY8 548 aa16.84■□□□□ 0.29
RPUSD4-207ENST00000532800 TRAM1L1Q8N609 369 aa16.84■□□□□ 0.29
RPUSD4-207ENST00000532800 SPATA22Q8NHS9 363 aa16.84■□□□□ 0.29
RPUSD4-207ENST00000532800 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.84■□□□□ 0.29
RPUSD4-207ENST00000532800 KIAA1143Q96AT1 154 aaPredicted RBP16.84■□□□□ 0.29
RPUSD4-207ENST00000532800 TADA1Q96BN2 335 aa16.84■□□□□ 0.29
RPUSD4-207ENST00000532800 OLFM3Q96PB7 478 aa16.84■□□□□ 0.29
RPUSD4-207ENST00000532800 ZPBPQ9BS86 351 aa16.84■□□□□ 0.29
RPUSD4-207ENST00000532800 ZSCAN5AQ9BUG6 496 aa16.84■□□□□ 0.29
RPUSD4-207ENST00000532800 XPO4Q9C0E2 1151 aaKnown RBP16.84■□□□□ 0.29
RPUSD4-207ENST00000532800 EPB41L1Q9H4G0 881 aa16.84■□□□□ 0.29
RPUSD4-207ENST00000532800 MAGEE1Q9HCI5 957 aa16.84■□□□□ 0.29
RPUSD4-207ENST00000532800 ZNF624Q9P2J8 865 aaPredicted RBP16.84■□□□□ 0.29
RPUSD4-207ENST00000532800 NFKBIL1Q9UBC1 381 aaPredicted RBP16.84■□□□□ 0.29
RPUSD4-207ENST00000532800 LCMT1Q9UIC8 334 aa16.84■□□□□ 0.29
RPUSD4-207ENST00000532800 SLC30A1Q9Y6M5 507 aa16.84■□□□□ 0.29
RPUSD4-207ENST00000532800 ZNF487B1APH4 448 aa16.83■□□□□ 0.28
RPUSD4-207ENST00000532800 AURKAO14965 403 aa16.83■□□□□ 0.28
RPUSD4-207ENST00000532800 MAST4O15021 2626 aa16.83■□□□□ 0.28
RPUSD4-207ENST00000532800 CHUKO15111 745 aa16.83■□□□□ 0.28
RPUSD4-207ENST00000532800 POLR1CO15160 346 aaPredicted RBP16.83■□□□□ 0.28
RPUSD4-207ENST00000532800 KRT1P04264 644 aa16.83■□□□□ 0.28
RPUSD4-207ENST00000532800 ANKRD34CP0C6C1 535 aa16.83■□□□□ 0.28
RPUSD4-207ENST00000532800 ZNF28P17035 718 aa16.83■□□□□ 0.28
RPUSD4-207ENST00000532800 BPIP17213 487 aa16.83■□□□□ 0.28
RPUSD4-207ENST00000532800 NOP2P46087 812 aaKnown RBP16.83■□□□□ 0.28
RPUSD4-207ENST00000532800 DYNLT1P63172 113 aa16.83■□□□□ 0.28
RPUSD4-207ENST00000532800 CDK18Q07002 472 aa16.83■□□□□ 0.28
RPUSD4-207ENST00000532800 ABHD18Q0P651 414 aa16.83■□□□□ 0.28
RPUSD4-207ENST00000532800 SKIDA1Q1XH10 827 aa16.83■□□□□ 0.28
RPUSD4-207ENST00000532800 TMEM26Q6ZUK4 368 aa16.83■□□□□ 0.28
RPUSD4-207ENST00000532800 LRRTM4Q86VH4 590 aa16.83■□□□□ 0.28
RPUSD4-207ENST00000532800 PLXDC1Q8IUK5 500 aa16.83■□□□□ 0.28
RPUSD4-207ENST00000532800 ZNF547Q8IVP9 402 aa16.83■□□□□ 0.28
RPUSD4-207ENST00000532800 SLC35G2Q8TBE7 412 aa16.83■□□□□ 0.28
RPUSD4-207ENST00000532800 STARD8Q92502 1023 aa16.83■□□□□ 0.28
RPUSD4-207ENST00000532800 C9orf72Q96LT7 481 aa16.83■□□□□ 0.28
RPUSD4-207ENST00000532800 CATSPER2Q96P56 530 aa16.83■□□□□ 0.28
RPUSD4-207ENST00000532800 TGM7Q96PF1 710 aa16.83■□□□□ 0.28
RPUSD4-207ENST00000532800 GPR63Q9BZJ6 419 aa16.83■□□□□ 0.28
RPUSD4-207ENST00000532800 SLC25A51Q9H1U9 297 aa16.83■□□□□ 0.28
RPUSD4-207ENST00000532800 DEF6Q9H4E7 631 aa16.83■□□□□ 0.28
RPUSD4-207ENST00000532800 TMPRSS11EQ9UL52 423 aa16.83■□□□□ 0.28
RPUSD4-207ENST00000532800 SPO11Q9Y5K1 396 aa16.83■□□□□ 0.28
RPUSD4-207ENST00000532800 MRPS18BQ9Y676 258 aaKnown RBP16.83■□□□□ 0.28
RPUSD4-207ENST00000532800 PTPN13Q12923 2485 aa16.82■□□□□ 0.28
RPUSD4-207ENST00000532800 PRR19A6NJB7 356 aa16.82■□□□□ 0.28
RPUSD4-207ENST00000532800 PDZK1P1A8MUH7 402 aa16.82■□□□□ 0.28
RPUSD4-207ENST00000532800 GPR89AB7ZAQ6 455 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms