RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 ATP13A5Q4VNC0 1218 aa17.59■□□□□ 0.41
SMG1-203ENST00000532700 PID1Q7Z2X4 250 aa17.59■□□□□ 0.41
SMG1-203ENST00000532700 PIM3Q86V86 326 aa17.59■□□□□ 0.41
SMG1-203ENST00000532700 USP7Q93009 1102 aa17.59■□□□□ 0.41
SMG1-203ENST00000532700 CCDC97Q96F63 343 aaPredicted RBP17.59■□□□□ 0.41
SMG1-203ENST00000532700 RBM41Q96IZ5 413 aaKnown RBP17.59■□□□□ 0.41
SMG1-203ENST00000532700 CALR3Q96L12 384 aaKnown RBP17.59■□□□□ 0.41
SMG1-203ENST00000532700 FCRL5Q96RD9 977 aa17.59■□□□□ 0.41
SMG1-203ENST00000532700 CARD9Q9H257 536 aa17.59■□□□□ 0.41
SMG1-203ENST00000532700 PCDHGA7Q9Y5G6 932 aa17.59■□□□□ 0.41
SMG1-203ENST00000532700 APOC4-APOC2K7ER74 178 aa17.58■□□□□ 0.4
SMG1-203ENST00000532700 CHUKO15111 745 aa17.58■□□□□ 0.4
SMG1-203ENST00000532700 APOC2P02655 101 aa17.58■□□□□ 0.4
SMG1-203ENST00000532700 JMJD7P0C870 316 aa17.58■□□□□ 0.4
SMG1-203ENST00000532700 FGF3P11487 239 aaPredicted RBP17.58■□□□□ 0.4
SMG1-203ENST00000532700 CTNNA2P26232 953 aa17.58■□□□□ 0.4
SMG1-203ENST00000532700 LIMK2P53671 638 aa17.58■□□□□ 0.4
SMG1-203ENST00000532700 TMPRSS3P57727 454 aa17.58■□□□□ 0.4
SMG1-203ENST00000532700 EIF3IQ13347 325 aaKnown RBP17.58■□□□□ 0.4
SMG1-203ENST00000532700 NFATC2Q13469 925 aa17.58■□□□□ 0.4
SMG1-203ENST00000532700 SLC1A5Q15758 541 aa17.58■□□□□ 0.4
SMG1-203ENST00000532700 KIAA1614Q5VZ46 1190 aa17.58■□□□□ 0.4
SMG1-203ENST00000532700 IYDQ6PHW0 289 aa17.58■□□□□ 0.4
SMG1-203ENST00000532700 C11orf96Q7Z7L8 435 aa17.58■□□□□ 0.4
SMG1-203ENST00000532700 UBL7Q96S82 380 aaPredicted RBP17.58■□□□□ 0.4
SMG1-203ENST00000532700 APOL2Q9BQE5 337 aa17.58■□□□□ 0.4
SMG1-203ENST00000532700 ZSCAN5AQ9BUG6 496 aa17.58■□□□□ 0.4
SMG1-203ENST00000532700 DPH1Q9BZG8 443 aa17.58■□□□□ 0.4
SMG1-203ENST00000532700 IL26Q9NPH9 171 aa17.58■□□□□ 0.4
SMG1-203ENST00000532700 KLC4Q9NSK0 619 aa17.58■□□□□ 0.4
SMG1-203ENST00000532700 KCNK4Q9NYG8 393 aa17.58■□□□□ 0.4
SMG1-203ENST00000532700 KCTD3Q9Y597 815 aa17.58■□□□□ 0.4
SMG1-203ENST00000532700 H7C0C1 242 aa17.57■□□□□ 0.4
SMG1-203ENST00000532700 ATXN7O15265 892 aaPredicted RBP17.57■□□□□ 0.4
SMG1-203ENST00000532700 UGT1A9O60656 530 aa17.57■□□□□ 0.4
SMG1-203ENST00000532700 THRAP10827 490 aa17.57■□□□□ 0.4
SMG1-203ENST00000532700 UGT1A6P19224 532 aa17.57■□□□□ 0.4
SMG1-203ENST00000532700 UGT1A1P22309 533 aa17.57■□□□□ 0.4
SMG1-203ENST00000532700 UGT1A4P22310 534 aa17.57■□□□□ 0.4
SMG1-203ENST00000532700 UGT1A3P35503 534 aa17.57■□□□□ 0.4
SMG1-203ENST00000532700 MLLT3P42568 568 aaPredicted RBP17.57■□□□□ 0.4
SMG1-203ENST00000532700 GPR3P46089 330 aa17.57■□□□□ 0.4
SMG1-203ENST00000532700 ATP5OP48047 213 aa17.57■□□□□ 0.4
SMG1-203ENST00000532700 VAV2P52735 878 aa17.57■□□□□ 0.4
SMG1-203ENST00000532700 HHEXQ03014 270 aa17.57■□□□□ 0.4
SMG1-203ENST00000532700 CHRNA6Q15825 494 aa17.57■□□□□ 0.4
SMG1-203ENST00000532700 KIAA1328Q86T90 577 aa17.57■□□□□ 0.4
SMG1-203ENST00000532700 VASH2Q86V25 355 aa17.57■□□□□ 0.4
SMG1-203ENST00000532700 CCDC112Q8NEF3 446 aa17.57■□□□□ 0.4
SMG1-203ENST00000532700 ANP32BQ92688 251 aaKnown RBP17.57■□□□□ 0.4
SMG1-203ENST00000532700 PLEKHG4BQ96PX9 1271 aa17.57■□□□□ 0.4
SMG1-203ENST00000532700 FICDQ9BVA6 458 aa17.57■□□□□ 0.4
SMG1-203ENST00000532700 TBC1D10AQ9BXI6 508 aa17.57■□□□□ 0.4
SMG1-203ENST00000532700 OSBPL8Q9BZF1 889 aa17.57■□□□□ 0.4
SMG1-203ENST00000532700 SEMA4CQ9C0C4 833 aa17.57■□□□□ 0.4
SMG1-203ENST00000532700 GBA3Q9H227 469 aa17.57■□□□□ 0.4
SMG1-203ENST00000532700 UGT1A7Q9HAW7 530 aa17.57■□□□□ 0.4
SMG1-203ENST00000532700 UGT1A10Q9HAW8 530 aa17.57■□□□□ 0.4
SMG1-203ENST00000532700 UGT1A8Q9HAW9 530 aa17.57■□□□□ 0.4
SMG1-203ENST00000532700 TRIM39Q9HCM9 518 aa17.57■□□□□ 0.4
SMG1-203ENST00000532700 OCIAD1Q9NX40 245 aa17.57■□□□□ 0.4
SMG1-203ENST00000532700 OGFRQ9NZT2 677 aa17.57■□□□□ 0.4
SMG1-203ENST00000532700 IL17CQ9P0M4 197 aa17.57■□□□□ 0.4
SMG1-203ENST00000532700 RSPH14Q9UHP6 348 aa17.57■□□□□ 0.4
SMG1-203ENST00000532700 DNAJC16Q9Y2G8 782 aa17.57■□□□□ 0.4
SMG1-203ENST00000532700 TCRBV7S2A1N4TA0A589 114 aa17.56■□□□□ 0.4
SMG1-203ENST00000532700 MACROD2A1Z1Q3 448 aa17.56■□□□□ 0.4
SMG1-203ENST00000532700 BTNL10A8MVZ5 291 aa17.56■□□□□ 0.4
SMG1-203ENST00000532700 NRDCO43847 1150 aa17.56■□□□□ 0.4
SMG1-203ENST00000532700 F3P13726 295 aa17.56■□□□□ 0.4
SMG1-203ENST00000532700 BRAFP15056 766 aa17.56■□□□□ 0.4
SMG1-203ENST00000532700 PSMB4P28070 264 aa17.56■□□□□ 0.4
SMG1-203ENST00000532700 PTPN7P35236 360 aa17.56■□□□□ 0.4
SMG1-203ENST00000532700 ADRA1AP35348 466 aa17.56■□□□□ 0.4
SMG1-203ENST00000532700 HMGCLP35914 325 aa17.56■□□□□ 0.4
SMG1-203ENST00000532700 CTSCP53634 463 aa17.56■□□□□ 0.4
SMG1-203ENST00000532700 UBE2IP63279 158 aaKnown RBP17.56■□□□□ 0.4
SMG1-203ENST00000532700 MSLNQ13421 630 aaPredicted RBP17.56■□□□□ 0.4
SMG1-203ENST00000532700 SQSTM1Q13501 440 aa17.56■□□□□ 0.4
SMG1-203ENST00000532700 SEPT7Q16181 437 aaKnown RBP17.56■□□□□ 0.4
SMG1-203ENST00000532700 XKR5Q6UX68 686 aa17.56■□□□□ 0.4
SMG1-203ENST00000532700 FAM151BQ6UXP7 276 aa17.56■□□□□ 0.4
SMG1-203ENST00000532700 BZW1Q7L1Q6 419 aaKnown RBP17.56■□□□□ 0.4
SMG1-203ENST00000532700 BLOC1S5Q8TDH9 187 aa17.56■□□□□ 0.4
SMG1-203ENST00000532700 TTC9Q92623 222 aa17.56■□□□□ 0.4
SMG1-203ENST00000532700 RNF31Q96EP0 1072 aa17.56■□□□□ 0.4
SMG1-203ENST00000532700 OSGEPL1Q9H4B0 414 aa17.56■□□□□ 0.4
SMG1-203ENST00000532700 RMI1Q9H9A7 625 aa17.56■□□□□ 0.4
SMG1-203ENST00000532700 ZNF624Q9P2J8 865 aaPredicted RBP17.56■□□□□ 0.4
SMG1-203ENST00000532700 ACSL6Q9UKU0 697 aa17.56■□□□□ 0.4
SMG1-203ENST00000532700 ARL5AQ9Y689 179 aa17.56■□□□□ 0.4
SMG1-203ENST00000532700 TEX51A0A1B0GUA7 166 aa17.55■□□□□ 0.4
SMG1-203ENST00000532700 HACD1B0YJ81 288 aa17.55■□□□□ 0.4
SMG1-203ENST00000532700 TMX2-CTNND1H3BSU7 103 aa17.55■□□□□ 0.4
SMG1-203ENST00000532700 NVLO15381 856 aaKnown RBP17.55■□□□□ 0.4
SMG1-203ENST00000532700 DDX3YO15523 660 aaKnown RBP17.55■□□□□ 0.4
SMG1-203ENST00000532700 FTCDO95954 541 aa17.55■□□□□ 0.4
SMG1-203ENST00000532700 ZNF7P17097 686 aaPredicted RBP17.55■□□□□ 0.4
SMG1-203ENST00000532700 DRG2P55039 364 aaKnown RBP17.55■□□□□ 0.4
SMG1-203ENST00000532700 NAP1L1P55209 391 aaKnown RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms