RNA–Protein interactions for RNA: ENST00000532457.5

PACSIN3-209, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-209ENST00000532457 ACOT9Q9Y305 439 aa21.76■■□□□ 1.07
PACSIN3-209ENST00000532457 PLXNA2O75051 1894 aa21.75■■□□□ 1.07
PACSIN3-209ENST00000532457 LAMTOR5O43504 91 aa21.75■■□□□ 1.07
PACSIN3-209ENST00000532457 C7P10643 843 aa21.75■■□□□ 1.07
PACSIN3-209ENST00000532457 PKMP14618 531 aaKnown RBP21.75■■□□□ 1.07
PACSIN3-209ENST00000532457 ADARP55265 1226 aaKnown RBP21.75■■□□□ 1.07
PACSIN3-209ENST00000532457 RNF187Q5TA31 235 aaPredicted RBP21.75■■□□□ 1.07
PACSIN3-209ENST00000532457 NRSN1Q8IZ57 195 aa21.75■■□□□ 1.07
PACSIN3-209ENST00000532457 CAMKK1Q8N5S9 505 aa21.75■■□□□ 1.07
PACSIN3-209ENST00000532457 FAM131CQ96AQ9 280 aa21.75■■□□□ 1.07
PACSIN3-209ENST00000532457 NXNL1Q96CM4 212 aa21.75■■□□□ 1.07
PACSIN3-209ENST00000532457 MRGPRX1Q96LB2 322 aa21.75■■□□□ 1.07
PACSIN3-209ENST00000532457 CAMSAP3Q9P1Y5 1249 aaPredicted RBP21.75■■□□□ 1.07
PACSIN3-209ENST00000532457 CORO1CQ9ULV4 474 aaPredicted RBP21.75■■□□□ 1.07
PACSIN3-209ENST00000532457 NUMA1Q14980 2115 aa21.75■■□□□ 1.07
PACSIN3-209ENST00000532457 IGLON5A6NGN9 336 aa21.74■■□□□ 1.07
PACSIN3-209ENST00000532457 K7ESM1 405 aa21.74■■□□□ 1.07
PACSIN3-209ENST00000532457 DLL1O00548 723 aa21.74■■□□□ 1.07
PACSIN3-209ENST00000532457 NIPSNAP2O75323 286 aa21.74■■□□□ 1.07
PACSIN3-209ENST00000532457 LSP1P33241 339 aa21.74■■□□□ 1.07
PACSIN3-209ENST00000532457 IRX4P78413 519 aa21.74■■□□□ 1.07
PACSIN3-209ENST00000532457 KHDC1Q4VXA5 237 aaKnown RBP21.74■■□□□ 1.07
PACSIN3-209ENST00000532457 ZNF648Q5T619 568 aaPredicted RBP21.74■■□□□ 1.07
PACSIN3-209ENST00000532457 C1orf210Q8IVY1 113 aa21.74■■□□□ 1.07
PACSIN3-209ENST00000532457 TMEM151AQ8N4L1 468 aa21.74■■□□□ 1.07
PACSIN3-209ENST00000532457 DTWD2Q8NBA8 298 aa21.74■■□□□ 1.07
PACSIN3-209ENST00000532457 ARMC2Q8NEN0 867 aa21.74■■□□□ 1.07
PACSIN3-209ENST00000532457 TSTD1Q8NFU3 115 aa21.74■■□□□ 1.07
PACSIN3-209ENST00000532457 DTX3LQ8TDB6 740 aa21.74■■□□□ 1.07
PACSIN3-209ENST00000532457 TBRG4Q969Z0 631 aaKnown RBP eCLIP21.74■■□□□ 1.07
PACSIN3-209ENST00000532457 CABS1Q96KC9 395 aa21.74■■□□□ 1.07
PACSIN3-209ENST00000532457 RUVBL2Q9Y230 463 aaKnown RBP21.74■■□□□ 1.07
PACSIN3-209ENST00000532457 DOCK9Q9BZ29 2069 aa21.74■■□□□ 1.07
PACSIN3-209ENST00000532457 TCRBV21S2A2A0A5A6 115 aa21.73■■□□□ 1.07
PACSIN3-209ENST00000532457 WDR91A4D1P6 747 aa21.73■■□□□ 1.07
PACSIN3-209ENST00000532457 PRMT5O14744 637 aaPredicted RBP21.73■■□□□ 1.07
PACSIN3-209ENST00000532457 AP1G1O43747 822 aa21.73■■□□□ 1.07
PACSIN3-209ENST00000532457 SOD1P00441 154 aa21.73■■□□□ 1.07
PACSIN3-209ENST00000532457 SLC12A2P55011 1212 aa21.73■■□□□ 1.07
PACSIN3-209ENST00000532457 INSCQ1MX18 579 aa21.73■■□□□ 1.07
PACSIN3-209ENST00000532457 CYP2U1Q7Z449 544 aa21.73■■□□□ 1.07
PACSIN3-209ENST00000532457 TRAM1L1Q8N609 369 aa21.73■■□□□ 1.07
PACSIN3-209ENST00000532457 CKAP2Q8WWK9 683 aa21.73■■□□□ 1.07
PACSIN3-209ENST00000532457 FUBP1Q96AE4 644 aaKnown RBP21.73■■□□□ 1.07
PACSIN3-209ENST00000532457 AP2M1Q96CW1 435 aa21.73■■□□□ 1.07
PACSIN3-209ENST00000532457 UBXN10Q96LJ8 280 aa21.73■■□□□ 1.07
PACSIN3-209ENST00000532457 IGSF5Q9NSI5 407 aa21.73■■□□□ 1.07
PACSIN3-209ENST00000532457 ZDHHC3Q9NYG2 299 aa21.73■■□□□ 1.07
PACSIN3-209ENST00000532457 CNOT6Q9ULM6 557 aaKnown RBP21.73■■□□□ 1.07
PACSIN3-209ENST00000532457 VPS9D1Q9Y2B5 631 aa21.73■■□□□ 1.07
PACSIN3-209ENST00000532457 IGLV3-16A0A075B6K0 115 aa21.73■■□□□ 1.07
PACSIN3-209ENST00000532457 LZTS3O60299 673 aaPredicted RBP21.73■■□□□ 1.07
PACSIN3-209ENST00000532457 PLIN3O60664 434 aa21.73■■□□□ 1.07
PACSIN3-209ENST00000532457 GLRA3O75311 464 aa21.73■■□□□ 1.07
PACSIN3-209ENST00000532457 MTX2O75431 263 aa21.73■■□□□ 1.07
PACSIN3-209ENST00000532457 RHOBTB1O94844 696 aa21.73■■□□□ 1.07
PACSIN3-209ENST00000532457 DNTTP04053 509 aa21.73■■□□□ 1.07
PACSIN3-209ENST00000532457 PROCP04070 461 aa21.73■■□□□ 1.07
PACSIN3-209ENST00000532457 NDUFV2P19404 249 aa21.73■■□□□ 1.07
PACSIN3-209ENST00000532457 NUBP1P53384 320 aa21.73■■□□□ 1.07
PACSIN3-209ENST00000532457 ITGA9Q13797 1035 aa21.73■■□□□ 1.07
PACSIN3-209ENST00000532457 GPRC6AQ5T6X5 926 aa21.73■■□□□ 1.07
PACSIN3-209ENST00000532457 HHATQ5VTY9 493 aa21.73■■□□□ 1.07
PACSIN3-209ENST00000532457 LYPLAL1Q5VWZ2 237 aa21.73■■□□□ 1.07
PACSIN3-209ENST00000532457 SEL1L3Q68CR1 1132 aa21.73■■□□□ 1.07
PACSIN3-209ENST00000532457 CXorf40AQ8TE69 158 aa21.73■■□□□ 1.07
PACSIN3-209ENST00000532457 GANCQ8TET4 914 aa21.73■■□□□ 1.07
PACSIN3-209ENST00000532457 SIPA1Q96FS4 1042 aa21.73■■□□□ 1.07
PACSIN3-209ENST00000532457 GPAMQ9HCL2 828 aa21.73■■□□□ 1.07
PACSIN3-209ENST00000532457 RAD18Q9NS91 495 aa21.73■■□□□ 1.07
PACSIN3-209ENST00000532457 ZFR2Q9UPR6 939 aaKnown RBP21.73■■□□□ 1.07
PACSIN3-209ENST00000532457 ANKRD6Q9Y2G4 727 aa21.73■■□□□ 1.07
PACSIN3-209ENST00000532457 TSPAN6O43657 245 aa21.72■■□□□ 1.07
PACSIN3-209ENST00000532457 PCDH8O95206 1070 aa21.72■■□□□ 1.07
PACSIN3-209ENST00000532457 ESR1P03372 595 aa21.72■■□□□ 1.07
PACSIN3-209ENST00000532457 SBK3P0C264 359 aa21.72■■□□□ 1.07
PACSIN3-209ENST00000532457 ZNF7P17097 686 aaPredicted RBP21.72■■□□□ 1.07
PACSIN3-209ENST00000532457 GABRG2P18507 467 aa21.72■■□□□ 1.07
PACSIN3-209ENST00000532457 SEC24CP53992 1094 aa21.72■■□□□ 1.07
PACSIN3-209ENST00000532457 PAQR3Q6TCH7 311 aa21.72■■□□□ 1.07
PACSIN3-209ENST00000532457 TAX1BP1Q86VP1 789 aa21.72■■□□□ 1.07
PACSIN3-209ENST00000532457 RBFAQ8N0V3 343 aa21.72■■□□□ 1.07
PACSIN3-209ENST00000532457 GIMAP7Q8NHV1 300 aa21.72■■□□□ 1.07
PACSIN3-209ENST00000532457 LKAAEAR1Q8TD35 194 aa21.72■■□□□ 1.07
PACSIN3-209ENST00000532457 TSPAN17Q96FV3 270 aa21.72■■□□□ 1.07
PACSIN3-209ENST00000532457 GPR21Q99679 349 aa21.72■■□□□ 1.07
PACSIN3-209ENST00000532457 MECRQ9BV79 373 aa21.72■■□□□ 1.07
PACSIN3-209ENST00000532457 IQCGQ9H095 443 aaKnown RBP21.72■■□□□ 1.07
PACSIN3-209ENST00000532457 CDH19Q9H159 772 aa21.72■■□□□ 1.07
PACSIN3-209ENST00000532457 PFDN6O15212 129 aa21.71■■□□□ 1.07
PACSIN3-209ENST00000532457 APBB3O95704 486 aa21.71■■□□□ 1.07
PACSIN3-209ENST00000532457 GSTA1P08263 222 aa21.71■■□□□ 1.07
PACSIN3-209ENST00000532457 CCDC166P0CW27 439 aa21.71■■□□□ 1.07
PACSIN3-209ENST00000532457 RPS3P23396 243 aaKnown RBP eCLIP21.71■■□□□ 1.07
PACSIN3-209ENST00000532457 FGL2Q14314 439 aa21.71■■□□□ 1.07
PACSIN3-209ENST00000532457 TAF1BQ53T94 588 aaPredicted RBP21.71■■□□□ 1.07
PACSIN3-209ENST00000532457 RAVER1Q8IY67 606 aaKnown RBP21.71■■□□□ 1.07
PACSIN3-209ENST00000532457 HEXDCQ8WVB3 486 aa21.71■■□□□ 1.07
PACSIN3-209ENST00000532457 BTN2A2Q8WVV5 523 aa21.71■■□□□ 1.07
PACSIN3-209ENST00000532457 NUS1Q96E22 293 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms