RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 NR0B2Q15466 257 aa13.77□□□□□ -0.21
TSPAN4-220ENST00000532375 HS1BP3Q53T59 392 aa13.77□□□□□ -0.21
TSPAN4-220ENST00000532375 CDCP2Q5VXM1 449 aa13.77□□□□□ -0.21
TSPAN4-220ENST00000532375 GSTA5Q7RTV2 222 aa13.77□□□□□ -0.21
TSPAN4-220ENST00000532375 MARCH9Q86YJ5 346 aa13.77□□□□□ -0.21
TSPAN4-220ENST00000532375 GALNT13Q8IUC8 556 aa13.77□□□□□ -0.21
TSPAN4-220ENST00000532375 PHYKPLQ8IUZ5 450 aa13.77□□□□□ -0.21
TSPAN4-220ENST00000532375 NAGSQ8N159 534 aa13.77□□□□□ -0.21
TSPAN4-220ENST00000532375 RASGEF1AQ8N9B8 481 aa13.77□□□□□ -0.21
TSPAN4-220ENST00000532375 STYXQ8WUJ0 223 aa13.77□□□□□ -0.21
TSPAN4-220ENST00000532375 PATE1Q8WXA2 126 aa13.77□□□□□ -0.21
TSPAN4-220ENST00000532375 SCG3Q8WXD2 468 aaKnown RBP13.77□□□□□ -0.21
TSPAN4-220ENST00000532375 LRRC45Q96CN5 670 aa13.77□□□□□ -0.21
TSPAN4-220ENST00000532375 ZNF778Q96MU6 729 aa13.77□□□□□ -0.21
TSPAN4-220ENST00000532375 RANBP9Q96S59 729 aa13.77□□□□□ -0.21
TSPAN4-220ENST00000532375 GSDMCQ9BYG8 508 aa13.77□□□□□ -0.21
TSPAN4-220ENST00000532375 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.77□□□□□ -0.21
TSPAN4-220ENST00000532375 NCKIPSDQ9NZQ3 722 aa13.77□□□□□ -0.21
TSPAN4-220ENST00000532375 GULP1Q9UBP9 304 aa13.77□□□□□ -0.21
TSPAN4-220ENST00000532375 ZNHIT2Q9UHR6 403 aa13.77□□□□□ -0.21
TSPAN4-220ENST00000532375 APPL1Q9UKG1 709 aa13.77□□□□□ -0.21
TSPAN4-220ENST00000532375 RIMKLBQ9ULI2 386 aa13.77□□□□□ -0.21
TSPAN4-220ENST00000532375 PIKFYVEQ9Y2I7 2098 aa13.77□□□□□ -0.21
TSPAN4-220ENST00000532375 NEUROG3Q9Y4Z2 214 aa13.77□□□□□ -0.21
TSPAN4-220ENST00000532375 SAR1BQ9Y6B6 198 aa13.77□□□□□ -0.21
TSPAN4-220ENST00000532375 OPA1O60313 960 aa13.76□□□□□ -0.21
TSPAN4-220ENST00000532375 CDK14O94921 469 aa13.76□□□□□ -0.21
TSPAN4-220ENST00000532375 PRAMEF1O95521 474 aa13.76□□□□□ -0.21
TSPAN4-220ENST00000532375 PRSS56P0CW18 603 aa13.76□□□□□ -0.21
TSPAN4-220ENST00000532375 CDK4P11802 303 aa13.76□□□□□ -0.21
TSPAN4-220ENST00000532375 TPSB2P20231 275 aa13.76□□□□□ -0.21
TSPAN4-220ENST00000532375 FNTAP49354 379 aa13.76□□□□□ -0.21
TSPAN4-220ENST00000532375 CTSCP53634 463 aa13.76□□□□□ -0.21
TSPAN4-220ENST00000532375 ETF1P62495 437 aaKnown RBP13.76□□□□□ -0.21
TSPAN4-220ENST00000532375 E2F1Q01094 437 aa13.76□□□□□ -0.21
TSPAN4-220ENST00000532375 GPS1Q13098 491 aa13.76□□□□□ -0.21
TSPAN4-220ENST00000532375 NFATC2Q13469 925 aa13.76□□□□□ -0.21
TSPAN4-220ENST00000532375 CAMK2BQ13554 666 aa13.76□□□□□ -0.21
TSPAN4-220ENST00000532375 ITGA9Q13797 1035 aa13.76□□□□□ -0.21
TSPAN4-220ENST00000532375 LRP8Q14114 963 aa13.76□□□□□ -0.21
TSPAN4-220ENST00000532375 TPSAB1Q15661 275 aa13.76□□□□□ -0.21
TSPAN4-220ENST00000532375 C14orf28Q4W4Y0 310 aa13.76□□□□□ -0.21
TSPAN4-220ENST00000532375 CCDC38Q502W7 563 aa13.76□□□□□ -0.21
TSPAN4-220ENST00000532375 CCDC157Q569K6 752 aa13.76□□□□□ -0.21
TSPAN4-220ENST00000532375 ANKRD22Q5VYY1 191 aa13.76□□□□□ -0.21
TSPAN4-220ENST00000532375 SLC30A9Q6PML9 568 aa13.76□□□□□ -0.21
TSPAN4-220ENST00000532375 XKR5Q6UX68 686 aa13.76□□□□□ -0.21
TSPAN4-220ENST00000532375 CCNI2Q6ZMN8 369 aaPredicted RBP13.76□□□□□ -0.21
TSPAN4-220ENST00000532375 CHST15Q7LFX5 561 aaPredicted RBP13.76□□□□□ -0.21
TSPAN4-220ENST00000532375 EFL1Q7Z2Z2 1120 aaKnown RBP13.76□□□□□ -0.21
TSPAN4-220ENST00000532375 CACTIN-AS1Q8N1I8 211 aa13.76□□□□□ -0.21
TSPAN4-220ENST00000532375 OR13J1Q8NGT2 312 aa13.76□□□□□ -0.21
TSPAN4-220ENST00000532375 IFI44Q8TCB0 444 aa13.76□□□□□ -0.21
TSPAN4-220ENST00000532375 CPT1BQ92523 772 aa13.76□□□□□ -0.21
TSPAN4-220ENST00000532375 SLCO2A1Q92959 643 aa13.76□□□□□ -0.21
TSPAN4-220ENST00000532375 DDX47Q9H0S4 455 aaKnown RBP13.76□□□□□ -0.21
TSPAN4-220ENST00000532375 DPEP2Q9H4A9 486 aa13.76□□□□□ -0.21
TSPAN4-220ENST00000532375 ASB8Q9H765 288 aa13.76□□□□□ -0.21
TSPAN4-220ENST00000532375 SIRPGQ9P1W8 387 aa13.76□□□□□ -0.21
TSPAN4-220ENST00000532375 SLC2A6Q9UGQ3 507 aa13.76□□□□□ -0.21
TSPAN4-220ENST00000532375 PCYOX1Q9UHG3 505 aa13.76□□□□□ -0.21
TSPAN4-220ENST00000532375 ANGPTL2Q9UKU9 493 aa13.76□□□□□ -0.21
TSPAN4-220ENST00000532375 DOLKQ9UPQ8 538 aa13.76□□□□□ -0.21
TSPAN4-220ENST00000532375 MSRB2Q9Y3D2 182 aa13.76□□□□□ -0.21
TSPAN4-220ENST00000532375 TPRP12270 2363 aaKnown RBP13.76□□□□□ -0.21
TSPAN4-220ENST00000532375 IGLV3-16A0A075B6K0 115 aa13.75□□□□□ -0.21
TSPAN4-220ENST00000532375 CPED1A4D0V7 1026 aa13.75□□□□□ -0.21
TSPAN4-220ENST00000532375 CTAGE9A4FU28 777 aa13.75□□□□□ -0.21
TSPAN4-220ENST00000532375 E7EVH7 732 aa13.75□□□□□ -0.21
TSPAN4-220ENST00000532375 CAPNS1P04632 268 aa13.75□□□□□ -0.21
TSPAN4-220ENST00000532375 ADRA1DP25100 572 aa13.75□□□□□ -0.21
TSPAN4-220ENST00000532375 IVDP26440 423 aa13.75□□□□□ -0.21
TSPAN4-220ENST00000532375 HADHAP40939 763 aa13.75□□□□□ -0.21
TSPAN4-220ENST00000532375 ACTR1BP42025 376 aa13.75□□□□□ -0.21
TSPAN4-220ENST00000532375 RPIAP49247 311 aa13.75□□□□□ -0.21
TSPAN4-220ENST00000532375 VPS41P49754 854 aa13.75□□□□□ -0.21
TSPAN4-220ENST00000532375 ACTR1AP61163 376 aa13.75□□□□□ -0.21
TSPAN4-220ENST00000532375 BASP1P80723 227 aaKnown RBP13.75□□□□□ -0.21
TSPAN4-220ENST00000532375 CDK16Q00536 496 aa13.75□□□□□ -0.21
TSPAN4-220ENST00000532375 LDLRAP1Q5SW96 308 aa13.75□□□□□ -0.21
TSPAN4-220ENST00000532375 TSTD2Q5T7W7 516 aa13.75□□□□□ -0.21
TSPAN4-220ENST00000532375 LRRC8BQ6P9F7 803 aa13.75□□□□□ -0.21
TSPAN4-220ENST00000532375 PPP1R21Q6ZMI0 780 aa13.75□□□□□ -0.21
TSPAN4-220ENST00000532375 SNX20Q7Z614 316 aa13.75□□□□□ -0.21
TSPAN4-220ENST00000532375 CAND1Q86VP6 1230 aaKnown RBP13.75□□□□□ -0.21
TSPAN4-220ENST00000532375 TMPRSS12Q86WS5 348 aa13.75□□□□□ -0.21
TSPAN4-220ENST00000532375 PIANPQ8IYJ0 282 aa13.75□□□□□ -0.21
TSPAN4-220ENST00000532375 ARL14Q8N4G2 192 aa13.75□□□□□ -0.21
TSPAN4-220ENST00000532375 DNAAF3Q8N9W5 541 aa13.75□□□□□ -0.21
TSPAN4-220ENST00000532375 ZDHHC1Q8WTX9 485 aa13.75□□□□□ -0.21
TSPAN4-220ENST00000532375 GATA6Q92908 595 aa13.75□□□□□ -0.21
TSPAN4-220ENST00000532375 GLMNQ92990 594 aa13.75□□□□□ -0.21
TSPAN4-220ENST00000532375 CAPZA3Q96KX2 299 aa13.75□□□□□ -0.21
TSPAN4-220ENST00000532375 FAM96AQ9H5X1 160 aa13.75□□□□□ -0.21
TSPAN4-220ENST00000532375 TBC1D29Q9UFV1 150 aa13.75□□□□□ -0.21
TSPAN4-220ENST00000532375 TCAF1Q9Y4C2 921 aa13.75□□□□□ -0.21
TSPAN4-220ENST00000532375 RNF215Q9Y6U7 377 aa13.75□□□□□ -0.21
TSPAN4-220ENST00000532375 KIF26BQ2KJY2 2108 aa13.75□□□□□ -0.21
TSPAN4-220ENST00000532375 CEP295Q9C0D2 2601 aa13.75□□□□□ -0.21
TSPAN4-220ENST00000532375 FRYQ5TBA9 3013 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms