RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 TMEM178BH3BS89 294 aa3.88□□□□□ -1.79
PTPRK-220ENST00000531466 SYNCRIPO60506 623 aaKnown RBP3.88□□□□□ -1.79
PTPRK-220ENST00000531466 ZFAND5O76080 213 aa3.88□□□□□ -1.79
PTPRK-220ENST00000531466 IRF1P10914 325 aa3.88□□□□□ -1.79
PTPRK-220ENST00000531466 TLX1P31314 330 aaPredicted RBP3.88□□□□□ -1.79
PTPRK-220ENST00000531466 RPP30P78346 268 aaKnown RBP3.88□□□□□ -1.79
PTPRK-220ENST00000531466 MORC3Q14149 939 aa3.88□□□□□ -1.79
PTPRK-220ENST00000531466 BRD3Q15059 726 aa3.88□□□□□ -1.79
PTPRK-220ENST00000531466 TAF5Q15542 800 aa3.88□□□□□ -1.79
PTPRK-220ENST00000531466 DCST1Q5T197 706 aa3.88□□□□□ -1.79
PTPRK-220ENST00000531466 PWWP2BQ6NUJ5 590 aa3.88□□□□□ -1.79
PTPRK-220ENST00000531466 DOK6Q6PKX4 331 aa3.88□□□□□ -1.79
PTPRK-220ENST00000531466 LONP2Q86WA8 852 aa3.88□□□□□ -1.79
PTPRK-220ENST00000531466 SCML4Q8N228 414 aa3.88□□□□□ -1.79
PTPRK-220ENST00000531466 APBB2Q92870 758 aa3.88□□□□□ -1.79
PTPRK-220ENST00000531466 ZNF622Q969S3 477 aaKnown RBP eCLIP3.88□□□□□ -1.79
PTPRK-220ENST00000531466 PLCXD1Q9NUJ7 323 aa3.88□□□□□ -1.79
PTPRK-220ENST00000531466 CEPT1Q9Y6K0 416 aa3.88□□□□□ -1.79
PTPRK-220ENST00000531466 FLT1P17948 1338 aa3.88□□□□□ -1.79
PTPRK-220ENST00000531466 MAGEB17A8MXT2 336 aa3.87□□□□□ -1.79
PTPRK-220ENST00000531466 HS3ST1O14792 307 aa3.87□□□□□ -1.79
PTPRK-220ENST00000531466 PI15O43692 258 aa3.87□□□□□ -1.79
PTPRK-220ENST00000531466 TSPAN3O60637 253 aa3.87□□□□□ -1.79
PTPRK-220ENST00000531466 MOCS3O95396 460 aa3.87□□□□□ -1.79
PTPRK-220ENST00000531466 NR2F2P24468 414 aa3.87□□□□□ -1.79
PTPRK-220ENST00000531466 ELF1P32519 619 aa3.87□□□□□ -1.79
PTPRK-220ENST00000531466 SNRPD1P62314 119 aaKnown RBP3.87□□□□□ -1.79
PTPRK-220ENST00000531466 RIGQ13278 110 aa3.87□□□□□ -1.79
PTPRK-220ENST00000531466 SYCP2LQ5T4T6 812 aa3.87□□□□□ -1.79
PTPRK-220ENST00000531466 PLXDC2Q6UX71 529 aa3.87□□□□□ -1.79
PTPRK-220ENST00000531466 RSRC2Q7L4I2 434 aaKnown RBP3.87□□□□□ -1.79
PTPRK-220ENST00000531466 OXNAD1Q96HP4 312 aaPredicted RBP3.87□□□□□ -1.79
PTPRK-220ENST00000531466 LBHD1Q9BQE6 289 aaPredicted RBP3.87□□□□□ -1.79
PTPRK-220ENST00000531466 REEP2Q9BRK0 252 aa3.87□□□□□ -1.79
PTPRK-220ENST00000531466 ZNF318Q5VUA4 2279 aa3.87□□□□□ -1.79
PTPRK-220ENST00000531466 MLYCDO95822 493 aa3.86□□□□□ -1.79
PTPRK-220ENST00000531466 CLPTM1O96005 669 aa3.86□□□□□ -1.79
PTPRK-220ENST00000531466 HMBSP08397 361 aa3.86□□□□□ -1.79
PTPRK-220ENST00000531466 CHKAP35790 457 aa3.86□□□□□ -1.79
PTPRK-220ENST00000531466 GPD2P43304 727 aa3.86□□□□□ -1.79
PTPRK-220ENST00000531466 SLC6A12P48065 614 aa3.86□□□□□ -1.79
PTPRK-220ENST00000531466 PPARDQ03181 441 aa3.86□□□□□ -1.79
PTPRK-220ENST00000531466 MYLK3Q32MK0 819 aa3.86□□□□□ -1.79
PTPRK-220ENST00000531466 ZNF766Q5HY98 468 aa3.86□□□□□ -1.79
PTPRK-220ENST00000531466 SLC22A25Q6T423 547 aa3.86□□□□□ -1.79
PTPRK-220ENST00000531466 CASC1Q6TDU7 716 aa3.86□□□□□ -1.79
PTPRK-220ENST00000531466 FAM43BQ6ZT52 329 aaPredicted RBP3.86□□□□□ -1.79
PTPRK-220ENST00000531466 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.86□□□□□ -1.79
PTPRK-220ENST00000531466 FAM9BQ8IZU0 186 aa3.86□□□□□ -1.79
PTPRK-220ENST00000531466 NME8Q8N427 588 aa3.86□□□□□ -1.79
PTPRK-220ENST00000531466 MYCT1Q8N699 235 aa3.86□□□□□ -1.79
PTPRK-220ENST00000531466 ZNRF4Q8WWF5 429 aa3.86□□□□□ -1.79
PTPRK-220ENST00000531466 SECISBP2LQ93073 1101 aaKnown RBP3.86□□□□□ -1.79
PTPRK-220ENST00000531466 PRAC1Q96KF2 57 aa3.86□□□□□ -1.79
PTPRK-220ENST00000531466 PRMT6Q96LA8 375 aaPredicted RBP3.86□□□□□ -1.79
PTPRK-220ENST00000531466 GLIS2Q9BZE0 524 aaPredicted RBP3.86□□□□□ -1.79
PTPRK-220ENST00000531466 ZNF71Q9NQZ8 489 aaPredicted RBP3.86□□□□□ -1.79
PTPRK-220ENST00000531466 KLHL9Q9P2J3 617 aa3.86□□□□□ -1.79
PTPRK-220ENST00000531466 DNAJB4Q9UDY4 337 aa3.86□□□□□ -1.79
PTPRK-220ENST00000531466 GOLGA6L10A0A0M3HER8 536 aa3.85□□□□□ -1.79
PTPRK-220ENST00000531466 ANKRD28O15084 1053 aa3.85□□□□□ -1.79
PTPRK-220ENST00000531466 SH3BP5O60239 455 aa3.85□□□□□ -1.79
PTPRK-220ENST00000531466 NADKO95544 446 aaPredicted RBP3.85□□□□□ -1.79
PTPRK-220ENST00000531466 EML2O95834 649 aa3.85□□□□□ -1.79
PTPRK-220ENST00000531466 HSP90AA1P07900 732 aaKnown RBP3.85□□□□□ -1.79
PTPRK-220ENST00000531466 APOBEC1P41238 236 aaKnown RBP3.85□□□□□ -1.79
PTPRK-220ENST00000531466 KCNJ10P78508 379 aa3.85□□□□□ -1.79
PTPRK-220ENST00000531466 GTDC1Q4AE62 458 aa3.85□□□□□ -1.79
PTPRK-220ENST00000531466 WDR45BQ5MNZ6 344 aa3.85□□□□□ -1.79
PTPRK-220ENST00000531466 ERC1Q8IUD2 1116 aa3.85□□□□□ -1.79
PTPRK-220ENST00000531466 LINC00612Q8N6U2 182 aa3.85□□□□□ -1.79
PTPRK-220ENST00000531466 MRGPRDQ8TDS7 321 aa3.85□□□□□ -1.79
PTPRK-220ENST00000531466 FOXN4Q96NZ1 517 aa3.85□□□□□ -1.79
PTPRK-220ENST00000531466 MPHOSPH6Q99547 160 aaKnown RBP3.85□□□□□ -1.79
PTPRK-220ENST00000531466 SLC38A7Q9NVC3 462 aa3.85□□□□□ -1.79
PTPRK-220ENST00000531466 PTTG2Q9NZH5 202 aa3.85□□□□□ -1.79
PTPRK-220ENST00000531466 A4GNTQ9UNA3 340 aa3.85□□□□□ -1.79
PTPRK-220ENST00000531466 AGRNO00468 2067 aa3.84□□□□□ -1.79
PTPRK-220ENST00000531466 IGLV7-46A0A075B6I9 117 aa3.84□□□□□ -1.79
PTPRK-220ENST00000531466 A0A0G2JNG1 304 aa3.84□□□□□ -1.79
PTPRK-220ENST00000531466 FAM90A26D6RGX4 464 aa3.84□□□□□ -1.79
PTPRK-220ENST00000531466 H0YIN7 160 aa3.84□□□□□ -1.79
PTPRK-220ENST00000531466 ITGA3P26006 1051 aa3.84□□□□□ -1.79
PTPRK-220ENST00000531466 UBA7P41226 1012 aa3.84□□□□□ -1.79
PTPRK-220ENST00000531466 CDH15P55291 814 aa3.84□□□□□ -1.79
PTPRK-220ENST00000531466 SLC12A1Q13621 1099 aa3.84□□□□□ -1.79
PTPRK-220ENST00000531466 KIR2DS5Q14953 304 aa3.84□□□□□ -1.79
PTPRK-220ENST00000531466 TRIM65Q6PJ69 517 aa3.84□□□□□ -1.79
PTPRK-220ENST00000531466 NOC3LQ8WTT2 800 aaKnown RBP3.84□□□□□ -1.79
PTPRK-220ENST00000531466 ANP32BQ92688 251 aaKnown RBP3.84□□□□□ -1.79
PTPRK-220ENST00000531466 H2AFJQ9BTM1 129 aa3.84□□□□□ -1.79
PTPRK-220ENST00000531466 FGFBP2Q9BYJ0 223 aa3.84□□□□□ -1.79
PTPRK-220ENST00000531466 VEZTQ9HBM0 779 aa3.84□□□□□ -1.79
PTPRK-220ENST00000531466 KLK13Q9UKR3 277 aa3.84□□□□□ -1.79
PTPRK-220ENST00000531466 TEX13CA0A0J9YWL9 993 aa3.83□□□□□ -1.8
PTPRK-220ENST00000531466 A0A1W2PP11 408 aa3.83□□□□□ -1.8
PTPRK-220ENST00000531466 TTC36A6NLP5 189 aa3.83□□□□□ -1.8
PTPRK-220ENST00000531466 PRR32B1ATL7 298 aa3.83□□□□□ -1.8
PTPRK-220ENST00000531466 TAF4O00268 1085 aa3.83□□□□□ -1.8
PTPRK-220ENST00000531466 RTL8CO15255 209 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 147.4 ms