RNA–Protein interactions for RNA: ENST00000530309.1

CASP4-208, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-208ENST00000530309 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.87□□□□□ -1.47
CASP4-208ENST00000530309 CACNA1IQ9P0X4 2223 aa5.86□□□□□ -1.47
CASP4-208ENST00000530309 LOC100509620A0A075B734 347 aa5.86□□□□□ -1.47
CASP4-208ENST00000530309 LNP1A1A4G5 178 aa5.86□□□□□ -1.47
CASP4-208ENST00000530309 P4HA2O15460 535 aa5.86□□□□□ -1.47
CASP4-208ENST00000530309 AVILO75366 819 aa5.86□□□□□ -1.47
CASP4-208ENST00000530309 GH2P01242 217 aa5.86□□□□□ -1.47
CASP4-208ENST00000530309 ADRB2P07550 413 aa5.86□□□□□ -1.47
CASP4-208ENST00000530309 LINC00271P0C7V0 271 aa5.86□□□□□ -1.47
CASP4-208ENST00000530309 TRIM21P19474 475 aaKnown RBP5.86□□□□□ -1.47
CASP4-208ENST00000530309 S1PR1P21453 382 aa5.86□□□□□ -1.47
CASP4-208ENST00000530309 LMAN1P49257 510 aa5.86□□□□□ -1.47
CASP4-208ENST00000530309 THBS3P49746 956 aa5.86□□□□□ -1.47
CASP4-208ENST00000530309 FOXG1P55316 489 aaPredicted RBP5.86□□□□□ -1.47
CASP4-208ENST00000530309 NANOS2P60321 138 aaKnown RBP5.86□□□□□ -1.47
CASP4-208ENST00000530309 CXCL9Q07325 125 aa5.86□□□□□ -1.47
CASP4-208ENST00000530309 MVPQ14764 893 aaKnown RBP5.86□□□□□ -1.47
CASP4-208ENST00000530309 SYT16Q17RD7 645 aa5.86□□□□□ -1.47
CASP4-208ENST00000530309 C15orf59Q2T9L4 293 aaPredicted RBP5.86□□□□□ -1.47
CASP4-208ENST00000530309 GARNL3Q5VVW2 1013 aa5.86□□□□□ -1.47
CASP4-208ENST00000530309 TMCO3Q6UWJ1 677 aa5.86□□□□□ -1.47
CASP4-208ENST00000530309 TPRG1Q6ZUI0 275 aa5.86□□□□□ -1.47
CASP4-208ENST00000530309 CREB3L2Q70SY1 520 aa5.86□□□□□ -1.47
CASP4-208ENST00000530309 DNAAF5Q86Y56 855 aa5.86□□□□□ -1.47
CASP4-208ENST00000530309 EMC1Q8N766 993 aa5.86□□□□□ -1.47
CASP4-208ENST00000530309 ACVR1CQ8NER5 493 aa5.86□□□□□ -1.47
CASP4-208ENST00000530309 OR5R1Q8NH85 324 aa5.86□□□□□ -1.47
CASP4-208ENST00000530309 SPATA22Q8NHS9 363 aa5.86□□□□□ -1.47
CASP4-208ENST00000530309 QRFPRQ96P65 431 aa5.86□□□□□ -1.47
CASP4-208ENST00000530309 PCYT2Q99447 389 aa5.86□□□□□ -1.47
CASP4-208ENST00000530309 SEMA3CQ99985 751 aa5.86□□□□□ -1.47
CASP4-208ENST00000530309 TM6SF1Q9BZW5 370 aa5.86□□□□□ -1.47
CASP4-208ENST00000530309 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.86□□□□□ -1.47
CASP4-208ENST00000530309 TRMT1Q9NXH9 659 aaKnown RBP5.86□□□□□ -1.47
CASP4-208ENST00000530309 AMDHD2Q9Y303 409 aa5.86□□□□□ -1.47
CASP4-208ENST00000530309 PTPRCP08575 1304 aa5.85□□□□□ -1.47
CASP4-208ENST00000530309 LACTBL1A8MY62 500 aa5.85□□□□□ -1.47
CASP4-208ENST00000530309 ADAM20O43506 726 aa5.85□□□□□ -1.47
CASP4-208ENST00000530309 PLOD3O60568 738 aa5.85□□□□□ -1.47
CASP4-208ENST00000530309 RSL1D1O76021 490 aaKnown RBP5.85□□□□□ -1.47
CASP4-208ENST00000530309 PMS2P2O95744 297 aa5.85□□□□□ -1.47
CASP4-208ENST00000530309 PRLRP16471 622 aa5.85□□□□□ -1.47
CASP4-208ENST00000530309 IL11P20809 199 aa5.85□□□□□ -1.47
CASP4-208ENST00000530309 HRH2P25021 359 aa5.85□□□□□ -1.47
CASP4-208ENST00000530309 CORO1AP31146 461 aaKnown RBP5.85□□□□□ -1.47
CASP4-208ENST00000530309 KRT20P35900 424 aa5.85□□□□□ -1.47
CASP4-208ENST00000530309 TMPOP42166 694 aaKnown RBP5.85□□□□□ -1.47
CASP4-208ENST00000530309 PDLIM4P50479 330 aa5.85□□□□□ -1.47
CASP4-208ENST00000530309 DSCR9P59020 149 aa5.85□□□□□ -1.47
CASP4-208ENST00000530309 CALD1Q05682 793 aaKnown RBP5.85□□□□□ -1.47
CASP4-208ENST00000530309 DLG1Q12959 904 aa5.85□□□□□ -1.47
CASP4-208ENST00000530309 KRTCAP3Q53RY4 240 aa5.85□□□□□ -1.47
CASP4-208ENST00000530309 BMP2KLQ5H9B9 411 aa5.85□□□□□ -1.47
CASP4-208ENST00000530309 CEP97Q8IW35 865 aa5.85□□□□□ -1.47
CASP4-208ENST00000530309 SAMD14Q8IZD0 417 aaPredicted RBP5.85□□□□□ -1.47
CASP4-208ENST00000530309 RNF113BQ8IZP6 322 aaKnown RBP5.85□□□□□ -1.47
CASP4-208ENST00000530309 SMRP1Q8NCR6 262 aa5.85□□□□□ -1.47
CASP4-208ENST00000530309 APPL2Q8NEU8 664 aa5.85□□□□□ -1.47
CASP4-208ENST00000530309 UTP15Q8TED0 518 aaKnown RBP5.85□□□□□ -1.47
CASP4-208ENST00000530309 DUSP19Q8WTR2 217 aa5.85□□□□□ -1.47
CASP4-208ENST00000530309 ZNF385AQ96PM9 386 aaKnown RBP5.85□□□□□ -1.47
CASP4-208ENST00000530309 SMC6Q96SB8 1091 aa5.85□□□□□ -1.47
CASP4-208ENST00000530309 WACQ9BTA9 647 aa5.85□□□□□ -1.47
CASP4-208ENST00000530309 MRPL1Q9BYD6 325 aaKnown RBP5.85□□□□□ -1.47
CASP4-208ENST00000530309 RAD21L1Q9H4I0 556 aa5.85□□□□□ -1.47
CASP4-208ENST00000530309 MAGED1Q9Y5V3 778 aaPredicted RBP5.85□□□□□ -1.47
CASP4-208ENST00000530309 PDS5AQ29RF7 1337 aaKnown RBP5.84□□□□□ -1.47
CASP4-208ENST00000530309 SYNDIG1LA6NDD5 238 aa5.84□□□□□ -1.47
CASP4-208ENST00000530309 CSPG5O95196 566 aa5.84□□□□□ -1.47
CASP4-208ENST00000530309 DAOP14920 347 aa5.84□□□□□ -1.47
CASP4-208ENST00000530309 TMF1P82094 1093 aa5.84□□□□□ -1.47
CASP4-208ENST00000530309 KIF5AQ12840 1032 aa5.84□□□□□ -1.47
CASP4-208ENST00000530309 BAATQ14032 418 aaPredicted RBP5.84□□□□□ -1.47
CASP4-208ENST00000530309 SF3B4Q15427 424 aaKnown RBP eCLIP5.84□□□□□ -1.47
CASP4-208ENST00000530309 IGSF11Q5DX21 431 aa5.84□□□□□ -1.47
CASP4-208ENST00000530309 NAA16Q6N069 864 aaPredicted RBP5.84□□□□□ -1.47
CASP4-208ENST00000530309 TRNP1Q6NT89 227 aa5.84□□□□□ -1.47
CASP4-208ENST00000530309 KRT74Q7RTS7 529 aa5.84□□□□□ -1.47
CASP4-208ENST00000530309 ATG9AQ7Z3C6 839 aa5.84□□□□□ -1.47
CASP4-208ENST00000530309 PM20D2Q8IYS1 436 aa5.84□□□□□ -1.47
CASP4-208ENST00000530309 C1orf87Q8N0U7 546 aa5.84□□□□□ -1.47
CASP4-208ENST00000530309 MINDY1Q8N5J2 469 aa5.84□□□□□ -1.47
CASP4-208ENST00000530309 SYT2Q8N9I0 419 aaPredicted RBP5.84□□□□□ -1.47
CASP4-208ENST00000530309 ABTB1Q969K4 478 aaPredicted RBP5.84□□□□□ -1.47
CASP4-208ENST00000530309 PIGTQ969N2 578 aa5.84□□□□□ -1.47
CASP4-208ENST00000530309 RTP4Q96DX8 246 aa5.84□□□□□ -1.47
CASP4-208ENST00000530309 TMEM19Q96HH6 336 aa5.84□□□□□ -1.47
CASP4-208ENST00000530309 MED30Q96HR3 178 aa5.84□□□□□ -1.47
CASP4-208ENST00000530309 GCNAQ96QF7 691 aa5.84□□□□□ -1.47
CASP4-208ENST00000530309 ABHD1Q96SE0 405 aa5.84□□□□□ -1.47
CASP4-208ENST00000530309 DDOQ99489 341 aa5.84□□□□□ -1.47
CASP4-208ENST00000530309 GFI1Q99684 422 aa5.84□□□□□ -1.47
CASP4-208ENST00000530309 RTN4RQ9BZR6 473 aa5.84□□□□□ -1.47
CASP4-208ENST00000530309 GAREM1Q9H706 876 aa5.84□□□□□ -1.47
CASP4-208ENST00000530309 TMEM30AQ9NV96 361 aa5.84□□□□□ -1.47
CASP4-208ENST00000530309 MARCH4Q9P2E8 410 aaPredicted RBP5.84□□□□□ -1.47
CASP4-208ENST00000530309 CPSF2Q9P2I0 782 aaKnown RBP5.84□□□□□ -1.47
CASP4-208ENST00000530309 TSPYL4Q9UJ04 414 aa5.84□□□□□ -1.47
CASP4-208ENST00000530309 TNFRSF18Q9Y5U5 241 aa5.84□□□□□ -1.47
CASP4-208ENST00000530309 ZNF217O75362 1048 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms