RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 PRAMEF12O95522 483 aa14.63□□□□□ -0.07
ECHDC1-220ENST00000528402 CHEK2O96017 543 aa14.63□□□□□ -0.07
ECHDC1-220ENST00000528402 S100BP04271 92 aaPredicted RBP14.63□□□□□ -0.07
ECHDC1-220ENST00000528402 SRPRAP08240 638 aaKnown RBP14.63□□□□□ -0.07
ECHDC1-220ENST00000528402 CBSLP0DN79 551 aa14.63□□□□□ -0.07
ECHDC1-220ENST00000528402 GNAZP19086 355 aa14.63□□□□□ -0.07
ECHDC1-220ENST00000528402 CBSP35520 551 aa14.63□□□□□ -0.07
ECHDC1-220ENST00000528402 NSG1P42857 185 aa14.63□□□□□ -0.07
ECHDC1-220ENST00000528402 ACADVLP49748 655 aa14.63□□□□□ -0.07
ECHDC1-220ENST00000528402 SLC25A3Q00325 362 aa14.63□□□□□ -0.07
ECHDC1-220ENST00000528402 TSNQ15631 228 aaKnown RBP14.63□□□□□ -0.07
ECHDC1-220ENST00000528402 TTLL9Q3SXZ7 439 aa14.63□□□□□ -0.07
ECHDC1-220ENST00000528402 UGT3A2Q3SY77 523 aa14.63□□□□□ -0.07
ECHDC1-220ENST00000528402 KHDC1Q4VXA5 237 aaKnown RBP14.63□□□□□ -0.07
ECHDC1-220ENST00000528402 ACSBG2Q5FVE4 666 aa14.63□□□□□ -0.07
ECHDC1-220ENST00000528402 KANK2Q63ZY3 851 aa14.63□□□□□ -0.07
ECHDC1-220ENST00000528402 TTC23LQ6PF05 361 aa14.63□□□□□ -0.07
ECHDC1-220ENST00000528402 CRTC1Q6UUV9 634 aa14.63□□□□□ -0.07
ECHDC1-220ENST00000528402 FAM151BQ6UXP7 276 aa14.63□□□□□ -0.07
ECHDC1-220ENST00000528402 GDPD4Q6W3E5 623 aa14.63□□□□□ -0.07
ECHDC1-220ENST00000528402 POU5F2Q8N7G0 328 aa14.63□□□□□ -0.07
ECHDC1-220ENST00000528402 SIDT2Q8NBJ9 832 aaKnown RBP14.63□□□□□ -0.07
ECHDC1-220ENST00000528402 OR56A4Q8NGH8 313 aa14.63□□□□□ -0.07
ECHDC1-220ENST00000528402 OR6K2Q8NGY2 324 aa14.63□□□□□ -0.07
ECHDC1-220ENST00000528402 EEF1AKMT1Q8WVE0 214 aa14.63□□□□□ -0.07
ECHDC1-220ENST00000528402 RPL10LQ96L21 214 aaKnown RBP14.63□□□□□ -0.07
ECHDC1-220ENST00000528402 HEPHQ9BQS7 1158 aa14.63□□□□□ -0.07
ECHDC1-220ENST00000528402 C17orf80Q9BSJ5 609 aa14.63□□□□□ -0.07
ECHDC1-220ENST00000528402 OSBPL1AQ9BXW6 950 aa14.63□□□□□ -0.07
ECHDC1-220ENST00000528402 MID1IP1Q9NPA3 183 aa14.63□□□□□ -0.07
ECHDC1-220ENST00000528402 STX18Q9P2W9 335 aaKnown RBP14.63□□□□□ -0.07
ECHDC1-220ENST00000528402 SLC7A8Q9UHI5 535 aa14.63□□□□□ -0.07
ECHDC1-220ENST00000528402 ERVW-1Q9UQF0 538 aa14.63□□□□□ -0.07
ECHDC1-220ENST00000528402 L3MBTL1Q9Y468 752 aa14.63□□□□□ -0.07
ECHDC1-220ENST00000528402 COPG1Q9Y678 874 aaKnown RBP14.63□□□□□ -0.07
ECHDC1-220ENST00000528402 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.63□□□□□ -0.07
ECHDC1-220ENST00000528402 SCN8AQ9UQD0 1980 aa14.63□□□□□ -0.07
ECHDC1-220ENST00000528402 NOTCH4Q99466 2003 aa14.62□□□□□ -0.07
ECHDC1-220ENST00000528402 CDC7O00311 574 aa14.62□□□□□ -0.07
ECHDC1-220ENST00000528402 NRG2O14511 850 aaPredicted RBP14.62□□□□□ -0.07
ECHDC1-220ENST00000528402 GAPDHSO14556 408 aaPredicted RBP14.62□□□□□ -0.07
ECHDC1-220ENST00000528402 UBFD1O14562 309 aaKnown RBP14.62□□□□□ -0.07
ECHDC1-220ENST00000528402 RAD51BO15315 384 aa14.62□□□□□ -0.07
ECHDC1-220ENST00000528402 EPCAMP16422 314 aa14.62□□□□□ -0.07
ECHDC1-220ENST00000528402 GM2AP17900 193 aa14.62□□□□□ -0.07
ECHDC1-220ENST00000528402 ITGAXP20702 1163 aa14.62□□□□□ -0.07
ECHDC1-220ENST00000528402 EEF1DP29692 281 aaKnown RBP14.62□□□□□ -0.07
ECHDC1-220ENST00000528402 CTSOP43234 321 aaPredicted RBP14.62□□□□□ -0.07
ECHDC1-220ENST00000528402 PKNOX1P55347 436 aa14.62□□□□□ -0.07
ECHDC1-220ENST00000528402 SH3BP2P78314 561 aa14.62□□□□□ -0.07
ECHDC1-220ENST00000528402 GRIK2Q13002 908 aa14.62□□□□□ -0.07
ECHDC1-220ENST00000528402 CCDC6Q16204 474 aa14.62□□□□□ -0.07
ECHDC1-220ENST00000528402 CDKL4Q5MAI5 379 aa14.62□□□□□ -0.07
ECHDC1-220ENST00000528402 LY6G5CQ5SRR4 150 aa14.62□□□□□ -0.07
ECHDC1-220ENST00000528402 C1orf146Q5VVC0 180 aa14.62□□□□□ -0.07
ECHDC1-220ENST00000528402 DPY19L3Q6ZPD9 716 aa14.62□□□□□ -0.07
ECHDC1-220ENST00000528402 LARP4Q71RC2 724 aaKnown RBP eCLIP14.62□□□□□ -0.07
ECHDC1-220ENST00000528402 ADIPOR2Q86V24 386 aa14.62□□□□□ -0.07
ECHDC1-220ENST00000528402 RAVER1Q8IY67 606 aaKnown RBP14.62□□□□□ -0.07
ECHDC1-220ENST00000528402 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.62□□□□□ -0.07
ECHDC1-220ENST00000528402 DEFB107AQ8IZN7 70 aa14.62□□□□□ -0.07
ECHDC1-220ENST00000528402 MYO1HQ8N1T3 1032 aa14.62□□□□□ -0.07
ECHDC1-220ENST00000528402 NXPE1Q8N323 547 aa14.62□□□□□ -0.07
ECHDC1-220ENST00000528402 FBXW8Q8N3Y1 598 aa14.62□□□□□ -0.07
ECHDC1-220ENST00000528402 FBXO27Q8NI29 283 aa14.62□□□□□ -0.07
ECHDC1-220ENST00000528402 ZNF483Q8TF39 744 aaPredicted RBP14.62□□□□□ -0.07
ECHDC1-220ENST00000528402 EXT2Q93063 718 aa14.62□□□□□ -0.07
ECHDC1-220ENST00000528402 C19orf60Q96EN9 201 aa14.62□□□□□ -0.07
ECHDC1-220ENST00000528402 CATSPER2Q96P56 530 aa14.62□□□□□ -0.07
ECHDC1-220ENST00000528402 LBHD1Q9BQE6 289 aaPredicted RBP14.62□□□□□ -0.07
ECHDC1-220ENST00000528402 CIPCQ9C0C6 399 aa14.62□□□□□ -0.07
ECHDC1-220ENST00000528402 ACSS2Q9NR19 701 aa14.62□□□□□ -0.07
ECHDC1-220ENST00000528402 SPATS2LQ9NUQ6 558 aaKnown RBP14.62□□□□□ -0.07
ECHDC1-220ENST00000528402 TMEM45AQ9NWC5 275 aa14.62□□□□□ -0.07
ECHDC1-220ENST00000528402 ZDHHC3Q9NYG2 299 aa14.62□□□□□ -0.07
ECHDC1-220ENST00000528402 PKD2L2Q9NZM6 624 aa14.62□□□□□ -0.07
ECHDC1-220ENST00000528402 ANGPTL2Q9UKU9 493 aa14.62□□□□□ -0.07
ECHDC1-220ENST00000528402 MRPS23Q9Y3D9 190 aaKnown RBP14.62□□□□□ -0.07
ECHDC1-220ENST00000528402 ALPK3Q96L96 1907 aa14.61□□□□□ -0.07
ECHDC1-220ENST00000528402 MYOFQ9NZM1 2061 aa14.61□□□□□ -0.07
ECHDC1-220ENST00000528402 SKAP2O75563 359 aaPredicted RBP14.61□□□□□ -0.07
ECHDC1-220ENST00000528402 CRCPO75575 148 aa14.61□□□□□ -0.07
ECHDC1-220ENST00000528402 UROSP10746 265 aa14.61□□□□□ -0.07
ECHDC1-220ENST00000528402 STK19P49842 368 aaPredicted RBP14.61□□□□□ -0.07
ECHDC1-220ENST00000528402 STX1BP61266 288 aa14.61□□□□□ -0.07
ECHDC1-220ENST00000528402 AP2B1P63010 937 aa14.61□□□□□ -0.07
ECHDC1-220ENST00000528402 SLC34A1Q06495 639 aa14.61□□□□□ -0.07
ECHDC1-220ENST00000528402 TBL3Q12788 808 aaKnown RBP14.61□□□□□ -0.07
ECHDC1-220ENST00000528402 ART3Q13508 389 aa14.61□□□□□ -0.07
ECHDC1-220ENST00000528402 CAMK1Q14012 370 aa14.61□□□□□ -0.07
ECHDC1-220ENST00000528402 E2F5Q15329 346 aa14.61□□□□□ -0.07
ECHDC1-220ENST00000528402 PCBP2Q15366 365 aaKnown RBP eCLIP14.61□□□□□ -0.07
ECHDC1-220ENST00000528402 CHRNA6Q15825 494 aa14.61□□□□□ -0.07
ECHDC1-220ENST00000528402 SLC5A9Q2M3M2 681 aa14.61□□□□□ -0.07
ECHDC1-220ENST00000528402 ASTLQ6HA08 431 aaPredicted RBP14.61□□□□□ -0.07
ECHDC1-220ENST00000528402 FRA10AC1Q70Z53 315 aa14.61□□□□□ -0.07
ECHDC1-220ENST00000528402 GRASPQ7Z6J2 395 aaPredicted RBP14.61□□□□□ -0.07
ECHDC1-220ENST00000528402 SNX32Q86XE0 403 aa14.61□□□□□ -0.07
ECHDC1-220ENST00000528402 CPNE9Q8IYJ1 553 aa14.61□□□□□ -0.07
ECHDC1-220ENST00000528402 C7orf61Q8IZ16 206 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms