RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 CRTC3Q6UUV7 619 aa22.1■■□□□ 1.13
TRAPPC4-208ENST00000527680 NPNTQ6UXI9 565 aa22.1■■□□□ 1.13
TRAPPC4-208ENST00000527680 B4GALNT4Q76KP1 1039 aa22.1■■□□□ 1.13
TRAPPC4-208ENST00000527680 PLXDC1Q8IUK5 500 aa22.1■■□□□ 1.13
TRAPPC4-208ENST00000527680 TRIM48Q8IWZ4 208 aa22.1■■□□□ 1.13
TRAPPC4-208ENST00000527680 NLGN4XQ8N0W4 816 aa22.1■■□□□ 1.13
TRAPPC4-208ENST00000527680 BMPERQ8N8U9 685 aa22.1■■□□□ 1.13
TRAPPC4-208ENST00000527680 NLGN4YQ8NFZ3 816 aaPredicted RBP22.1■■□□□ 1.13
TRAPPC4-208ENST00000527680 RTP4Q96DX8 246 aa22.1■■□□□ 1.13
TRAPPC4-208ENST00000527680 CCDC42Q96M95 316 aa22.1■■□□□ 1.13
TRAPPC4-208ENST00000527680 SLC25A51Q9H1U9 297 aa22.1■■□□□ 1.13
TRAPPC4-208ENST00000527680 GPN2Q9H9Y4 310 aaPredicted RBP22.1■■□□□ 1.13
TRAPPC4-208ENST00000527680 GEMIN8Q9NWZ8 242 aaKnown RBP22.1■■□□□ 1.13
TRAPPC4-208ENST00000527680 PILRAQ9UKJ1 303 aa22.1■■□□□ 1.13
TRAPPC4-208ENST00000527680 SSU72P8A0A1W2PR75 194 aa22.09■■□□□ 1.13
TRAPPC4-208ENST00000527680 CBFA2T2O43439 604 aa22.09■■□□□ 1.13
TRAPPC4-208ENST00000527680 VIPP01282 170 aa22.09■■□□□ 1.13
TRAPPC4-208ENST00000527680 AMD1P17707 334 aa22.09■■□□□ 1.13
TRAPPC4-208ENST00000527680 MAP4P27816 1152 aaKnown RBP22.09■■□□□ 1.13
TRAPPC4-208ENST00000527680 TRIM14Q14142 442 aa22.09■■□□□ 1.13
TRAPPC4-208ENST00000527680 ASTE1Q2TB18 679 aaPredicted RBP22.09■■□□□ 1.13
TRAPPC4-208ENST00000527680 PLA2G4EQ3MJ16 856 aa22.09■■□□□ 1.13
TRAPPC4-208ENST00000527680 SLC9A4Q6AI14 798 aa22.09■■□□□ 1.13
TRAPPC4-208ENST00000527680 TMC3Q7Z5M5 1100 aa22.09■■□□□ 1.13
TRAPPC4-208ENST00000527680 ADGRG6Q86SQ4 1221 aa22.09■■□□□ 1.13
TRAPPC4-208ENST00000527680 TRAM1L1Q8N609 369 aa22.09■■□□□ 1.13
TRAPPC4-208ENST00000527680 GLYATL1Q969I3 302 aa22.09■■□□□ 1.13
TRAPPC4-208ENST00000527680 PLEKHG4BQ96PX9 1271 aa22.09■■□□□ 1.13
TRAPPC4-208ENST00000527680 ZPBPQ9BS86 351 aa22.09■■□□□ 1.13
TRAPPC4-208ENST00000527680 SLC25A18Q9H1K4 315 aa22.09■■□□□ 1.13
TRAPPC4-208ENST00000527680 EPB41L1Q9H4G0 881 aa22.09■■□□□ 1.13
TRAPPC4-208ENST00000527680 FBXO8Q9NRD0 319 aa22.09■■□□□ 1.13
TRAPPC4-208ENST00000527680 DNAJC16Q9Y2G8 782 aa22.09■■□□□ 1.13
TRAPPC4-208ENST00000527680 ZNF711Q9Y462 761 aa22.09■■□□□ 1.13
TRAPPC4-208ENST00000527680 A6NCN8 305 aa22.08■■□□□ 1.13
TRAPPC4-208ENST00000527680 ZNF891A8MT65 544 aaPredicted RBP22.08■■□□□ 1.13
TRAPPC4-208ENST00000527680 PDZK1P1A8MUH7 402 aa22.08■■□□□ 1.13
TRAPPC4-208ENST00000527680 ZNF487B1APH4 448 aa22.08■■□□□ 1.13
TRAPPC4-208ENST00000527680 POLR1CO15160 346 aaPredicted RBP22.08■■□□□ 1.13
TRAPPC4-208ENST00000527680 KMOO15229 486 aa22.08■■□□□ 1.13
TRAPPC4-208ENST00000527680 CAPN5O15484 640 aaPredicted RBP22.08■■□□□ 1.13
TRAPPC4-208ENST00000527680 PMPCBO75439 489 aa22.08■■□□□ 1.13
TRAPPC4-208ENST00000527680 MT-CYBP00156 380 aaPredicted RBP22.08■■□□□ 1.13
TRAPPC4-208ENST00000527680 CLCNKAP51800 687 aa22.08■■□□□ 1.13
TRAPPC4-208ENST00000527680 RHOT2Q8IXI1 618 aa22.08■■□□□ 1.13
TRAPPC4-208ENST00000527680 SPATA22Q8NHS9 363 aa22.08■■□□□ 1.13
TRAPPC4-208ENST00000527680 TRIB3Q96RU7 358 aa22.08■■□□□ 1.13
TRAPPC4-208ENST00000527680 DNAJC7Q99615 494 aa22.08■■□□□ 1.13
TRAPPC4-208ENST00000527680 CHP1Q99653 195 aa22.08■■□□□ 1.13
TRAPPC4-208ENST00000527680 BRD8Q9H0E9 1235 aa22.08■■□□□ 1.13
TRAPPC4-208ENST00000527680 SPTLC3Q9NUV7 552 aa22.08■■□□□ 1.13
TRAPPC4-208ENST00000527680 IL17BQ9UHF5 180 aa22.08■■□□□ 1.13
TRAPPC4-208ENST00000527680 C3orf70A6NLC5 250 aaPredicted RBP22.07■■□□□ 1.12
TRAPPC4-208ENST00000527680 GPR89AB7ZAQ6 455 aa22.07■■□□□ 1.12
TRAPPC4-208ENST00000527680 MTX2O75431 263 aa22.07■■□□□ 1.12
TRAPPC4-208ENST00000527680 CDK14O94921 469 aa22.07■■□□□ 1.12
TRAPPC4-208ENST00000527680 GPR89BP0CG08 455 aa22.07■■□□□ 1.12
TRAPPC4-208ENST00000527680 ZNF7P17097 686 aaPredicted RBP22.07■■□□□ 1.12
TRAPPC4-208ENST00000527680 TYRP1P17643 537 aa22.07■■□□□ 1.12
TRAPPC4-208ENST00000527680 CCR10P46092 362 aa22.07■■□□□ 1.12
TRAPPC4-208ENST00000527680 DCDC1P59894 354 aa22.07■■□□□ 1.12
TRAPPC4-208ENST00000527680 FOXM1Q08050 763 aa22.07■■□□□ 1.12
TRAPPC4-208ENST00000527680 SEPT7Q16181 437 aaKnown RBP22.07■■□□□ 1.12
TRAPPC4-208ENST00000527680 TEX44Q53QW1 395 aa22.07■■□□□ 1.12
TRAPPC4-208ENST00000527680 PDPK2PQ6A1A2 396 aa22.07■■□□□ 1.12
TRAPPC4-208ENST00000527680 LRRTM4Q86VH4 590 aa22.07■■□□□ 1.12
TRAPPC4-208ENST00000527680 VSIG1Q86XK7 387 aa22.07■■□□□ 1.12
TRAPPC4-208ENST00000527680 GDAP1Q8TB36 358 aa22.07■■□□□ 1.12
TRAPPC4-208ENST00000527680 SRPK1Q96SB4 655 aaKnown RBP22.07■■□□□ 1.12
TRAPPC4-208ENST00000527680 EFHD1Q9BUP0 239 aa22.07■■□□□ 1.12
TRAPPC4-208ENST00000527680 NHEJ1Q9H9Q4 299 aaPredicted RBP22.07■■□□□ 1.12
TRAPPC4-208ENST00000527680 GLOD4Q9HC38 313 aa22.07■■□□□ 1.12
TRAPPC4-208ENST00000527680 APMAPQ9HDC9 416 aa22.07■■□□□ 1.12
TRAPPC4-208ENST00000527680 BPIFA1Q9NP55 256 aa22.07■■□□□ 1.12
TRAPPC4-208ENST00000527680 DDX56Q9NY93 547 aaKnown RBP22.07■■□□□ 1.12
TRAPPC4-208ENST00000527680 UBP1Q9NZI7 540 aa22.07■■□□□ 1.12
TRAPPC4-208ENST00000527680 SLC23A2Q9UGH3 650 aa22.07■■□□□ 1.12
TRAPPC4-208ENST00000527680 TENM4Q6N022 2769 aa22.07■■□□□ 1.12
TRAPPC4-208ENST00000527680 A0A0A6YYK5 440 aaPredicted RBP22.06■■□□□ 1.12
TRAPPC4-208ENST00000527680 NKX2-8O15522 239 aa22.06■■□□□ 1.12
TRAPPC4-208ENST00000527680 SUV39H1O43463 412 aa22.06■■□□□ 1.12
TRAPPC4-208ENST00000527680 NDST3O95803 873 aa22.06■■□□□ 1.12
TRAPPC4-208ENST00000527680 BPIP17213 487 aa22.06■■□□□ 1.12
TRAPPC4-208ENST00000527680 XRCC1P18887 633 aaPredicted RBP22.06■■□□□ 1.12
TRAPPC4-208ENST00000527680 TNNT3P45378 269 aaPredicted RBP22.06■■□□□ 1.12
TRAPPC4-208ENST00000527680 CSRP3P50461 194 aa22.06■■□□□ 1.12
TRAPPC4-208ENST00000527680 TMEM26Q6ZUK4 368 aa22.06■■□□□ 1.12
TRAPPC4-208ENST00000527680 BZW1Q7L1Q6 419 aaKnown RBP22.06■■□□□ 1.12
TRAPPC4-208ENST00000527680 RHOT1Q8IXI2 618 aa22.06■■□□□ 1.12
TRAPPC4-208ENST00000527680 UNC5BQ8IZJ1 945 aa22.06■■□□□ 1.12
TRAPPC4-208ENST00000527680 CATSPER2Q96P56 530 aa22.06■■□□□ 1.12
TRAPPC4-208ENST00000527680 ADNPQ9H2P0 1102 aa22.06■■□□□ 1.12
TRAPPC4-208ENST00000527680 TRIT1Q9H3H1 467 aaKnown RBP22.06■■□□□ 1.12
TRAPPC4-208ENST00000527680 SCHIP1Q9P0W5 487 aaPredicted RBP22.06■■□□□ 1.12
TRAPPC4-208ENST00000527680 HYOU1Q9Y4L1 999 aa22.06■■□□□ 1.12
TRAPPC4-208ENST00000527680 ADGRG1Q9Y653 693 aa22.06■■□□□ 1.12
TRAPPC4-208ENST00000527680 LILRA5A6NI73 299 aa22.05■■□□□ 1.12
TRAPPC4-208ENST00000527680 CHUKO15111 745 aa22.05■■□□□ 1.12
TRAPPC4-208ENST00000527680 VEGFDO43915 354 aa22.05■■□□□ 1.12
TRAPPC4-208ENST00000527680 STK17BO94768 372 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms