RNA–Protein interactions for RNA: ENST00000527624.1

PCDHA6-202, Transcript of protocadherin alpha 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHA6, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6-202ENST00000527624 Q6ZVU0 165 aa17.15■□□□□ 0.34
PCDHA6-202ENST00000527624 RAB44Q7Z6P3 723 aaPredicted RBP17.15■□□□□ 0.34
PCDHA6-202ENST00000527624 KBTBD2Q8IY47 623 aa17.15■□□□□ 0.34
PCDHA6-202ENST00000527624 NKAPQ8N5F7 415 aaKnown RBP17.15■□□□□ 0.34
PCDHA6-202ENST00000527624 KCNJ9Q92806 393 aa17.15■□□□□ 0.34
PCDHA6-202ENST00000527624 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.15■□□□□ 0.34
PCDHA6-202ENST00000527624 FUBP1Q96AE4 644 aaKnown RBP17.15■□□□□ 0.34
PCDHA6-202ENST00000527624 TTC1Q99614 292 aa17.15■□□□□ 0.34
PCDHA6-202ENST00000527624 ZNF184Q99676 751 aaPredicted RBP17.15■□□□□ 0.34
PCDHA6-202ENST00000527624 TRMOQ9BU70 441 aa17.15■□□□□ 0.34
PCDHA6-202ENST00000527624 CCDC28BQ9BUN5 200 aa17.15■□□□□ 0.34
PCDHA6-202ENST00000527624 P2RY12Q9H244 342 aa17.15■□□□□ 0.34
PCDHA6-202ENST00000527624 PPM1HQ9ULR3 514 aa17.15■□□□□ 0.34
PCDHA6-202ENST00000527624 TRAF6Q9Y4K3 522 aa17.15■□□□□ 0.34
PCDHA6-202ENST00000527624 ALPK3Q96L96 1907 aa17.14■□□□□ 0.34
PCDHA6-202ENST00000527624 HELZP42694 1942 aaKnown RBP17.14■□□□□ 0.33
PCDHA6-202ENST00000527624 PRMT5O14744 637 aaPredicted RBP17.14■□□□□ 0.33
PCDHA6-202ENST00000527624 ITGB6P18564 788 aa17.14■□□□□ 0.33
PCDHA6-202ENST00000527624 WEE1P30291 646 aa17.14■□□□□ 0.33
PCDHA6-202ENST00000527624 ECT2LQ008S8 904 aa17.14■□□□□ 0.33
PCDHA6-202ENST00000527624 NFATC2Q13469 925 aa17.14■□□□□ 0.33
PCDHA6-202ENST00000527624 IRGCQ6NXR0 463 aa17.14■□□□□ 0.33
PCDHA6-202ENST00000527624 DEFB107AQ8IZN7 70 aa17.14■□□□□ 0.33
PCDHA6-202ENST00000527624 STK40Q8N2I9 435 aa17.14■□□□□ 0.33
PCDHA6-202ENST00000527624 FBXO39Q8N4B4 442 aa17.14■□□□□ 0.33
PCDHA6-202ENST00000527624 AFAP1L2Q8N4X5 818 aa17.14■□□□□ 0.33
PCDHA6-202ENST00000527624 CHST14Q8NCH0 376 aa17.14■□□□□ 0.33
PCDHA6-202ENST00000527624 NDE1Q9NXR1 346 aa17.14■□□□□ 0.33
PCDHA6-202ENST00000527624 RWDD3Q9Y3V2 267 aa17.14■□□□□ 0.33
PCDHA6-202ENST00000527624 MTCL1Q9Y4B5 1905 aaKnown RBP17.14■□□□□ 0.33
PCDHA6-202ENST00000527624 UGT2B4P06133 528 aa17.13■□□□□ 0.33
PCDHA6-202ENST00000527624 HOXA9P31269 272 aa17.13■□□□□ 0.33
PCDHA6-202ENST00000527624 IL2P60568 153 aa17.13■□□□□ 0.33
PCDHA6-202ENST00000527624 SH3BP2P78314 561 aa17.13■□□□□ 0.33
PCDHA6-202ENST00000527624 PPP1R3AQ16821 1122 aa17.13■□□□□ 0.33
PCDHA6-202ENST00000527624 ADIPOR2Q86V24 386 aa17.13■□□□□ 0.33
PCDHA6-202ENST00000527624 SNX32Q86XE0 403 aa17.13■□□□□ 0.33
PCDHA6-202ENST00000527624 CLDN19Q8N6F1 224 aa17.13■□□□□ 0.33
PCDHA6-202ENST00000527624 GRIN3AQ8TCU5 1115 aa17.13■□□□□ 0.33
PCDHA6-202ENST00000527624 SORCS1Q8WY21 1168 aa17.13■□□□□ 0.33
PCDHA6-202ENST00000527624 MAELQ96JY0 434 aaKnown RBP17.13■□□□□ 0.33
PCDHA6-202ENST00000527624 FAR2Q96K12 515 aa17.13■□□□□ 0.33
PCDHA6-202ENST00000527624 RTKNQ9BST9 563 aa17.13■□□□□ 0.33
PCDHA6-202ENST00000527624 SUV39H2Q9H5I1 410 aa17.13■□□□□ 0.33
PCDHA6-202ENST00000527624 ZNF385DQ9H6B1 395 aa17.13■□□□□ 0.33
PCDHA6-202ENST00000527624 GLYATL1P3A0A0U1RQE8 302 aa17.13■□□□□ 0.33
PCDHA6-202ENST00000527624 C5orf67F2Z3F1 127 aa17.13■□□□□ 0.33
PCDHA6-202ENST00000527624 PDE5AO76074 875 aa17.13■□□□□ 0.33
PCDHA6-202ENST00000527624 BAG2O95816 211 aa17.13■□□□□ 0.33
PCDHA6-202ENST00000527624 HNRNPA1P09651 372 aaKnown RBP eCLIP17.13■□□□□ 0.33
PCDHA6-202ENST00000527624 ITGALP20701 1170 aa17.13■□□□□ 0.33
PCDHA6-202ENST00000527624 EEF1DP29692 281 aaKnown RBP17.13■□□□□ 0.33
PCDHA6-202ENST00000527624 CLCN7P51798 805 aa17.13■□□□□ 0.33
PCDHA6-202ENST00000527624 ADARP55265 1226 aaKnown RBP17.13■□□□□ 0.33
PCDHA6-202ENST00000527624 GALNT1Q10472 559 aaPredicted RBP17.13■□□□□ 0.33
PCDHA6-202ENST00000527624 CHRNA6Q15825 494 aa17.13■□□□□ 0.33
PCDHA6-202ENST00000527624 CARD16Q5EG05 197 aa17.13■□□□□ 0.33
PCDHA6-202ENST00000527624 TMEM215Q68D42 235 aa17.13■□□□□ 0.33
PCDHA6-202ENST00000527624 PTRHD1Q6GMV3 140 aaKnown RBP17.13■□□□□ 0.33
PCDHA6-202ENST00000527624 CAPRIN2Q6IMN6 1127 aaKnown RBP17.13■□□□□ 0.33
PCDHA6-202ENST00000527624 CRTC1Q6UUV9 634 aa17.13■□□□□ 0.33
PCDHA6-202ENST00000527624 ADGRG6Q86SQ4 1221 aa17.13■□□□□ 0.33
PCDHA6-202ENST00000527624 ISG20Q96AZ6 181 aaKnown RBP17.13■□□□□ 0.33
PCDHA6-202ENST00000527624 ZNF707Q96C28 371 aaPredicted RBP17.13■□□□□ 0.33
PCDHA6-202ENST00000527624 CLPBQ9H078 707 aa17.13■□□□□ 0.33
PCDHA6-202ENST00000527624 S100A14Q9HCY8 104 aa17.13■□□□□ 0.33
PCDHA6-202ENST00000527624 COPG1Q9Y678 874 aaKnown RBP17.13■□□□□ 0.33
PCDHA6-202ENST00000527624 NOTCH4Q99466 2003 aa17.12■□□□□ 0.33
PCDHA6-202ENST00000527624 SORBS2O94875 1100 aaKnown RBP17.12■□□□□ 0.33
PCDHA6-202ENST00000527624 CA3P07451 260 aa17.12■□□□□ 0.33
PCDHA6-202ENST00000527624 AGTR2P50052 363 aa17.12■□□□□ 0.33
PCDHA6-202ENST00000527624 LRRC66Q68CR7 880 aa17.12■□□□□ 0.33
PCDHA6-202ENST00000527624 ELMSAN1Q6PJG2 1045 aa17.12■□□□□ 0.33
PCDHA6-202ENST00000527624 CERS6Q6ZMG9 384 aa17.12■□□□□ 0.33
PCDHA6-202ENST00000527624 RTL10Q7L3V2 364 aa17.12■□□□□ 0.33
PCDHA6-202ENST00000527624 SNX20Q7Z614 316 aa17.12■□□□□ 0.33
PCDHA6-202ENST00000527624 ADGRG2Q8IZP9 1017 aa17.12■□□□□ 0.33
PCDHA6-202ENST00000527624 CPSF7Q8N684 471 aaKnown RBP17.12■□□□□ 0.33
PCDHA6-202ENST00000527624 C12orf76Q8N812 135 aaPredicted RBP17.12■□□□□ 0.33
PCDHA6-202ENST00000527624 CEP70Q8NHQ1 597 aa17.12■□□□□ 0.33
PCDHA6-202ENST00000527624 ITFG1Q8TB96 612 aa17.12■□□□□ 0.33
PCDHA6-202ENST00000527624 TRPC4APQ8TEL6 797 aa17.12■□□□□ 0.33
PCDHA6-202ENST00000527624 CYB5D2Q8WUJ1 264 aa17.12■□□□□ 0.33
PCDHA6-202ENST00000527624 MEAF6Q9HAF1 191 aa17.12■□□□□ 0.33
PCDHA6-202ENST00000527624 MID1IP1Q9NPA3 183 aa17.12■□□□□ 0.33
PCDHA6-202ENST00000527624 UTP6Q9NYH9 597 aaKnown RBP17.12■□□□□ 0.33
PCDHA6-202ENST00000527624 TBC1D14Q9P2M4 693 aa17.12■□□□□ 0.33
PCDHA6-202ENST00000527624 MRPS23Q9Y3D9 190 aaKnown RBP17.12■□□□□ 0.33
PCDHA6-202ENST00000527624 PRSS21Q9Y6M0 314 aa17.12■□□□□ 0.33
PCDHA6-202ENST00000527624 ATP6AP2A0A1C7CYW4 349 aa17.12■□□□□ 0.33
PCDHA6-202ENST00000527624 ATP6AP2O75787 350 aa17.12■□□□□ 0.33
PCDHA6-202ENST00000527624 CDK14O94921 469 aa17.12■□□□□ 0.33
PCDHA6-202ENST00000527624 HSPA1AP0DMV8 641 aaKnown RBP17.12■□□□□ 0.33
PCDHA6-202ENST00000527624 HSPA1BP0DMV9 641 aaKnown RBP17.12■□□□□ 0.33
PCDHA6-202ENST00000527624 CHRM1P11229 460 aaPredicted RBP17.12■□□□□ 0.33
PCDHA6-202ENST00000527624 TBL3Q12788 808 aaKnown RBP17.12■□□□□ 0.33
PCDHA6-202ENST00000527624 GEN1Q17RS7 908 aa17.12■□□□□ 0.33
PCDHA6-202ENST00000527624 FBXW8Q8N3Y1 598 aa17.12■□□□□ 0.33
PCDHA6-202ENST00000527624 PCDH20Q8N6Y1 951 aaKnown RBP17.12■□□□□ 0.33
PCDHA6-202ENST00000527624 LEMD2Q8NC56 503 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms