RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 ARHGEF16Q5VV41 709 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 C1orf146Q5VVC0 180 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 PRMT9Q6P2P2 845 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 ALKBH5Q6P6C2 394 aaKnown RBP3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 IYDQ6PHW0 289 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 LINC00299Q6ZSB3 139 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 LPCAT2Q7L5N7 544 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 KRT26Q7Z3Y9 468 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 SETD3Q86TU7 594 aaPredicted RBP3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 ZNF589Q86UQ0 364 aaPredicted RBP3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 GPBP1Q86WP2 473 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 ECHDC2Q86YB7 292 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 ERO1BQ86YB8 467 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 THNSL2Q86YJ6 484 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 C2CD5Q86YS7 1000 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 BBS7Q8IWZ6 715 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 RAVER1Q8IY67 606 aaKnown RBP3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 C16orf71Q8IYS4 520 aaPredicted RBP3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 ZNF34Q8IZ26 560 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 CCDC33Q8N5R6 958 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 ANKRD13CQ8N6S4 541 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 ZNF540Q8NDQ6 660 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 OR8K3Q8NH51 312 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 ZNF420Q8TAQ5 688 aaPredicted RBP3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 TBC1D15Q8TC07 691 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 LRRC20Q8TCA0 184 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 ZNF398Q8TD17 642 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 MCOLN3Q8TDD5 553 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 SETD7Q8WTS6 366 aaKnown RBP3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 KCTD4Q8WVF5 259 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 CKAP2Q8WWK9 683 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 POMGNT1Q8WZA1 660 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 AHCYL2Q96HN2 611 aaKnown RBP3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 CNDP2Q96KP4 475 aaKnown RBP3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 CMTM3Q96MX0 182 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 RMDN3Q96TC7 470 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 DOK1Q99704 481 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 NTPCRQ9BSD7 190 aaKnown RBP3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 ZSCAN5AQ9BUG6 496 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 CADM1Q9BY67 442 aaKnown RBP3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 WNT8AQ9H1J5 351 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 HIPK3Q9H422 1215 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 TFB2MQ9H5Q4 396 aaKnown RBP3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 DHX33Q9H6R0 707 aaKnown RBP3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 TRIM45Q9H8W5 580 aaPredicted RBP3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 EPB41L5Q9HCM4 733 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 SLC35C2Q9NQQ7 365 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 SACM1LQ9NTJ5 587 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 ABHD10Q9NUJ1 306 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 FGFR1OP2Q9NVK5 253 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 ZNF624Q9P2J8 865 aaPredicted RBP3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 CYB5R1Q9UHQ9 305 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 KCNE5Q9UJ90 142 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 APPL1Q9UKG1 709 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 RAB26Q9ULW5 256 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 RPH3AQ9Y2J0 694 aaPredicted RBP3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 SIK3Q9Y2K2 1263 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 ACOT9Q9Y305 439 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 PRELID3BQ9Y3B1 194 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 CHTOPQ9Y3Y2 248 aaKnown RBP3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 GMPPBQ9Y5P6 360 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 CPQQ9Y646 472 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 MAP2P11137 1827 aaKnown RBP3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 CFTRP13569 1480 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 ZNF518AQ6AHZ1 1483 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 QRICH2Q9H0J4 1663 aa3.71□□□□□ -1.82
CLNS1A-209ENST00000527299 CLUHO75153 1309 aa3.7□□□□□ -1.82
CLNS1A-209ENST00000527299 SALL1Q9NSC2 1324 aa3.7□□□□□ -1.82
CLNS1A-209ENST00000527299 ITSN1Q15811 1721 aa3.7□□□□□ -1.82
CLNS1A-209ENST00000527299 SPHKAPQ2M3C7 1700 aa3.7□□□□□ -1.82
CLNS1A-209ENST00000527299 A0A0G2JPF8 293 aa3.7□□□□□ -1.82
CLNS1A-209ENST00000527299 A0A1W2PQ72 361 aa3.7□□□□□ -1.82
CLNS1A-209ENST00000527299 LOC390937A0A1W2PQ73 354 aa3.7□□□□□ -1.82
CLNS1A-209ENST00000527299 LRRIQ4A6NIV6 560 aa3.7□□□□□ -1.82
CLNS1A-209ENST00000527299 ARGFXA6NJG6 315 aa3.7□□□□□ -1.82
CLNS1A-209ENST00000527299 TRIM75PA6NK02 468 aa3.7□□□□□ -1.82
CLNS1A-209ENST00000527299 A6NL46 340 aa3.7□□□□□ -1.82
CLNS1A-209ENST00000527299 HNRNPCL3B7ZW38 293 aa3.7□□□□□ -1.82
CLNS1A-209ENST00000527299 H3BSA7 217 aa3.7□□□□□ -1.82
CLNS1A-209ENST00000527299 CACNB4O00305 520 aaPredicted RBP3.7□□□□□ -1.82
CLNS1A-209ENST00000527299 CES2O00748 559 aa3.7□□□□□ -1.82
CLNS1A-209ENST00000527299 KCNN4O15554 427 aa3.7□□□□□ -1.82
CLNS1A-209ENST00000527299 TGM5O43548 720 aa3.7□□□□□ -1.82
CLNS1A-209ENST00000527299 SPOPO43791 374 aa3.7□□□□□ -1.82
CLNS1A-209ENST00000527299 UGT1A9O60656 530 aa3.7□□□□□ -1.82
CLNS1A-209ENST00000527299 SPAG7O75391 227 aa3.7□□□□□ -1.82
CLNS1A-209ENST00000527299 CIAO1O76071 339 aa3.7□□□□□ -1.82
CLNS1A-209ENST00000527299 TGDSO95455 350 aa3.7□□□□□ -1.82
CLNS1A-209ENST00000527299 GUCA1CO95843 209 aa3.7□□□□□ -1.82
CLNS1A-209ENST00000527299 GYPCP04921 128 aa3.7□□□□□ -1.82
CLNS1A-209ENST00000527299 PRKCGP05129 697 aa3.7□□□□□ -1.82
CLNS1A-209ENST00000527299 CALB1P05937 261 aa3.7□□□□□ -1.82
CLNS1A-209ENST00000527299 IGKV2-30P06310 120 aa3.7□□□□□ -1.82
CLNS1A-209ENST00000527299 HSMCR30P0CW71 290 aa3.7□□□□□ -1.82
CLNS1A-209ENST00000527299 HNRNPCL4P0DMR1 293 aa3.7□□□□□ -1.82
CLNS1A-209ENST00000527299 THRAP10827 490 aa3.7□□□□□ -1.82
CLNS1A-209ENST00000527299 EEF2P13639 858 aaKnown RBP3.7□□□□□ -1.82
CLNS1A-209ENST00000527299 NPR1P16066 1061 aa3.7□□□□□ -1.82
CLNS1A-209ENST00000527299 TMEM11P17152 192 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms