RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 TBL1XO60907 577 aa17.42■□□□□ 0.38
USH1C-205ENST00000527020 VPS4BO75351 444 aa17.42■□□□□ 0.38
USH1C-205ENST00000527020 BMP1P13497 986 aa17.42■□□□□ 0.38
USH1C-205ENST00000527020 IDO1P14902 403 aa17.42■□□□□ 0.38
USH1C-205ENST00000527020 HSPA13P48723 471 aa17.42■□□□□ 0.38
USH1C-205ENST00000527020 MRPL19P49406 292 aaKnown RBP17.42■□□□□ 0.38
USH1C-205ENST00000527020 IL2P60568 153 aa17.42■□□□□ 0.38
USH1C-205ENST00000527020 MTX3Q5HYI7 312 aa17.42■□□□□ 0.38
USH1C-205ENST00000527020 TXNDC11Q6PKC3 985 aa17.42■□□□□ 0.38
USH1C-205ENST00000527020 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.42■□□□□ 0.38
USH1C-205ENST00000527020 MFN1Q8IWA4 741 aa17.42■□□□□ 0.38
USH1C-205ENST00000527020 OR2T11Q8NH01 316 aa17.42■□□□□ 0.38
USH1C-205ENST00000527020 KCNJ9Q92806 393 aa17.42■□□□□ 0.38
USH1C-205ENST00000527020 EME1Q96AY2 570 aa17.42■□□□□ 0.38
USH1C-205ENST00000527020 TRMT2BQ96GJ1 504 aaKnown RBP17.42■□□□□ 0.38
USH1C-205ENST00000527020 SLC22A12Q96S37 553 aa17.42■□□□□ 0.38
USH1C-205ENST00000527020 NUSAP1Q9BXS6 441 aaKnown RBP17.42■□□□□ 0.38
USH1C-205ENST00000527020 AIG1Q9NVV5 245 aa17.42■□□□□ 0.38
USH1C-205ENST00000527020 IL17CQ9P0M4 197 aa17.42■□□□□ 0.38
USH1C-205ENST00000527020 EIF2B4Q9UI10 523 aaKnown RBP17.42■□□□□ 0.38
USH1C-205ENST00000527020 ZNF106Q9H2Y7 1883 aaKnown RBP17.42■□□□□ 0.38
USH1C-205ENST00000527020 ZNF839A8K0R7 811 aa17.41■□□□□ 0.38
USH1C-205ENST00000527020 ANGPT2O15123 496 aa17.41■□□□□ 0.38
USH1C-205ENST00000527020 SLC6A2P23975 617 aa17.41■□□□□ 0.38
USH1C-205ENST00000527020 APLP1P51693 650 aa17.41■□□□□ 0.38
USH1C-205ENST00000527020 CLCN7P51798 805 aa17.41■□□□□ 0.38
USH1C-205ENST00000527020 ADARP55265 1226 aaKnown RBP17.41■□□□□ 0.38
USH1C-205ENST00000527020 CAPRIN1Q14444 709 aaKnown RBP17.41■□□□□ 0.38
USH1C-205ENST00000527020 ATXN7L2Q5T6C5 722 aaPredicted RBP17.41■□□□□ 0.38
USH1C-205ENST00000527020 IRAK1BP1Q5VVH5 260 aa17.41■□□□□ 0.38
USH1C-205ENST00000527020 SLC30A9Q6PML9 568 aa17.41■□□□□ 0.38
USH1C-205ENST00000527020 ZNF783Q6ZMS7 281 aa17.41■□□□□ 0.38
USH1C-205ENST00000527020 GPSM1Q86YR5 675 aa17.41■□□□□ 0.38
USH1C-205ENST00000527020 GALNT15Q8N3T1 639 aa17.41■□□□□ 0.38
USH1C-205ENST00000527020 CARNMT1Q8N4J0 409 aa17.41■□□□□ 0.38
USH1C-205ENST00000527020 OR2T34Q8NGX1 318 aa17.41■□□□□ 0.38
USH1C-205ENST00000527020 OR2T3Q8NH03 318 aa17.41■□□□□ 0.38
USH1C-205ENST00000527020 WFDC5Q8TCV5 224 aa17.41■□□□□ 0.38
USH1C-205ENST00000527020 ADAMTS19Q8TE59 1207 aa17.41■□□□□ 0.38
USH1C-205ENST00000527020 ZNF597Q96LX8 424 aa17.41■□□□□ 0.38
USH1C-205ENST00000527020 FEM1AQ9BSK4 669 aa17.41■□□□□ 0.38
USH1C-205ENST00000527020 HGH1Q9BTY7 390 aa17.41■□□□□ 0.38
USH1C-205ENST00000527020 CFHR5Q9BXR6 569 aa17.41■□□□□ 0.38
USH1C-205ENST00000527020 FCF1Q9Y324 198 aaKnown RBP17.41■□□□□ 0.38
USH1C-205ENST00000527020 GREM1O60565 184 aa17.4■□□□□ 0.38
USH1C-205ENST00000527020 CRCPO75575 148 aa17.4■□□□□ 0.38
USH1C-205ENST00000527020 PGM3O95394 542 aa17.4■□□□□ 0.38
USH1C-205ENST00000527020 CYBBP04839 570 aa17.4■□□□□ 0.38
USH1C-205ENST00000527020 UROSP10746 265 aa17.4■□□□□ 0.38
USH1C-205ENST00000527020 HSD17B1P14061 328 aa17.4■□□□□ 0.38
USH1C-205ENST00000527020 PTGER3P43115 390 aa17.4■□□□□ 0.38
USH1C-205ENST00000527020 CCL23P55773 120 aa17.4■□□□□ 0.38
USH1C-205ENST00000527020 POLE2P56282 527 aa17.4■□□□□ 0.38
USH1C-205ENST00000527020 ZXDBP98169 803 aa17.4■□□□□ 0.38
USH1C-205ENST00000527020 IKBKEQ14164 716 aa17.4■□□□□ 0.38
USH1C-205ENST00000527020 NRF1Q16656 503 aa17.4■□□□□ 0.38
USH1C-205ENST00000527020 PABPC1LQ4VXU2 614 aaKnown RBP17.4■□□□□ 0.38
USH1C-205ENST00000527020 INO80DQ53TQ3 878 aaPredicted RBP17.4■□□□□ 0.38
USH1C-205ENST00000527020 COQ5Q5HYK3 327 aa17.4■□□□□ 0.38
USH1C-205ENST00000527020 PRMT9Q6P2P2 845 aa17.4■□□□□ 0.38
USH1C-205ENST00000527020 SCIMPQ6UWF3 145 aa17.4■□□□□ 0.38
USH1C-205ENST00000527020 SPATA19Q7Z5L4 167 aa17.4■□□□□ 0.38
USH1C-205ENST00000527020 AMIGO2Q86SJ2 522 aa17.4■□□□□ 0.38
USH1C-205ENST00000527020 SATL1Q86VE3 508 aa17.4■□□□□ 0.38
USH1C-205ENST00000527020 AHI1Q8N157 1196 aa17.4■□□□□ 0.38
USH1C-205ENST00000527020 NCSTNQ92542 709 aa17.4■□□□□ 0.38
USH1C-205ENST00000527020 ZUFSPQ96AP4 578 aa17.4■□□□□ 0.38
USH1C-205ENST00000527020 PBXIP1Q96AQ6 731 aa17.4■□□□□ 0.38
USH1C-205ENST00000527020 LRRC58Q96CX6 371 aa17.4■□□□□ 0.38
USH1C-205ENST00000527020 ALG14Q96F25 216 aa17.4■□□□□ 0.38
USH1C-205ENST00000527020 ACOX2Q99424 681 aa17.4■□□□□ 0.38
USH1C-205ENST00000527020 DNMT3BQ9UBC3 853 aaKnown RBP17.4■□□□□ 0.38
USH1C-205ENST00000527020 HSFX1Q9UBD0 423 aa17.4■□□□□ 0.38
USH1C-205ENST00000527020 ZNF711Q9Y462 761 aa17.4■□□□□ 0.38
USH1C-205ENST00000527020 PCDHB9Q9Y5E1 797 aa17.4■□□□□ 0.38
USH1C-205ENST00000527020 SNX13Q9Y5W8 968 aa17.4■□□□□ 0.38
USH1C-205ENST00000527020 ZFC3H1O60293 1989 aaKnown RBP17.4■□□□□ 0.38
USH1C-205ENST00000527020 H0Y626 953 aa17.4■□□□□ 0.38
USH1C-205ENST00000527020 H0YJX3 145 aa17.4■□□□□ 0.38
USH1C-205ENST00000527020 GFRA2O00451 464 aa17.4■□□□□ 0.38
USH1C-205ENST00000527020 MLYCDO95822 493 aa17.4■□□□□ 0.38
USH1C-205ENST00000527020 CXCL10P02778 98 aa17.4■□□□□ 0.38
USH1C-205ENST00000527020 ESR1P03372 595 aa17.4■□□□□ 0.38
USH1C-205ENST00000527020 CA5AP35218 305 aa17.4■□□□□ 0.38
USH1C-205ENST00000527020 GRIA3P42263 894 aa17.4■□□□□ 0.38
USH1C-205ENST00000527020 NAA20P61599 178 aa17.4■□□□□ 0.38
USH1C-205ENST00000527020 IRX1P78414 480 aaPredicted RBP17.4■□□□□ 0.38
USH1C-205ENST00000527020 TWF1Q12792 350 aa17.4■□□□□ 0.38
USH1C-205ENST00000527020 RBBP7Q16576 425 aa17.4■□□□□ 0.38
USH1C-205ENST00000527020 KIAA1841Q6NSI8 718 aa17.4■□□□□ 0.38
USH1C-205ENST00000527020 TAS2R42Q7RTR8 314 aa17.4■□□□□ 0.38
USH1C-205ENST00000527020 LYSMD3Q7Z3D4 306 aa17.4■□□□□ 0.38
USH1C-205ENST00000527020 CHERPQ8IWX8 916 aaKnown RBP17.4■□□□□ 0.38
USH1C-205ENST00000527020 CANT1Q8WVQ1 401 aa17.4■□□□□ 0.38
USH1C-205ENST00000527020 CAPNS2Q96L46 248 aa17.4■□□□□ 0.38
USH1C-205ENST00000527020 SLC29A1Q99808 456 aa17.4■□□□□ 0.38
USH1C-205ENST00000527020 VPS51Q9UID3 782 aa17.4■□□□□ 0.38
USH1C-205ENST00000527020 PCDHA9Q9Y5H5 950 aa17.4■□□□□ 0.38
USH1C-205ENST00000527020 KIAA1671Q9BY89 1806 aa17.39■□□□□ 0.37
USH1C-205ENST00000527020 MYOCOSA0A1B0GUC4 107 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms