RNA–Protein interactions for RNA: ENST00000526357.5

CTNND1-213, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,994 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-213ENST00000526357 FAM124AQ86V42 546 aa9.36□□□□□ -0.91
CTNND1-213ENST00000526357 ALYREFQ86V81 257 aaKnown RBP9.36□□□□□ -0.91
CTNND1-213ENST00000526357 SVOPLQ8N434 492 aa9.36□□□□□ -0.91
CTNND1-213ENST00000526357 ANKRD52Q8NB46 1076 aa9.36□□□□□ -0.91
CTNND1-213ENST00000526357 OR4C6Q8NH72 309 aa9.36□□□□□ -0.91
CTNND1-213ENST00000526357 XAGE5Q8WWM1 108 aa9.36□□□□□ -0.91
CTNND1-213ENST00000526357 CEP295NLQ96MC4 621 aa9.36□□□□□ -0.91
CTNND1-213ENST00000526357 MFSD14AQ96MC6 490 aa9.36□□□□□ -0.91
CTNND1-213ENST00000526357 SLC39A3Q9BRY0 314 aa9.36□□□□□ -0.91
CTNND1-213ENST00000526357 TPK1Q9H3S4 243 aa9.36□□□□□ -0.91
CTNND1-213ENST00000526357 INTS10Q9NVR2 710 aaKnown RBP9.36□□□□□ -0.91
CTNND1-213ENST00000526357 RGS17Q9UGC6 210 aaPredicted RBP9.36□□□□□ -0.91
CTNND1-213ENST00000526357 SPEF1Q9Y4P9 236 aa9.36□□□□□ -0.91
CTNND1-213ENST00000526357 TELO2Q9Y4R8 837 aa9.36□□□□□ -0.91
CTNND1-213ENST00000526357 PCDHGB7Q9Y5F8 929 aa9.36□□□□□ -0.91
CTNND1-213ENST00000526357 PCDHGB1Q9Y5G3 927 aa9.36□□□□□ -0.91
CTNND1-213ENST00000526357 PTCH2Q9Y6C5 1203 aa9.36□□□□□ -0.91
CTNND1-213ENST00000526357 WASHC1A8K0Z3 465 aa9.36□□□□□ -0.91
CTNND1-213ENST00000526357 WASH3PC4AMC7 463 aa9.36□□□□□ -0.91
CTNND1-213ENST00000526357 FAM86B1E9PN63 330 aa9.36□□□□□ -0.91
CTNND1-213ENST00000526357 PSMD9O00233 223 aa9.36□□□□□ -0.91
CTNND1-213ENST00000526357 LGALS2P05162 132 aa9.36□□□□□ -0.91
CTNND1-213ENST00000526357 CD2P06729 351 aa9.36□□□□□ -0.91
CTNND1-213ENST00000526357 GRK6P43250 576 aa9.36□□□□□ -0.91
CTNND1-213ENST00000526357 OR3A3P47888 321 aa9.36□□□□□ -0.91
CTNND1-213ENST00000526357 OR3A2P47893 321 aa9.36□□□□□ -0.91
CTNND1-213ENST00000526357 WASH2PQ6VEQ5 465 aa9.36□□□□□ -0.91
CTNND1-213ENST00000526357 C12orf50Q8NA57 414 aaPredicted RBP9.36□□□□□ -0.91
CTNND1-213ENST00000526357 TRAPPC12Q8WVT3 735 aa9.36□□□□□ -0.91
CTNND1-213ENST00000526357 UFD1Q92890 307 aa9.36□□□□□ -0.91
CTNND1-213ENST00000526357 HDAC10Q969S8 669 aa9.36□□□□□ -0.91
CTNND1-213ENST00000526357 JSRP1Q96MG2 331 aaPredicted RBP9.36□□□□□ -0.91
CTNND1-213ENST00000526357 RCOR3Q9P2K3 495 aaPredicted RBP9.36□□□□□ -0.91
CTNND1-213ENST00000526357 ALG5Q9Y673 324 aa9.36□□□□□ -0.91
CTNND1-213ENST00000526357 C5orf51A6NDU8 294 aa9.36□□□□□ -0.91
CTNND1-213ENST00000526357 H3BNX3 289 aa9.36□□□□□ -0.91
CTNND1-213ENST00000526357 RPP40O75818 363 aaKnown RBP9.36□□□□□ -0.91
CTNND1-213ENST00000526357 RENP00797 406 aa9.36□□□□□ -0.91
CTNND1-213ENST00000526357 ZNF20P17024 532 aa9.36□□□□□ -0.91
CTNND1-213ENST00000526357 KIR3DL1P43629 444 aa9.36□□□□□ -0.91
CTNND1-213ENST00000526357 EIPR1Q53HC9 387 aa9.36□□□□□ -0.91
CTNND1-213ENST00000526357 BRMS1LQ5PSV4 323 aa9.36□□□□□ -0.91
CTNND1-213ENST00000526357 DUPD1Q68J44 220 aa9.36□□□□□ -0.91
CTNND1-213ENST00000526357 DCLRE1AQ6PJP8 1040 aa9.36□□□□□ -0.91
CTNND1-213ENST00000526357 FAM205AQ6ZU69 1335 aa9.36□□□□□ -0.91
CTNND1-213ENST00000526357 SYVN1Q86TM6 617 aa9.36□□□□□ -0.91
CTNND1-213ENST00000526357 SPAG16Q8N0X2 631 aa9.36□□□□□ -0.91
CTNND1-213ENST00000526357 ARL10Q8N8L6 244 aa9.36□□□□□ -0.91
CTNND1-213ENST00000526357 NAT14Q8WUY8 206 aa9.36□□□□□ -0.91
CTNND1-213ENST00000526357 SLC35C1Q96A29 364 aa9.36□□□□□ -0.91
CTNND1-213ENST00000526357 NSMCE3Q96MG7 304 aa9.36□□□□□ -0.91
CTNND1-213ENST00000526357 PORCNQ9H237 461 aa9.36□□□□□ -0.91
CTNND1-213ENST00000526357 SALL1Q9NSC2 1324 aa9.36□□□□□ -0.91
CTNND1-213ENST00000526357 SQORQ9Y6N5 450 aa9.36□□□□□ -0.91
CTNND1-213ENST00000526357 NCANO14594 1321 aa9.36□□□□□ -0.91
CTNND1-213ENST00000526357 GLYATL1P3A0A0U1RQE8 302 aa9.36□□□□□ -0.91
CTNND1-213ENST00000526357 A0A1W2PQ67 120 aa9.36□□□□□ -0.91
CTNND1-213ENST00000526357 ELOVL7A1L3X0 281 aa9.36□□□□□ -0.91
CTNND1-213ENST00000526357 ANKRD63C9JTQ0 380 aa9.36□□□□□ -0.91
CTNND1-213ENST00000526357 GNB5O14775 395 aa9.36□□□□□ -0.91
CTNND1-213ENST00000526357 GSC2O15499 205 aa9.36□□□□□ -0.91
CTNND1-213ENST00000526357 ALAS2P22557 587 aa9.36□□□□□ -0.91
CTNND1-213ENST00000526357 DDX6P26196 483 aaKnown RBP eCLIP9.36□□□□□ -0.911e-7■■□□□ 13.6
CTNND1-213ENST00000526357 RPS9P46781 194 aaKnown RBP9.36□□□□□ -0.91
CTNND1-213ENST00000526357 SP140Q13342 867 aa9.36□□□□□ -0.91
CTNND1-213ENST00000526357 C1orf186Q6ZWK4 172 aa9.36□□□□□ -0.91
CTNND1-213ENST00000526357 DNAJB7Q7Z6W7 309 aaPredicted RBP9.36□□□□□ -0.91
CTNND1-213ENST00000526357 SPPL2CQ8IUH8 684 aa9.36□□□□□ -0.91
CTNND1-213ENST00000526357 PQLC1Q8N2U9 271 aa9.36□□□□□ -0.91
CTNND1-213ENST00000526357 SPATA6LQ8N4H0 392 aa9.36□□□□□ -0.91
CTNND1-213ENST00000526357 TP53INP1Q96A56 240 aa9.36□□□□□ -0.91
CTNND1-213ENST00000526357 ELMO3Q96BJ8 720 aa9.36□□□□□ -0.91
CTNND1-213ENST00000526357 COQ8BQ96D53 544 aa9.36□□□□□ -0.91
CTNND1-213ENST00000526357 MTMR9Q96QG7 549 aa9.36□□□□□ -0.91
CTNND1-213ENST00000526357 S100A14Q9HCY8 104 aa9.36□□□□□ -0.91
CTNND1-213ENST00000526357 TRNAU1APQ9NX07 287 aaKnown RBP9.36□□□□□ -0.91
CTNND1-213ENST00000526357 DNAJC28Q9NX36 388 aa9.36□□□□□ -0.91
CTNND1-213ENST00000526357 NUDT4Q9NZJ9 180 aa9.36□□□□□ -0.91
CTNND1-213ENST00000526357 FBXO5Q9UKT4 447 aa9.36□□□□□ -0.91
CTNND1-213ENST00000526357 TSPAN4O14817 238 aa9.35□□□□□ -0.91
CTNND1-213ENST00000526357 ADAMDEC1O15204 470 aa9.35□□□□□ -0.91
CTNND1-213ENST00000526357 TPD52L2O43399 206 aaKnown RBP9.35□□□□□ -0.91
CTNND1-213ENST00000526357 SHBGP04278 402 aa9.35□□□□□ -0.91
CTNND1-213ENST00000526357 ITPKAP23677 461 aa9.35□□□□□ -0.91
CTNND1-213ENST00000526357 CTBP1Q13363 440 aa9.35□□□□□ -0.91
CTNND1-213ENST00000526357 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.35□□□□□ -0.91
CTNND1-213ENST00000526357 INO80EQ8NBZ0 244 aaPredicted RBP9.35□□□□□ -0.91
CTNND1-213ENST00000526357 FAM13CQ8NE31 585 aa9.35□□□□□ -0.91
CTNND1-213ENST00000526357 OR2L8Q8NGY9 312 aa9.35□□□□□ -0.91
CTNND1-213ENST00000526357 SIPA1Q96FS4 1042 aa9.35□□□□□ -0.91
CTNND1-213ENST00000526357 ZNF471Q9BX82 626 aaPredicted RBP9.35□□□□□ -0.91
CTNND1-213ENST00000526357 CCDC86Q9H6F5 360 aaKnown RBP9.35□□□□□ -0.91
CTNND1-213ENST00000526357 LRRC19Q9H756 370 aa9.35□□□□□ -0.91
CTNND1-213ENST00000526357 ATPIF1Q9UII2 106 aa9.35□□□□□ -0.91
CTNND1-213ENST00000526357 BTNL10A8MVZ5 291 aa9.35□□□□□ -0.91
CTNND1-213ENST00000526357 ENTPD5O75356 428 aa9.35□□□□□ -0.91
CTNND1-213ENST00000526357 CLDN9O95484 217 aa9.35□□□□□ -0.91
CTNND1-213ENST00000526357 PPM1AP35813 382 aa9.35□□□□□ -0.91
CTNND1-213ENST00000526357 KLHL22Q53GT1 634 aa9.35□□□□□ -0.91
CTNND1-213ENST00000526357 SATL1Q86VE3 508 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms