RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 N4BP2L1Q5TBK1 243 aaPredicted RBP7.04□□□□□ -1.28
VPS11-201ENST00000524454 ZDHHC20Q5W0Z9 365 aa7.04□□□□□ -1.28
VPS11-201ENST00000524454 PMS2CLQ68D20 193 aa7.04□□□□□ -1.28
VPS11-201ENST00000524454 FAM45BPQ6NSW5 357 aa7.04□□□□□ -1.28
VPS11-201ENST00000524454 KLC3Q6P597 504 aa7.04□□□□□ -1.28
VPS11-201ENST00000524454 NCEH1Q6PIU2 408 aa7.04□□□□□ -1.28
VPS11-201ENST00000524454 CERS6Q6ZMG9 384 aa7.04□□□□□ -1.28
VPS11-201ENST00000524454 VASH1Q7L8A9 365 aaPredicted RBP7.04□□□□□ -1.28
VPS11-201ENST00000524454 PIWIL4Q7Z3Z4 852 aaKnown RBP7.04□□□□□ -1.28
VPS11-201ENST00000524454 KIAA0907Q7Z7F0 614 aaPredicted RBP7.04□□□□□ -1.28
VPS11-201ENST00000524454 SDCCAG8Q86SQ7 713 aaPredicted RBP7.04□□□□□ -1.28
VPS11-201ENST00000524454 CRLF3Q8IUI8 442 aa7.04□□□□□ -1.28
VPS11-201ENST00000524454 WDR75Q8IWA0 830 aaKnown RBP7.04□□□□□ -1.28
VPS11-201ENST00000524454 UNC5BQ8IZJ1 945 aa7.04□□□□□ -1.28
VPS11-201ENST00000524454 AHI1Q8N157 1196 aa7.04□□□□□ -1.28
VPS11-201ENST00000524454 STK40Q8N2I9 435 aa7.04□□□□□ -1.28
VPS11-201ENST00000524454 KDM1BQ8NB78 822 aa7.04□□□□□ -1.28
VPS11-201ENST00000524454 FAM45AQ8TCE6 357 aa7.04□□□□□ -1.28
VPS11-201ENST00000524454 WFIKKN2Q8TEU8 576 aa7.04□□□□□ -1.28
VPS11-201ENST00000524454 PPP4R1Q8TF05 950 aa7.04□□□□□ -1.28
VPS11-201ENST00000524454 PDCD6IPQ8WUM4 868 aaKnown RBP7.04□□□□□ -1.28
VPS11-201ENST00000524454 RMDN1Q96DB5 314 aa7.04□□□□□ -1.28
VPS11-201ENST00000524454 SPACA7Q96KW9 195 aa7.04□□□□□ -1.28
VPS11-201ENST00000524454 RPL10LQ96L21 214 aaKnown RBP7.04□□□□□ -1.28
VPS11-201ENST00000524454 MRGPRX3Q96LB0 322 aa7.04□□□□□ -1.28
VPS11-201ENST00000524454 UBXN10Q96LJ8 280 aa7.04□□□□□ -1.28
VPS11-201ENST00000524454 ZNF778Q96MU6 729 aa7.04□□□□□ -1.28
VPS11-201ENST00000524454 LRRC37BQ96QE4 947 aa7.04□□□□□ -1.28
VPS11-201ENST00000524454 AGAP2Q99490 1192 aa7.04□□□□□ -1.28
VPS11-201ENST00000524454 MRPL57Q9BQC6 102 aaKnown RBP7.04□□□□□ -1.28
VPS11-201ENST00000524454 APOL2Q9BQE5 337 aa7.04□□□□□ -1.28
VPS11-201ENST00000524454 TRMOQ9BU70 441 aa7.04□□□□□ -1.28
VPS11-201ENST00000524454 SPON2Q9BUD6 331 aa7.04□□□□□ -1.28
VPS11-201ENST00000524454 CPEB1Q9BZB8 566 aaKnown RBP7.04□□□□□ -1.28
VPS11-201ENST00000524454 SLC13A1Q9BZW2 595 aa7.04□□□□□ -1.28
VPS11-201ENST00000524454 WWP1Q9H0M0 922 aa7.04□□□□□ -1.28
VPS11-201ENST00000524454 MRPL46Q9H2W6 279 aaKnown RBP7.04□□□□□ -1.28
VPS11-201ENST00000524454 ATP13A3Q9H7F0 1226 aa7.04□□□□□ -1.28
VPS11-201ENST00000524454 NMRAL1Q9HBL8 299 aa7.04□□□□□ -1.28
VPS11-201ENST00000524454 NOD2Q9HC29 1040 aa7.04□□□□□ -1.28
VPS11-201ENST00000524454 MLXIPLQ9NP71 852 aa7.04□□□□□ -1.28
VPS11-201ENST00000524454 SEMA4GQ9NTN9 838 aa7.04□□□□□ -1.28
VPS11-201ENST00000524454 TXLNGQ9NUQ3 528 aa7.04□□□□□ -1.28
VPS11-201ENST00000524454 LHX3Q9UBR4 397 aa7.04□□□□□ -1.28
VPS11-201ENST00000524454 VPS51Q9UID3 782 aa7.04□□□□□ -1.28
VPS11-201ENST00000524454 PRDM4Q9UKN5 801 aa7.04□□□□□ -1.28
VPS11-201ENST00000524454 EMCNQ9ULC0 261 aa7.04□□□□□ -1.28
VPS11-201ENST00000524454 TMCO1Q9UM00 188 aa7.04□□□□□ -1.28
VPS11-201ENST00000524454 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.04□□□□□ -1.28
VPS11-201ENST00000524454 PPIL1Q9Y3C6 166 aa7.04□□□□□ -1.28
VPS11-201ENST00000524454 WASF2Q9Y6W5 498 aa7.04□□□□□ -1.28
VPS11-201ENST00000524454 SDK1Q7Z5N4 2213 aa7.04□□□□□ -1.28
VPS11-201ENST00000524454 TP53BP1Q12888 1972 aaPredicted RBP7.04□□□□□ -1.28
VPS11-201ENST00000524454 PLXNA2O75051 1894 aa7.03□□□□□ -1.28
VPS11-201ENST00000524454 FRYLO94915 3013 aa7.03□□□□□ -1.28
VPS11-201ENST00000524454 OTOGLQ3ZCN5 2332 aa7.03□□□□□ -1.28
VPS11-201ENST00000524454 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.03□□□□□ -1.28
VPS11-201ENST00000524454 FAM95CA0A1B0GW59 222 aa7.03□□□□□ -1.28
VPS11-201ENST00000524454 ANKRD66B4E2M5 251 aa7.03□□□□□ -1.28
VPS11-201ENST00000524454 TARM1B6A8C7 271 aa7.03□□□□□ -1.28
VPS11-201ENST00000524454 MYO1CO00159 1063 aa7.03□□□□□ -1.28
VPS11-201ENST00000524454 PIAS1O75925 651 aa7.03□□□□□ -1.28
VPS11-201ENST00000524454 RHOBTB1O94844 696 aa7.03□□□□□ -1.28
VPS11-201ENST00000524454 WISP3O95389 354 aaPredicted RBP7.03□□□□□ -1.28
VPS11-201ENST00000524454 IGSF6O95976 241 aa7.03□□□□□ -1.28
VPS11-201ENST00000524454 PRLP01236 227 aa7.03□□□□□ -1.28
VPS11-201ENST00000524454 ASLP04424 464 aa7.03□□□□□ -1.28
VPS11-201ENST00000524454 RBP1P09455 135 aa7.03□□□□□ -1.28
VPS11-201ENST00000524454 NEFHP12036 1026 aa7.03□□□□□ -1.28
VPS11-201ENST00000524454 CPA3P15088 417 aa7.03□□□□□ -1.28
VPS11-201ENST00000524454 TPH1P17752 444 aa7.03□□□□□ -1.28
VPS11-201ENST00000524454 ITPKAP23677 461 aa7.03□□□□□ -1.28
VPS11-201ENST00000524454 GABRB3P28472 473 aa7.03□□□□□ -1.28
VPS11-201ENST00000524454 SERPINA4P29622 427 aa7.03□□□□□ -1.28
VPS11-201ENST00000524454 HMGCLP35914 325 aa7.03□□□□□ -1.28
VPS11-201ENST00000524454 CHRNA4P43681 627 aa7.03□□□□□ -1.28
VPS11-201ENST00000524454 TTPAP49638 278 aa7.03□□□□□ -1.28
VPS11-201ENST00000524454 SCNN1BP51168 640 aa7.03□□□□□ -1.28
VPS11-201ENST00000524454 MAXP61244 160 aa7.03□□□□□ -1.28
VPS11-201ENST00000524454 RHOAP61586 193 aa7.03□□□□□ -1.28
VPS11-201ENST00000524454 IRX1P78414 480 aaPredicted RBP7.03□□□□□ -1.28
VPS11-201ENST00000524454 TMPRSS15P98073 1019 aa7.03□□□□□ -1.28
VPS11-201ENST00000524454 NFKB2Q00653 900 aa7.03□□□□□ -1.28
VPS11-201ENST00000524454 RPL6Q02878 288 aaKnown RBP7.03□□□□□ -1.28
VPS11-201ENST00000524454 BST1Q10588 318 aa7.03□□□□□ -1.28
VPS11-201ENST00000524454 BNIP1Q12981 228 aa7.03□□□□□ -1.28
VPS11-201ENST00000524454 STX3Q13277 289 aa7.03□□□□□ -1.28
VPS11-201ENST00000524454 ENPP2Q13822 863 aa7.03□□□□□ -1.28
VPS11-201ENST00000524454 SEPT6Q14141 434 aa7.03□□□□□ -1.28
VPS11-201ENST00000524454 IHHQ14623 411 aa7.03□□□□□ -1.28
VPS11-201ENST00000524454 USP10Q14694 798 aaKnown RBP7.03□□□□□ -1.28
VPS11-201ENST00000524454 EIF4HQ15056 248 aaKnown RBP7.03□□□□□ -1.28
VPS11-201ENST00000524454 ACAP2Q15057 778 aa7.03□□□□□ -1.28
VPS11-201ENST00000524454 CHI3L2Q15782 390 aa7.03□□□□□ -1.28
VPS11-201ENST00000524454 PCSK7Q16549 785 aa7.03□□□□□ -1.28
VPS11-201ENST00000524454 RSPO4Q2I0M5 234 aaPredicted RBP7.03□□□□□ -1.28
VPS11-201ENST00000524454 FASTKD1Q53R41 847 aaKnown RBP7.03□□□□□ -1.28
VPS11-201ENST00000524454 AGAP9Q5VTM2 703 aa7.03□□□□□ -1.28
VPS11-201ENST00000524454 LYPLAL1Q5VWZ2 237 aa7.03□□□□□ -1.28
VPS11-201ENST00000524454 LIPMQ5VYY2 423 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms