RNA–Protein interactions for RNA: ENST00000524202.5

PTK2-255, Transcript of protein tyrosine kinase 2, human

TSL 1 (best)

Gene PTK2, Length 3,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTK2-255	ENST00000524202	TRAF2	Q12933	501 aa		8	□□□□□ -1.13
PTK2-255	ENST00000524202	RBBP5	Q15291	538 aa	Known RBP	8	□□□□□ -1.13
PTK2-255	ENST00000524202	TRIP4	Q15650	581 aa	Predicted RBP	8	□□□□□ -1.13
PTK2-255	ENST00000524202	LSR	Q86X29	649 aa	Predicted RBP	8	□□□□□ -1.13
PTK2-255	ENST00000524202	ARL14EP	Q8N8R7	260 aa	Predicted RBP	8	□□□□□ -1.13
PTK2-255	ENST00000524202	FBXO22	Q8NEZ5	403 aa		8	□□□□□ -1.13
PTK2-255	ENST00000524202	FBXO30	Q8TB52	745 aa		8	□□□□□ -1.13
PTK2-255	ENST00000524202	SNRNP27	Q8WVK2	155 aa	Known RBP	8	□□□□□ -1.13
PTK2-255	ENST00000524202	FIG4	Q92562	907 aa		8	□□□□□ -1.13
PTK2-255	ENST00000524202	SGCD	Q92629	289 aa		8	□□□□□ -1.13
PTK2-255	ENST00000524202	FUBP1	Q96AE4	644 aa	Known RBP	8	□□□□□ -1.13
PTK2-255	ENST00000524202	HIC2	Q96JB3	615 aa		8	□□□□□ -1.13
PTK2-255	ENST00000524202	MAEL	Q96JY0	434 aa	Known RBP	8	□□□□□ -1.13
PTK2-255	ENST00000524202	PLEKHG4B	Q96PX9	1271 aa		8	□□□□□ -1.13
PTK2-255	ENST00000524202	SH3GL3	Q99963	347 aa		8	□□□□□ -1.13
PTK2-255	ENST00000524202		Q9H521	79 aa		8	□□□□□ -1.13
PTK2-255	ENST00000524202	MYOF	Q9NZM1	2061 aa		8	□□□□□ -1.13
PTK2-255	ENST00000524202	DICER1	Q9UPY3	1922 aa	Known RBP	8	□□□□□ -1.13
PTK2-255	ENST00000524202	CHD9	Q3L8U1	2897 aa		8	□□□□□ -1.13
PTK2-255	ENST00000524202	DHRS12	A0PJE2	317 aa		8	□□□□□ -1.13
PTK2-255	ENST00000524202	C2orf81	A6NN90	581 aa		8	□□□□□ -1.13
PTK2-255	ENST00000524202	SLC38A8	A6NNN8	435 aa		8	□□□□□ -1.13
PTK2-255	ENST00000524202	AP3B1	O00203	1094 aa		8	□□□□□ -1.13
PTK2-255	ENST00000524202	MAGEB3	O15480	346 aa		8	□□□□□ -1.13
PTK2-255	ENST00000524202	OAZ2	O95190	189 aa		8	□□□□□ -1.13
PTK2-255	ENST00000524202	PRL	P01236	227 aa		8	□□□□□ -1.13
PTK2-255	ENST00000524202	G6PD	P11413	515 aa		8	□□□□□ -1.13
PTK2-255	ENST00000524202	SLC6A2	P23975	617 aa		8	□□□□□ -1.13
PTK2-255	ENST00000524202	HOXC13	P31276	330 aa		8	□□□□□ -1.13
PTK2-255	ENST00000524202	GSS	P48637	474 aa		8	□□□□□ -1.13
PTK2-255	ENST00000524202	INHBC	P55103	352 aa		8	□□□□□ -1.13
PTK2-255	ENST00000524202	RHD	Q02161	417 aa		8	□□□□□ -1.13
PTK2-255	ENST00000524202	IL10RB	Q08334	325 aa		8	□□□□□ -1.13
PTK2-255	ENST00000524202	CPSF6	Q16630	551 aa	Known RBP eCLIP	8	□□□□□ -1.13
PTK2-255	ENST00000524202	ANKS6	Q68DC2	871 aa		8	□□□□□ -1.13
PTK2-255	ENST00000524202	PTRHD1	Q6GMV3	140 aa	Known RBP	8	□□□□□ -1.13
PTK2-255	ENST00000524202	LETMD1	Q6P1Q0	360 aa		8	□□□□□ -1.13
PTK2-255	ENST00000524202	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	8	□□□□□ -1.13	2e-14	■■■■■ 57
PTK2-255	ENST00000524202	SETD3	Q86TU7	594 aa	Predicted RBP	8	□□□□□ -1.13
PTK2-255	ENST00000524202	GPSM1	Q86YR5	675 aa		8	□□□□□ -1.13
PTK2-255	ENST00000524202	SLC22A9	Q8IVM8	553 aa		8	□□□□□ -1.13
PTK2-255	ENST00000524202	CMTR2	Q8IYT2	770 aa	Known RBP	8	□□□□□ -1.13
PTK2-255	ENST00000524202	PHACTR4	Q8IZ21	702 aa		8	□□□□□ -1.13
PTK2-255	ENST00000524202	TSPAN14	Q8NG11	270 aa		8	□□□□□ -1.13
PTK2-255	ENST00000524202	LRRC58	Q96CX6	371 aa		8	□□□□□ -1.13
PTK2-255	ENST00000524202	EID2B	Q96D98	161 aa		8	□□□□□ -1.13
PTK2-255	ENST00000524202	ATOH8	Q96SQ7	321 aa		8	□□□□□ -1.13
PTK2-255	ENST00000524202	AARSD1	Q9BTE6	412 aa	Known RBP	8	□□□□□ -1.13
PTK2-255	ENST00000524202	CIPC	Q9C0C6	399 aa		8	□□□□□ -1.13
PTK2-255	ENST00000524202	POLR3H	Q9Y535	204 aa	Predicted RBP	8	□□□□□ -1.13
PTK2-255	ENST00000524202	CFAP54	Q96N23	3096 aa		8	□□□□□ -1.13
PTK2-255	ENST00000524202	LOC285095	A0A1B0GVY8	99 aa		8	□□□□□ -1.13
PTK2-255	ENST00000524202	PRRG1	O14668	218 aa		8	□□□□□ -1.13
PTK2-255	ENST00000524202	ARPC2	O15144	300 aa		8	□□□□□ -1.13
PTK2-255	ENST00000524202	NOBOX	O60393	691 aa		8	□□□□□ -1.13
PTK2-255	ENST00000524202	ACSL4	O60488	711 aa		8	□□□□□ -1.13
PTK2-255	ENST00000524202	RSL1D1	O76021	490 aa	Known RBP	8	□□□□□ -1.13
PTK2-255	ENST00000524202	TMCC1	O94876	653 aa		8	□□□□□ -1.13
PTK2-255	ENST00000524202	CLDN7	O95471	211 aa		8	□□□□□ -1.13
PTK2-255	ENST00000524202	SNAP29	O95721	258 aa		8	□□□□□ -1.13
PTK2-255	ENST00000524202	NDST3	O95803	873 aa		8	□□□□□ -1.13
PTK2-255	ENST00000524202	ATP5B	P06576	529 aa	Known RBP	8	□□□□□ -1.13
PTK2-255	ENST00000524202	MBL2	P11226	248 aa	Predicted RBP	8	□□□□□ -1.13
PTK2-255	ENST00000524202	SLC2A4	P14672	509 aa		8	□□□□□ -1.13
PTK2-255	ENST00000524202	LBP	P18428	481 aa		8	□□□□□ -1.13
PTK2-255	ENST00000524202	FDXR	P22570	491 aa		8	□□□□□ -1.13
PTK2-255	ENST00000524202	PRKACG	P22612	351 aa		8	□□□□□ -1.13
PTK2-255	ENST00000524202	IL12A	P29459	219 aa		8	□□□□□ -1.13
PTK2-255	ENST00000524202	ALDH7A1	P49419	539 aa	Known RBP	8	□□□□□ -1.13
PTK2-255	ENST00000524202	STK19	P49842	368 aa	Predicted RBP	8	□□□□□ -1.13
PTK2-255	ENST00000524202	KCNK10	P57789	538 aa		8	□□□□□ -1.13
PTK2-255	ENST00000524202	RHOA	P61586	193 aa		8	□□□□□ -1.13
PTK2-255	ENST00000524202	SMAD3	P84022	425 aa	Known RBP	8	□□□□□ -1.13
PTK2-255	ENST00000524202	LIPE	Q05469	1076 aa		8	□□□□□ -1.13
PTK2-255	ENST00000524202	CBLB	Q13191	982 aa		8	□□□□□ -1.13
PTK2-255	ENST00000524202	ARHGEF7	Q14155	803 aa		8	□□□□□ -1.13
PTK2-255	ENST00000524202	GTDC1	Q4AE62	458 aa		8	□□□□□ -1.13
PTK2-255	ENST00000524202	RFTN2	Q52LD8	501 aa	Predicted RBP	8	□□□□□ -1.13
PTK2-255	ENST00000524202	AFMID	Q63HM1	303 aa		8	□□□□□ -1.13
PTK2-255	ENST00000524202	KIAA0408	Q6ZU52	694 aa		8	□□□□□ -1.13
PTK2-255	ENST00000524202	ADGRG2	Q8IZP9	1017 aa		8	□□□□□ -1.13
PTK2-255	ENST00000524202	FAM86B1	Q8N7N1	296 aa		8	□□□□□ -1.13
PTK2-255	ENST00000524202	ZNF366	Q8N895	744 aa		8	□□□□□ -1.13
PTK2-255	ENST00000524202	PCYOX1L	Q8NBM8	494 aa		8	□□□□□ -1.13
PTK2-255	ENST00000524202	STAG3L4	Q8TBR4	150 aa		8	□□□□□ -1.13
PTK2-255	ENST00000524202	LKAAEAR1	Q8TD35	194 aa		8	□□□□□ -1.13
PTK2-255	ENST00000524202	RANBP9	Q96S59	729 aa		8	□□□□□ -1.13
PTK2-255	ENST00000524202	THUMPD3	Q9BV44	507 aa	Known RBP	8	□□□□□ -1.13
PTK2-255	ENST00000524202	ALG2	Q9H553	416 aa		8	□□□□□ -1.13
PTK2-255	ENST00000524202	SMOX	Q9NWM0	555 aa		8	□□□□□ -1.13
PTK2-255	ENST00000524202	MARCH5	Q9NX47	278 aa		8	□□□□□ -1.13
PTK2-255	ENST00000524202	TDRD15	B5MCY1	1934 aa	Known RBP	8	□□□□□ -1.13
PTK2-255	ENST00000524202	SDK1	Q7Z5N4	2213 aa		7.99	□□□□□ -1.13
PTK2-255	ENST00000524202	ZFC3H1	O60293	1989 aa	Known RBP	7.99	□□□□□ -1.13
PTK2-255	ENST00000524202	GREB1	Q4ZG55	1949 aa		7.99	□□□□□ -1.13
PTK2-255	ENST00000524202	C1orf232	A0A0U1RR37	186 aa		7.99	□□□□□ -1.13
PTK2-255	ENST00000524202	CCDC154	A6NI56	674 aa		7.99	□□□□□ -1.13
PTK2-255	ENST00000524202	ANKRD66	B4E2M5	251 aa		7.99	□□□□□ -1.13
PTK2-255	ENST00000524202	CYBB	P04839	570 aa		7.99	□□□□□ -1.13
PTK2-255	ENST00000524202	RANBP1	P43487	201 aa		7.99	□□□□□ -1.13

Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms