RNA–Protein interactions for RNA: ENST00000523237.1

CLN8-206, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 835 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-206ENST00000523237 VPS35Q96QK1 796 aa16.04■□□□□ 0.16
CLN8-206ENST00000523237 OSBPL8Q9BZF1 889 aa16.04■□□□□ 0.16
CLN8-206ENST00000523237 BPIFA1Q9NP55 256 aa16.04■□□□□ 0.16
CLN8-206ENST00000523237 ACSL6Q9UKU0 697 aa16.04■□□□□ 0.16
CLN8-206ENST00000523237 ADGRG1Q9Y653 693 aa16.04■□□□□ 0.16
CLN8-206ENST00000523237 LOC400499M0QZD8 3231 aa16.03■□□□□ 0.16
CLN8-206ENST00000523237 IGHV5-10-1A0A0J9YXX1 117 aa16.03■□□□□ 0.16
CLN8-206ENST00000523237 OR5K4A6NMS3 321 aa16.03■□□□□ 0.16
CLN8-206ENST00000523237 EIF4E1BA6NMX2 242 aaKnown RBP16.03■□□□□ 0.16
CLN8-206ENST00000523237 CHUKO15111 745 aa16.03■□□□□ 0.16
CLN8-206ENST00000523237 VEGFDO43915 354 aa16.03■□□□□ 0.16
CLN8-206ENST00000523237 SNX2O60749 519 aa16.03■□□□□ 0.16
CLN8-206ENST00000523237 ANXA9O76027 345 aa16.03■□□□□ 0.16
CLN8-206ENST00000523237 F3P13726 295 aa16.03■□□□□ 0.16
CLN8-206ENST00000523237 CHRNA4P43681 627 aa16.03■□□□□ 0.16
CLN8-206ENST00000523237 PPM1FP49593 454 aaPredicted RBP16.03■□□□□ 0.16
CLN8-206ENST00000523237 CLCNKAP51800 687 aa16.03■□□□□ 0.16
CLN8-206ENST00000523237 LIMK2P53671 638 aa16.03■□□□□ 0.16
CLN8-206ENST00000523237 GEMP55040 296 aa16.03■□□□□ 0.16
CLN8-206ENST00000523237 OTUD4Q01804 1114 aaKnown RBP16.03■□□□□ 0.16
CLN8-206ENST00000523237 TRA2AQ13595 282 aaKnown RBP eCLIP16.03■□□□□ 0.16
CLN8-206ENST00000523237 C16orf72Q14CZ0 275 aa16.03■□□□□ 0.16
CLN8-206ENST00000523237 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.03■□□□□ 0.16
CLN8-206ENST00000523237 ZNF648Q5T619 568 aaPredicted RBP16.03■□□□□ 0.16
CLN8-206ENST00000523237 NKAIN2Q5VXU1 208 aa16.03■□□□□ 0.16
CLN8-206ENST00000523237 CRTC3Q6UUV7 619 aa16.03■□□□□ 0.16
CLN8-206ENST00000523237 ZNF574Q6ZN55 896 aaPredicted RBP16.03■□□□□ 0.16
CLN8-206ENST00000523237 GLT6D1Q7Z4J2 308 aa16.03■□□□□ 0.16
CLN8-206ENST00000523237 SLC9B2Q86UD5 537 aa16.03■□□□□ 0.16
CLN8-206ENST00000523237 CDKL3Q8IVW4 592 aaPredicted RBP16.03■□□□□ 0.16
CLN8-206ENST00000523237 TTC30BQ8N4P2 665 aa16.03■□□□□ 0.16
CLN8-206ENST00000523237 LRRC57Q8N9N7 239 aa16.03■□□□□ 0.16
CLN8-206ENST00000523237 AVL9Q8NBF6 648 aa16.03■□□□□ 0.16
CLN8-206ENST00000523237 OR10G6Q8NH81 332 aa16.03■□□□□ 0.16
CLN8-206ENST00000523237 BLOC1S5Q8TDH9 187 aa16.03■□□□□ 0.16
CLN8-206ENST00000523237 SH3KBP1Q96B97 665 aa16.03■□□□□ 0.16
CLN8-206ENST00000523237 CCDC74BQ96LY2 380 aa16.03■□□□□ 0.16
CLN8-206ENST00000523237 BBC3Q96PG8 261 aaPredicted RBP16.03■□□□□ 0.16
CLN8-206ENST00000523237 ZMYND15Q9H091 742 aa16.03■□□□□ 0.16
CLN8-206ENST00000523237 GBA3Q9H227 469 aa16.03■□□□□ 0.16
CLN8-206ENST00000523237 OSGEPL1Q9H4B0 414 aa16.03■□□□□ 0.16
CLN8-206ENST00000523237 CPNE5Q9HCH3 593 aa16.03■□□□□ 0.16
CLN8-206ENST00000523237 SARS2Q9NP81 518 aaKnown RBP16.03■□□□□ 0.16
CLN8-206ENST00000523237 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.03■□□□□ 0.16
CLN8-206ENST00000523237 IMPACTQ9P2X3 320 aa16.03■□□□□ 0.16
CLN8-206ENST00000523237 SSUH2Q9Y2M2 353 aa16.03■□□□□ 0.16
CLN8-206ENST00000523237 KIR2DS5A0A0G2JLQ3 304 aa16.02■□□□□ 0.16
CLN8-206ENST00000523237 A0A0G2JNG1 304 aa16.02■□□□□ 0.16
CLN8-206ENST00000523237 GRID2IPA4D2P6 1211 aa16.02■□□□□ 0.16
CLN8-206ENST00000523237 A6NCN8 305 aa16.02■□□□□ 0.16
CLN8-206ENST00000523237 KIR2DS3K7RE56 304 aa16.02■□□□□ 0.16
CLN8-206ENST00000523237 KMOO15229 486 aa16.02■□□□□ 0.16
CLN8-206ENST00000523237 DUX1O43812 170 aa16.02■□□□□ 0.16
CLN8-206ENST00000523237 MTX2O75431 263 aa16.02■□□□□ 0.16
CLN8-206ENST00000523237 STK10O94804 968 aaKnown RBP16.02■□□□□ 0.16
CLN8-206ENST00000523237 CDK14O94921 469 aa16.02■□□□□ 0.16
CLN8-206ENST00000523237 TJP3O95049 919 aa16.02■□□□□ 0.16
CLN8-206ENST00000523237 RBP3P10745 1247 aa16.02■□□□□ 0.16
CLN8-206ENST00000523237 CSF2RBP32927 897 aa16.02■□□□□ 0.16
CLN8-206ENST00000523237 SPAM1P38567 509 aa16.02■□□□□ 0.16
CLN8-206ENST00000523237 MAPK10P53779 464 aa16.02■□□□□ 0.16
CLN8-206ENST00000523237 EIF3EP60228 445 aaKnown RBP16.02■□□□□ 0.16
CLN8-206ENST00000523237 VAC14Q08AM6 782 aa16.02■□□□□ 0.16
CLN8-206ENST00000523237 CLN3Q13286 438 aa16.02■□□□□ 0.16
CLN8-206ENST00000523237 KIR2DS5Q14953 304 aa16.02■□□□□ 0.16
CLN8-206ENST00000523237 INSCQ1MX18 579 aa16.02■□□□□ 0.16
CLN8-206ENST00000523237 ATP13A5Q4VNC0 1218 aa16.02■□□□□ 0.16
CLN8-206ENST00000523237 ARHGAP40Q5TG30 622 aa16.02■□□□□ 0.16
CLN8-206ENST00000523237 TMEM164Q5U3C3 297 aa16.02■□□□□ 0.16
CLN8-206ENST00000523237 LRRTM4Q86VH4 590 aa16.02■□□□□ 0.16
CLN8-206ENST00000523237 ZNF761Q86XN6 746 aaPredicted RBP16.02■□□□□ 0.16
CLN8-206ENST00000523237 RCBTB1Q8NDN9 531 aa16.02■□□□□ 0.16
CLN8-206ENST00000523237 DTX3LQ8TDB6 740 aa16.02■□□□□ 0.16
CLN8-206ENST00000523237 ALG3Q92685 438 aa16.02■□□□□ 0.16
CLN8-206ENST00000523237 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.02■□□□□ 0.16
CLN8-206ENST00000523237 C10orf88Q9H8K7 445 aa16.02■□□□□ 0.16
CLN8-206ENST00000523237 KLC4Q9NSK0 619 aa16.02■□□□□ 0.16
CLN8-206ENST00000523237 AMFRQ9UKV5 643 aa16.02■□□□□ 0.16
CLN8-206ENST00000523237 PKP3Q9Y446 797 aa16.02■□□□□ 0.16
CLN8-206ENST00000523237 ZNF106Q9H2Y7 1883 aaKnown RBP16.01■□□□□ 0.15
CLN8-206ENST00000523237 PRAMEF33A0A0G2JMD5 474 aa16.01■□□□□ 0.15
CLN8-206ENST00000523237 PRAMEF10O60809 474 aa16.01■□□□□ 0.15
CLN8-206ENST00000523237 PPFIA2O75334 1257 aa16.01■□□□□ 0.15
CLN8-206ENST00000523237 ZNF189O75820 626 aaPredicted RBP16.01■□□□□ 0.15
CLN8-206ENST00000523237 PYGMP11217 842 aa16.01■□□□□ 0.15
CLN8-206ENST00000523237 ZNF7P17097 686 aaPredicted RBP16.01■□□□□ 0.15
CLN8-206ENST00000523237 ETV5P41161 510 aa16.01■□□□□ 0.15
CLN8-206ENST00000523237 CFHR1Q03591 330 aa16.01■□□□□ 0.15
CLN8-206ENST00000523237 KIF5AQ12840 1032 aa16.01■□□□□ 0.15
CLN8-206ENST00000523237 NFATC2Q13469 925 aa16.01■□□□□ 0.15
CLN8-206ENST00000523237 GTF2H3Q13889 308 aa16.01■□□□□ 0.15
CLN8-206ENST00000523237 PLA2G4EQ3MJ16 856 aa16.01■□□□□ 0.15
CLN8-206ENST00000523237 TMEM71Q6P5X7 295 aa16.01■□□□□ 0.15
CLN8-206ENST00000523237 DARS2Q6PI48 645 aaKnown RBP16.01■□□□□ 0.15
CLN8-206ENST00000523237 PEX26Q7Z412 305 aa16.01■□□□□ 0.15
CLN8-206ENST00000523237 TMEM139Q8IV31 216 aa16.01■□□□□ 0.15
CLN8-206ENST00000523237 SYCE1Q8N0S2 351 aa16.01■□□□□ 0.15
CLN8-206ENST00000523237 UBL4BQ8N7F7 174 aa16.01■□□□□ 0.15
CLN8-206ENST00000523237 GDAP1Q8TB36 358 aa16.01■□□□□ 0.15
CLN8-206ENST00000523237 BRSK1Q8TDC3 778 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms