RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 DENND6BQ8NEG7 585 aa11.83□□□□□ -0.52
PVT1-215ENST00000522963 DEFB124Q8NES8 71 aa11.83□□□□□ -0.52
PVT1-215ENST00000522963 OR13H1Q8NG92 308 aa11.83□□□□□ -0.52
PVT1-215ENST00000522963 OR4L1Q8NH43 312 aa11.83□□□□□ -0.52
PVT1-215ENST00000522963 UHMK1Q8TAS1 419 aaKnown RBP11.83□□□□□ -0.52
PVT1-215ENST00000522963 ZNF398Q8TD17 642 aa11.83□□□□□ -0.52
PVT1-215ENST00000522963 DTX3LQ8TDB6 740 aa11.83□□□□□ -0.52
PVT1-215ENST00000522963 FBF1Q8TES7 1133 aa11.83□□□□□ -0.52
PVT1-215ENST00000522963 SETD7Q8WTS6 366 aaKnown RBP11.83□□□□□ -0.52
PVT1-215ENST00000522963 CERS2Q96G23 380 aa11.83□□□□□ -0.52
PVT1-215ENST00000522963 SGSM3Q96HU1 749 aa11.83□□□□□ -0.52
PVT1-215ENST00000522963 ZSCAN5AQ9BUG6 496 aa11.83□□□□□ -0.52
PVT1-215ENST00000522963 ASB8Q9H765 288 aa11.83□□□□□ -0.52
PVT1-215ENST00000522963 SMYD2Q9NRG4 433 aa11.83□□□□□ -0.52
PVT1-215ENST00000522963 TM7SF3Q9NS93 570 aa11.83□□□□□ -0.52
PVT1-215ENST00000522963 DNAAF2Q9NVR5 837 aaKnown RBP11.83□□□□□ -0.52
PVT1-215ENST00000522963 TMPRSS11EQ9UL52 423 aa11.83□□□□□ -0.52
PVT1-215ENST00000522963 MYLKQ15746 1914 aa11.83□□□□□ -0.52
PVT1-215ENST00000522963 TRBV5-4A0A0C4DH59 114 aa11.82□□□□□ -0.52
PVT1-215ENST00000522963 A6NNZ2 444 aa11.82□□□□□ -0.52
PVT1-215ENST00000522963 ERLIN1O75477 346 aa11.82□□□□□ -0.52
PVT1-215ENST00000522963 SPAG6O75602 509 aa11.82□□□□□ -0.52
PVT1-215ENST00000522963 PIAS1O75925 651 aa11.82□□□□□ -0.52
PVT1-215ENST00000522963 STX2P32856 288 aa11.82□□□□□ -0.52
PVT1-215ENST00000522963 HSD17B3P37058 310 aa11.82□□□□□ -0.52
PVT1-215ENST00000522963 CCT8P50990 548 aa11.82□□□□□ -0.52
PVT1-215ENST00000522963 NOVA1P51513 510 aaKnown RBP11.82□□□□□ -0.52
PVT1-215ENST00000522963 NXPH1P58417 271 aa11.82□□□□□ -0.52
PVT1-215ENST00000522963 MGAT5Q09328 741 aa11.82□□□□□ -0.52
PVT1-215ENST00000522963 THOC5Q13769 683 aaKnown RBP11.82□□□□□ -0.52
PVT1-215ENST00000522963 SEMA3AQ14563 771 aa11.82□□□□□ -0.52
PVT1-215ENST00000522963 INPP5AQ14642 412 aa11.82□□□□□ -0.52
PVT1-215ENST00000522963 ADAMTSL4Q6UY14 1074 aa11.82□□□□□ -0.52
PVT1-215ENST00000522963 CYS1Q717R9 158 aa11.82□□□□□ -0.52
PVT1-215ENST00000522963 LDB1Q86U70 411 aaPredicted RBP11.82□□□□□ -0.52
PVT1-215ENST00000522963 SPATS2Q86XZ4 545 aaKnown RBP11.82□□□□□ -0.52
PVT1-215ENST00000522963 GATAD2AQ86YP4 633 aa11.82□□□□□ -0.52
PVT1-215ENST00000522963 TMEM145Q8NBT3 493 aa11.82□□□□□ -0.52
PVT1-215ENST00000522963 UBLCP1Q8WVY7 318 aaPredicted RBP11.82□□□□□ -0.52
PVT1-215ENST00000522963 BMFQ96LC9 184 aa11.82□□□□□ -0.52
PVT1-215ENST00000522963 FUT8Q9BYC5 575 aa11.82□□□□□ -0.52
PVT1-215ENST00000522963 PPANQ9NQ55 473 aaKnown RBP11.82□□□□□ -0.52
PVT1-215ENST00000522963 IARS2Q9NSE4 1012 aaKnown RBP11.82□□□□□ -0.52
PVT1-215ENST00000522963 CATSPERZQ9NTU4 200 aa11.82□□□□□ -0.52
PVT1-215ENST00000522963 SLC17A6Q9P2U8 582 aa11.82□□□□□ -0.52
PVT1-215ENST00000522963 CRLS1Q9UJA2 301 aa11.82□□□□□ -0.52
PVT1-215ENST00000522963 CNOT6Q9ULM6 557 aaKnown RBP11.82□□□□□ -0.52
PVT1-215ENST00000522963 HS3ST3A1Q9Y663 406 aa11.82□□□□□ -0.52
PVT1-215ENST00000522963 FAM159BA6NKW6 160 aa11.81□□□□□ -0.52
PVT1-215ENST00000522963 AGAP14A8MT82 685 aa11.81□□□□□ -0.52
PVT1-215ENST00000522963 CXorf49A8MYA2 514 aaPredicted RBP11.81□□□□□ -0.52
PVT1-215ENST00000522963 GIPC1O14908 333 aa11.81□□□□□ -0.52
PVT1-215ENST00000522963 INPP4BO15327 924 aa11.81□□□□□ -0.52
PVT1-215ENST00000522963 CD3EAPO15446 510 aaKnown RBP11.81□□□□□ -0.52
PVT1-215ENST00000522963 SH3BP5O60239 455 aa11.81□□□□□ -0.52
PVT1-215ENST00000522963 SDC3O75056 442 aa11.81□□□□□ -0.52
PVT1-215ENST00000522963 PYGLP06737 847 aa11.81□□□□□ -0.52
PVT1-215ENST00000522963 F7P08709 466 aaPredicted RBP11.81□□□□□ -0.52
PVT1-215ENST00000522963 ABHD2P08910 425 aa11.81□□□□□ -0.52
PVT1-215ENST00000522963 CD59P13987 128 aa11.81□□□□□ -0.52
PVT1-215ENST00000522963 H2AFXP16104 143 aaPredicted RBP11.81□□□□□ -0.52
PVT1-215ENST00000522963 TEAD1P28347 426 aa11.81□□□□□ -0.52
PVT1-215ENST00000522963 PHBP35232 272 aa11.81□□□□□ -0.52
PVT1-215ENST00000522963 TRIM23P36406 574 aa11.81□□□□□ -0.52
PVT1-215ENST00000522963 ARRB1P49407 418 aaPredicted RBP11.81□□□□□ -0.52
PVT1-215ENST00000522963 OVGP1Q12889 678 aa11.81□□□□□ -0.52
PVT1-215ENST00000522963 ITGA9Q13797 1035 aa11.81□□□□□ -0.52
PVT1-215ENST00000522963 PDE1CQ14123 709 aaPredicted RBP11.81□□□□□ -0.52
PVT1-215ENST00000522963 SLC29A2Q14542 456 aa11.81□□□□□ -0.52
PVT1-215ENST00000522963 SUZ12Q15022 739 aaKnown RBP11.81□□□□□ -0.52
PVT1-215ENST00000522963 EFTUD2Q15029 972 aaKnown RBP eCLIP11.81□□□□□ -0.52
PVT1-215ENST00000522963 DBN1Q16643 649 aa11.81□□□□□ -0.52
PVT1-215ENST00000522963 ZNF423Q2M1K9 1284 aa11.81□□□□□ -0.52
PVT1-215ENST00000522963 KBTBD12Q3ZCT8 623 aa11.81□□□□□ -0.52
PVT1-215ENST00000522963 GPR33Q49SQ1 333 aa11.81□□□□□ -0.52
PVT1-215ENST00000522963 FASTKD1Q53R41 847 aaKnown RBP11.81□□□□□ -0.52
PVT1-215ENST00000522963 ZNF542PQ5EBM4 170 aa11.81□□□□□ -0.52
PVT1-215ENST00000522963 PPM1JQ5JR12 505 aa11.81□□□□□ -0.52
PVT1-215ENST00000522963 BEND6Q5SZJ8 279 aaPredicted RBP11.81□□□□□ -0.52
PVT1-215ENST00000522963 TEDDM1Q5T9Z0 273 aa11.81□□□□□ -0.52
PVT1-215ENST00000522963 ZNF470Q6ECI4 717 aa11.81□□□□□ -0.52
PVT1-215ENST00000522963 ZNF449Q6P9G9 518 aa11.81□□□□□ -0.52
PVT1-215ENST00000522963 TAS2R42Q7RTR8 314 aa11.81□□□□□ -0.52
PVT1-215ENST00000522963 IQCHQ86VS3 1027 aa11.81□□□□□ -0.52
PVT1-215ENST00000522963 SERPINA9Q86WD7 417 aa11.81□□□□□ -0.52
PVT1-215ENST00000522963 DENND6AQ8IWF6 608 aa11.81□□□□□ -0.52
PVT1-215ENST00000522963 CNTN4Q8IWV2 1026 aa11.81□□□□□ -0.52
PVT1-215ENST00000522963 MREGQ8N565 214 aa11.81□□□□□ -0.52
PVT1-215ENST00000522963 OTUD6BQ8N6M0 293 aa11.81□□□□□ -0.52
PVT1-215ENST00000522963 GPR150Q8NGU9 434 aa11.81□□□□□ -0.52
PVT1-215ENST00000522963 BTN2A2Q8WVV5 523 aa11.81□□□□□ -0.52
PVT1-215ENST00000522963 HNRNPLLQ8WVV9 542 aaKnown RBP11.81□□□□□ -0.52
PVT1-215ENST00000522963 GLYATL1Q969I3 302 aa11.81□□□□□ -0.52
PVT1-215ENST00000522963 ULK4Q96C45 1275 aa11.81□□□□□ -0.52
PVT1-215ENST00000522963 CCDC97Q96F63 343 aaPredicted RBP11.81□□□□□ -0.52
PVT1-215ENST00000522963 CAMK1GQ96NX5 476 aa11.81□□□□□ -0.52
PVT1-215ENST00000522963 VPS35Q96QK1 796 aa11.81□□□□□ -0.52
PVT1-215ENST00000522963 ELF4Q99607 663 aaPredicted RBP11.81□□□□□ -0.52
PVT1-215ENST00000522963 FAM167BQ9BTA0 163 aa11.81□□□□□ -0.52
PVT1-215ENST00000522963 SLC32A1Q9H598 525 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms