RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 C1orf185Q5T7R7 199 aa4□□□□□ -1.77
SKP1-209ENST00000522552 EFCAB12Q6NXP0 572 aa4□□□□□ -1.77
SKP1-209ENST00000522552 PODNL1Q6PEZ8 512 aa4□□□□□ -1.77
SKP1-209ENST00000522552 CLEC2AQ6UVW9 174 aa4□□□□□ -1.77
SKP1-209ENST00000522552 TSPAN33Q86UF1 283 aa4□□□□□ -1.77
SKP1-209ENST00000522552 CUZD1Q86UP6 607 aa4□□□□□ -1.77
SKP1-209ENST00000522552 BBS5Q8N3I7 341 aa4□□□□□ -1.77
SKP1-209ENST00000522552 SRFBP1Q8NEF9 429 aaKnown RBP4□□□□□ -1.77
SKP1-209ENST00000522552 NUDT10Q8NFP7 164 aa4□□□□□ -1.77
SKP1-209ENST00000522552 CAGE1Q8TC20 777 aa4□□□□□ -1.77
SKP1-209ENST00000522552 SELENOMQ8WWX9 145 aa4□□□□□ -1.77
SKP1-209ENST00000522552 NSMAFQ92636 917 aa4□□□□□ -1.77
SKP1-209ENST00000522552 RABGGTAQ92696 567 aa4□□□□□ -1.77
SKP1-209ENST00000522552 MOAP1Q96BY2 351 aa4□□□□□ -1.77
SKP1-209ENST00000522552 NUDT11Q96G61 164 aa4□□□□□ -1.77
SKP1-209ENST00000522552 TTC25Q96NG3 672 aa4□□□□□ -1.77
SKP1-209ENST00000522552 BCL7BQ9BQE9 202 aa4□□□□□ -1.77
SKP1-209ENST00000522552 CADM1Q9BY67 442 aaKnown RBP4□□□□□ -1.77
SKP1-209ENST00000522552 SLC7A5P2Q9GIP4 190 aa4□□□□□ -1.77
SKP1-209ENST00000522552 CARD9Q9H257 536 aa4□□□□□ -1.77
SKP1-209ENST00000522552 PPIL3Q9H2H8 161 aaKnown RBP4□□□□□ -1.77
SKP1-209ENST00000522552 KCNK15Q9H427 330 aa4□□□□□ -1.77
SKP1-209ENST00000522552 VCPKMTQ9H867 229 aa4□□□□□ -1.77
SKP1-209ENST00000522552 LRRC40Q9H9A6 602 aa4□□□□□ -1.77
SKP1-209ENST00000522552 ZNF304Q9HCX3 659 aa4□□□□□ -1.77
SKP1-209ENST00000522552 RPRD1BQ9NQG5 326 aaKnown RBP4□□□□□ -1.77
SKP1-209ENST00000522552 C19orf73Q9NVV2 129 aa4□□□□□ -1.77
SKP1-209ENST00000522552 TMEM161AQ9NX61 479 aa4□□□□□ -1.77
SKP1-209ENST00000522552 GDAP2Q9NXN4 497 aa4□□□□□ -1.77
SKP1-209ENST00000522552 OR6C3Q9NZP0 311 aa4□□□□□ -1.77
SKP1-209ENST00000522552 DNAJB4Q9UDY4 337 aa4□□□□□ -1.77
SKP1-209ENST00000522552 IPO11Q9UI26 975 aaKnown RBP4□□□□□ -1.77
SKP1-209ENST00000522552 MAD2L2Q9UI95 211 aa4□□□□□ -1.77
SKP1-209ENST00000522552 B3GNT3Q9Y2A9 372 aa4□□□□□ -1.77
SKP1-209ENST00000522552 FAM96BQ9Y3D0 163 aa4□□□□□ -1.77
SKP1-209ENST00000522552 MAU2Q9Y6X3 613 aa4□□□□□ -1.77
SKP1-209ENST00000522552 UTYO14607 1347 aa4□□□□□ -1.77
SKP1-209ENST00000522552 UBE4BO95155 1302 aa4□□□□□ -1.77
SKP1-209ENST00000522552 FAM230AA0A1W2PPH8 454 aa4□□□□□ -1.77
SKP1-209ENST00000522552 UBE2QL1A1L167 161 aa4□□□□□ -1.77
SKP1-209ENST00000522552 NCF1BA6NI72 391 aaPredicted RBP4□□□□□ -1.77
SKP1-209ENST00000522552 NCF1CA8MVU1 366 aaPredicted RBP4□□□□□ -1.77
SKP1-209ENST00000522552 F5H697 171 aa4□□□□□ -1.77
SKP1-209ENST00000522552 SSX5O60225 188 aa4□□□□□ -1.77
SKP1-209ENST00000522552 MOSPD3O75425 235 aa4□□□□□ -1.77
SKP1-209ENST00000522552 ERN1O75460 977 aaKnown RBP4□□□□□ -1.77
SKP1-209ENST00000522552 TOMM70O94826 608 aa4□□□□□ -1.77
SKP1-209ENST00000522552 HLA-DOAP06340 250 aa4□□□□□ -1.77
SKP1-209ENST00000522552 POLR2MP0CAP2 368 aa4□□□□□ -1.77
SKP1-209ENST00000522552 ZNF888P0CJ79 500 aaPredicted RBP4□□□□□ -1.77
SKP1-209ENST00000522552 CSF2RAP15509 400 aa4□□□□□ -1.77
SKP1-209ENST00000522552 LBPP18428 481 aa4□□□□□ -1.77
SKP1-209ENST00000522552 GNAT2P19087 354 aa4□□□□□ -1.77
SKP1-209ENST00000522552 MATN1P21941 496 aa4□□□□□ -1.77
SKP1-209ENST00000522552 TKTP29401 623 aaKnown RBP4□□□□□ -1.77
SKP1-209ENST00000522552 CORO1AP31146 461 aaKnown RBP4□□□□□ -1.77
SKP1-209ENST00000522552 ARHGAP25P42331 645 aa4□□□□□ -1.77
SKP1-209ENST00000522552 AGTR2P50052 363 aa4□□□□□ -1.77
SKP1-209ENST00000522552 ANXA11P50995 505 aaKnown RBP4□□□□□ -1.77
SKP1-209ENST00000522552 SRP54P61011 504 aaKnown RBP4□□□□□ -1.77
SKP1-209ENST00000522552 HNRNPKP61978 463 aaKnown RBP eCLIP4□□□□□ -1.77
SKP1-209ENST00000522552 SPIBQ01892 262 aa4□□□□□ -1.77
SKP1-209ENST00000522552 ABRQ12979 859 aa4□□□□□ -1.77
SKP1-209ENST00000522552 GRIK3Q13003 919 aa4□□□□□ -1.77
SKP1-209ENST00000522552 PDZK1IP1Q13113 114 aa4□□□□□ -1.77
SKP1-209ENST00000522552 GIT2Q14161 759 aa4□□□□□ -1.77
SKP1-209ENST00000522552 EFTUD2Q15029 972 aaKnown RBP eCLIP4□□□□□ -1.777e-8■■■□□ 18.5
SKP1-209ENST00000522552 ZMYND11Q15326 602 aa4□□□□□ -1.77
SKP1-209ENST00000522552 SHBQ15464 509 aa4□□□□□ -1.77
SKP1-209ENST00000522552 MAPK11Q15759 364 aa4□□□□□ -1.77
SKP1-209ENST00000522552 NADK2Q4G0N4 442 aa4□□□□□ -1.77
SKP1-209ENST00000522552 CCDC152Q4G0S7 254 aa4□□□□□ -1.77
SKP1-209ENST00000522552 CFAP157Q5JU67 520 aa4□□□□□ -1.77
SKP1-209ENST00000522552 AADACL4Q5VUY2 407 aa4□□□□□ -1.77
SKP1-209ENST00000522552 SULT1C3Q6IMI6 304 aa4□□□□□ -1.77
SKP1-209ENST00000522552 AADACL2Q6P093 401 aa4□□□□□ -1.77
SKP1-209ENST00000522552 KYAT3Q6YP21 454 aaKnown RBP4□□□□□ -1.77
SKP1-209ENST00000522552 DOK3Q7L591 496 aa4□□□□□ -1.77
SKP1-209ENST00000522552 CAMK1DQ8IU85 385 aa4□□□□□ -1.77
SKP1-209ENST00000522552 ELOA2Q8IYF1 753 aaPredicted RBP4□□□□□ -1.77
SKP1-209ENST00000522552 ARL14Q8N4G2 192 aa4□□□□□ -1.77
SKP1-209ENST00000522552 DCLK2Q8N568 766 aa4□□□□□ -1.77
SKP1-209ENST00000522552 NIPA2Q8N8Q9 360 aa4□□□□□ -1.77
SKP1-209ENST00000522552 OR14L1PQ8NHC6 308 aa4□□□□□ -1.77
SKP1-209ENST00000522552 SLC9A6Q92581 669 aa4□□□□□ -1.77
SKP1-209ENST00000522552 CTHRC1Q96CG8 243 aa4□□□□□ -1.77
SKP1-209ENST00000522552 AP2M1Q96CW1 435 aa4□□□□□ -1.77
SKP1-209ENST00000522552 SSX3Q99909 188 aa4□□□□□ -1.77
SKP1-209ENST00000522552 ASCL2Q99929 193 aa4□□□□□ -1.77
SKP1-209ENST00000522552 C11orf84Q9BUA3 381 aaPredicted RBP4□□□□□ -1.77
SKP1-209ENST00000522552 EHD1Q9H4M9 534 aa4□□□□□ -1.77
SKP1-209ENST00000522552 FANCEQ9HB96 536 aa4□□□□□ -1.77
SKP1-209ENST00000522552 PRDM7Q9NQW5 492 aa4□□□□□ -1.77
SKP1-209ENST00000522552 LARSQ9P2J5 1176 aaKnown RBP4□□□□□ -1.77
SKP1-209ENST00000522552 BAIAP2L1Q9UHR4 511 aa4□□□□□ -1.77
SKP1-209ENST00000522552 ADAMTS6Q9UKP5 1117 aa4□□□□□ -1.77
SKP1-209ENST00000522552 SPACA6W5XKT8 324 aa4□□□□□ -1.77
SKP1-209ENST00000522552 AATKQ6ZMQ8 1374 aa4□□□□□ -1.77
SKP1-209ENST00000522552 SPATA31A3Q5VYP0 1347 aa3.99□□□□□ -1.77
SKP1-209ENST00000522552 ARHGEF40Q8TER5 1519 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms