RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 TRAP1Q12931 704 aaKnown RBP13.73□□□□□ -0.21
SYNPO-205ENST00000522122 ABRQ12979 859 aa13.73□□□□□ -0.21
SYNPO-205ENST00000522122 TAB1Q15750 504 aa13.73□□□□□ -0.21
SYNPO-205ENST00000522122 CHADLQ6NUI6 762 aa13.73□□□□□ -0.21
SYNPO-205ENST00000522122 TAPT1Q6NXT6 567 aa13.73□□□□□ -0.21
SYNPO-205ENST00000522122 CERS6Q6ZMG9 384 aa13.73□□□□□ -0.21
SYNPO-205ENST00000522122 CDHR3Q6ZTQ4 885 aa13.73□□□□□ -0.21
SYNPO-205ENST00000522122 LRTOMTQ8WZ04 291 aa13.73□□□□□ -0.21
SYNPO-205ENST00000522122 ZNF558Q96NG5 402 aa13.73□□□□□ -0.21
SYNPO-205ENST00000522122 ABCG8Q9H221 673 aa13.73□□□□□ -0.21
SYNPO-205ENST00000522122 RRAGCQ9HB90 399 aa13.73□□□□□ -0.21
SYNPO-205ENST00000522122 GALNT8Q9NY28 637 aa13.73□□□□□ -0.21
SYNPO-205ENST00000522122 SAMD4AQ9UPU9 718 aaKnown RBP13.73□□□□□ -0.21
SYNPO-205ENST00000522122 YJEFN3A6XGL0 299 aa13.73□□□□□ -0.21
SYNPO-205ENST00000522122 XYLBO75191 536 aa13.73□□□□□ -0.21
SYNPO-205ENST00000522122 STX11O75558 287 aa13.73□□□□□ -0.21
SYNPO-205ENST00000522122 USP2O75604 605 aaPredicted RBP13.73□□□□□ -0.21
SYNPO-205ENST00000522122 CLCNKBP51801 687 aa13.73□□□□□ -0.21
SYNPO-205ENST00000522122 SMIM11AP58511 58 aa13.73□□□□□ -0.21
SYNPO-205ENST00000522122 IKBKEQ14164 716 aa13.73□□□□□ -0.21
SYNPO-205ENST00000522122 TARBP2Q15633 366 aaKnown RBP13.73□□□□□ -0.21
SYNPO-205ENST00000522122 TRIM40Q6P9F5 258 aa13.73□□□□□ -0.21
SYNPO-205ENST00000522122 THAP5Q7Z6K1 395 aa13.73□□□□□ -0.21
SYNPO-205ENST00000522122 FAM156AQ8NDB6 213 aa13.73□□□□□ -0.21
SYNPO-205ENST00000522122 CLEC4CQ8WTT0 213 aa13.73□□□□□ -0.21
SYNPO-205ENST00000522122 TRIM63Q969Q1 353 aa13.73□□□□□ -0.21
SYNPO-205ENST00000522122 OSBPL10Q9BXB5 764 aa13.73□□□□□ -0.21
SYNPO-205ENST00000522122 TDRD1Q9BXT4 1180 aaKnown RBP13.73□□□□□ -0.21
SYNPO-205ENST00000522122 VPS4AQ9UN37 437 aa13.73□□□□□ -0.21
SYNPO-205ENST00000522122 WBP4O75554 376 aaKnown RBP13.73□□□□□ -0.21
SYNPO-205ENST00000522122 PBX3P40426 434 aa13.73□□□□□ -0.21
SYNPO-205ENST00000522122 ETV4P43268 484 aa13.73□□□□□ -0.21
SYNPO-205ENST00000522122 ZNF846Q147U1 533 aa13.73□□□□□ -0.21
SYNPO-205ENST00000522122 FNDC3BQ53EP0 1204 aaKnown RBP13.73□□□□□ -0.21
SYNPO-205ENST00000522122 TMEM63BQ5T3F8 832 aa13.73□□□□□ -0.21
SYNPO-205ENST00000522122 IL23RQ5VWK5 629 aa13.73□□□□□ -0.21
SYNPO-205ENST00000522122 HDDC2Q7Z4H3 204 aa13.73□□□□□ -0.21
SYNPO-205ENST00000522122 TMEM110Q86TL2 294 aa13.73□□□□□ -0.21
SYNPO-205ENST00000522122 OLFM1Q99784 485 aa13.73□□□□□ -0.21
SYNPO-205ENST00000522122 ZFYVE1Q9HBF4 777 aa13.73□□□□□ -0.21
SYNPO-205ENST00000522122 SLC7A4O43246 635 aa13.72□□□□□ -0.21
SYNPO-205ENST00000522122 C22orf31O95567 290 aa13.72□□□□□ -0.21
SYNPO-205ENST00000522122 RPS9P46781 194 aaKnown RBP13.72□□□□□ -0.21
SYNPO-205ENST00000522122 THOP1P52888 689 aa13.72□□□□□ -0.21
SYNPO-205ENST00000522122 SMARCB1Q12824 385 aa13.72□□□□□ -0.21
SYNPO-205ENST00000522122 EIF2B5Q13144 721 aaKnown RBP13.72□□□□□ -0.21
SYNPO-205ENST00000522122 ZNF544Q6NX49 715 aa13.72□□□□□ -0.21
SYNPO-205ENST00000522122 RD3Q7Z3Z2 195 aa13.72□□□□□ -0.21
SYNPO-205ENST00000522122 CLHC1Q8NHS4 586 aa13.72□□□□□ -0.21
SYNPO-205ENST00000522122 NRG4Q8WWG1 115 aa13.72□□□□□ -0.21
SYNPO-205ENST00000522122 ROPN1LQ96C74 230 aa13.72□□□□□ -0.21
SYNPO-205ENST00000522122 ALG2Q9H553 416 aa13.72□□□□□ -0.21
SYNPO-205ENST00000522122 KCNK13Q9HB14 408 aa13.72□□□□□ -0.21
SYNPO-205ENST00000522122 LRTM1Q9HBL6 345 aa13.72□□□□□ -0.21
SYNPO-205ENST00000522122 PDLIM7Q9NR12 457 aa13.72□□□□□ -0.21
SYNPO-205ENST00000522122 ZNF358Q9NW07 568 aa13.72□□□□□ -0.21
SYNPO-205ENST00000522122 ZNF490Q9ULM2 529 aaPredicted RBP13.72□□□□□ -0.21
SYNPO-205ENST00000522122 ARIH1Q9Y4X5 557 aaPredicted RBP13.72□□□□□ -0.21
SYNPO-205ENST00000522122 SNX10Q9Y5X0 201 aa13.72□□□□□ -0.21
SYNPO-205ENST00000522122 NR2E3Q9Y5X4 410 aa13.72□□□□□ -0.21
SYNPO-205ENST00000522122 OR1D2P34982 312 aa13.72□□□□□ -0.21
SYNPO-205ENST00000522122 MTHFRP42898 656 aa13.72□□□□□ -0.21
SYNPO-205ENST00000522122 FAM110CQ1W6H9 321 aa13.72□□□□□ -0.21
SYNPO-205ENST00000522122 NADK2Q4G0N4 442 aa13.72□□□□□ -0.21
SYNPO-205ENST00000522122 ANXA8L1Q5VT79 327 aa13.72□□□□□ -0.21
SYNPO-205ENST00000522122 NEK10Q6ZWH5 1172 aa13.72□□□□□ -0.21
SYNPO-205ENST00000522122 R3HCC1LQ7Z5L2 792 aaKnown RBP13.72□□□□□ -0.21
SYNPO-205ENST00000522122 TMEM192Q8IY95 271 aa13.72□□□□□ -0.21
SYNPO-205ENST00000522122 CLP1Q92989 425 aaKnown RBP13.72□□□□□ -0.21
SYNPO-205ENST00000522122 NFKBIZQ9BYH8 718 aa13.72□□□□□ -0.21
SYNPO-205ENST00000522122 TMEM39AQ9NV64 488 aa13.72□□□□□ -0.21
SYNPO-205ENST00000522122 RAI2Q9Y5P3 530 aa13.72□□□□□ -0.21
SYNPO-205ENST00000522122 C9JVG2 144 aa13.72□□□□□ -0.21
SYNPO-205ENST00000522122 SLC25A14O95258 325 aaPredicted RBP13.72□□□□□ -0.21
SYNPO-205ENST00000522122 ZBTB11O95625 1053 aaPredicted RBP13.72□□□□□ -0.21
SYNPO-205ENST00000522122 AMHP03971 560 aa13.72□□□□□ -0.21
SYNPO-205ENST00000522122 CHRNGP07510 517 aa13.72□□□□□ -0.21
SYNPO-205ENST00000522122 WARSP23381 471 aaKnown RBP13.72□□□□□ -0.21
SYNPO-205ENST00000522122 GALK1P51570 392 aa13.72□□□□□ -0.21
SYNPO-205ENST00000522122 STX4Q12846 297 aa13.72□□□□□ -0.21
SYNPO-205ENST00000522122 ZNF460Q14592 562 aa13.72□□□□□ -0.21
SYNPO-205ENST00000522122 TRIM71Q2Q1W2 868 aaKnown RBP13.72□□□□□ -0.21
SYNPO-205ENST00000522122 PLEKHG4Q58EX7 1191 aa13.72□□□□□ -0.21
SYNPO-205ENST00000522122 KIAA0930Q6ICG6 404 aaPredicted RBP13.72□□□□□ -0.21
SYNPO-205ENST00000522122 KLHL17Q6TDP4 642 aa13.72□□□□□ -0.21
SYNPO-205ENST00000522122 CCDC149Q6ZUS6 474 aa13.72□□□□□ -0.21
SYNPO-205ENST00000522122 UBE2R2Q712K3 238 aaPredicted RBP13.72□□□□□ -0.21
SYNPO-205ENST00000522122 RTL3Q8N8U3 475 aaKnown RBP13.72□□□□□ -0.21
SYNPO-205ENST00000522122 DCBLD1Q8N8Z6 715 aa13.72□□□□□ -0.21
SYNPO-205ENST00000522122 OR6K2Q8NGY2 324 aa13.72□□□□□ -0.21
SYNPO-205ENST00000522122 SUSD6Q92537 303 aa13.72□□□□□ -0.21
SYNPO-205ENST00000522122 EMID1Q96A84 441 aaPredicted RBP13.72□□□□□ -0.21
SYNPO-205ENST00000522122 BRD9Q9H8M2 597 aa13.72□□□□□ -0.21
SYNPO-205ENST00000522122 ITGB1BP2Q9UKP3 347 aa13.72□□□□□ -0.21
SYNPO-205ENST00000522122 PADI3Q9ULW8 664 aa13.72□□□□□ -0.21
SYNPO-205ENST00000522122 CCDC189A1A4V9 331 aa13.72□□□□□ -0.21
SYNPO-205ENST00000522122 LGR5O75473 907 aa13.72□□□□□ -0.21
SYNPO-205ENST00000522122 CYP4B1P13584 511 aa13.72□□□□□ -0.21
SYNPO-205ENST00000522122 CCNIQ14094 377 aa13.72□□□□□ -0.21
SYNPO-205ENST00000522122 PAOXQ6QHF9 649 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms