RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 TSTD2Q5T7W7 516 aa9.34□□□□□ -0.91
CLK4-209ENST00000521621 KCTD16Q68DU8 428 aa9.34□□□□□ -0.91
CLK4-209ENST00000521621 CCDC137Q6PK04 289 aaKnown RBP9.34□□□□□ -0.91
CLK4-209ENST00000521621 KDM7AQ6ZMT4 941 aa9.34□□□□□ -0.91
CLK4-209ENST00000521621 TAF8Q7Z7C8 310 aa9.34□□□□□ -0.91
CLK4-209ENST00000521621 NXPE1Q8N323 547 aa9.34□□□□□ -0.91
CLK4-209ENST00000521621 SFRP1Q8N474 314 aa9.34□□□□□ -0.91
CLK4-209ENST00000521621 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.34□□□□□ -0.91
CLK4-209ENST00000521621 KYQ8NBH2 561 aa9.34□□□□□ -0.91
CLK4-209ENST00000521621 OR4K2Q8NGD2 314 aa9.34□□□□□ -0.91
CLK4-209ENST00000521621 COG1Q8WTW3 980 aa9.34□□□□□ -0.91
CLK4-209ENST00000521621 XAB2Q9HCS7 855 aaKnown RBP9.34□□□□□ -0.91
CLK4-209ENST00000521621 MRPL40Q9NQ50 206 aaKnown RBP9.34□□□□□ -0.91
CLK4-209ENST00000521621 TREX1Q9NSU2 369 aa9.34□□□□□ -0.91
CLK4-209ENST00000521621 ZDHHC3Q9NYG2 299 aa9.34□□□□□ -0.91
CLK4-209ENST00000521621 ARL5AQ9Y689 179 aa9.34□□□□□ -0.91
CLK4-209ENST00000521621 PRAMEF1O95521 474 aa9.34□□□□□ -0.91
CLK4-209ENST00000521621 PIRTP0C851 137 aa9.34□□□□□ -0.91
CLK4-209ENST00000521621 CCKBRP32239 447 aa9.34□□□□□ -0.91
CLK4-209ENST00000521621 RPA4Q13156 261 aa9.34□□□□□ -0.91
CLK4-209ENST00000521621 GTF2H3Q13889 308 aa9.34□□□□□ -0.91
CLK4-209ENST00000521621 FRG1Q14331 258 aaKnown RBP9.34□□□□□ -0.91
CLK4-209ENST00000521621 GPRC6AQ5T6X5 926 aa9.34□□□□□ -0.91
CLK4-209ENST00000521621 ZNF534Q76KX8 674 aa9.34□□□□□ -0.91
CLK4-209ENST00000521621 GPR150Q8NGU9 434 aa9.34□□□□□ -0.91
CLK4-209ENST00000521621 ZDHHC1Q8WTX9 485 aa9.34□□□□□ -0.91
CLK4-209ENST00000521621 MAGOHBQ96A72 148 aaKnown RBP9.34□□□□□ -0.91
CLK4-209ENST00000521621 CDKN2AIPNLQ96HQ2 116 aa9.34□□□□□ -0.91
CLK4-209ENST00000521621 RAB33BQ9H082 229 aa9.34□□□□□ -0.91
CLK4-209ENST00000521621 PDP2Q9P2J9 529 aa9.34□□□□□ -0.91
CLK4-209ENST00000521621 DOLKQ9UPQ8 538 aa9.34□□□□□ -0.91
CLK4-209ENST00000521621 ST14Q9Y5Y6 855 aa9.34□□□□□ -0.91
CLK4-209ENST00000521621 LILRA5A6NI73 299 aa9.33□□□□□ -0.92
CLK4-209ENST00000521621 KRT14P02533 472 aa9.33□□□□□ -0.92
CLK4-209ENST00000521621 CELA2BP08218 269 aaPredicted RBP9.33□□□□□ -0.92
CLK4-209ENST00000521621 RALBP11234 206 aa9.33□□□□□ -0.92
CLK4-209ENST00000521621 F3P13726 295 aa9.33□□□□□ -0.92
CLK4-209ENST00000521621 ACRV1P26436 265 aa9.33□□□□□ -0.92
CLK4-209ENST00000521621 PTGIRP43119 386 aa9.33□□□□□ -0.92
CLK4-209ENST00000521621 POLD2P49005 469 aa9.33□□□□□ -0.92
CLK4-209ENST00000521621 PRLHRP49683 370 aa9.33□□□□□ -0.92
CLK4-209ENST00000521621 UBE2IP63279 158 aaKnown RBP9.33□□□□□ -0.92
CLK4-209ENST00000521621 GPLD1P80108 840 aa9.33□□□□□ -0.92
CLK4-209ENST00000521621 PLOD1Q02809 727 aaPredicted RBP9.33□□□□□ -0.92
CLK4-209ENST00000521621 EIF3IQ13347 325 aaKnown RBP9.33□□□□□ -0.92
CLK4-209ENST00000521621 TRA2AQ13595 282 aaKnown RBP eCLIP9.33□□□□□ -0.92
CLK4-209ENST00000521621 TUBB2AQ13885 445 aa9.33□□□□□ -0.92
CLK4-209ENST00000521621 DHX34Q14147 1143 aaKnown RBP9.33□□□□□ -0.92
CLK4-209ENST00000521621 IYDQ6PHW0 289 aa9.33□□□□□ -0.92
CLK4-209ENST00000521621 AFTPHQ6ULP2 937 aa9.33□□□□□ -0.92
CLK4-209ENST00000521621 PPP1R21Q6ZMI0 780 aa9.33□□□□□ -0.92
CLK4-209ENST00000521621 NYAP1Q6ZVC0 841 aa9.33□□□□□ -0.92
CLK4-209ENST00000521621 EFL1Q7Z2Z2 1120 aaKnown RBP9.33□□□□□ -0.92
CLK4-209ENST00000521621 KDELC2Q7Z4H8 507 aa9.33□□□□□ -0.92
CLK4-209ENST00000521621 LRRC6Q86X45 466 aa9.33□□□□□ -0.92
CLK4-209ENST00000521621 ZNF547Q8IVP9 402 aa9.33□□□□□ -0.92
CLK4-209ENST00000521621 LMNTD2Q8IXW0 634 aa9.33□□□□□ -0.92
CLK4-209ENST00000521621 GLIS1Q8NBF1 620 aa9.33□□□□□ -0.92
CLK4-209ENST00000521621 PPHLN1Q8NEY8 458 aaKnown RBP9.33□□□□□ -0.92
CLK4-209ENST00000521621 LIN37Q96GY3 246 aaPredicted RBP9.33□□□□□ -0.92
CLK4-209ENST00000521621 CCM2Q9BSQ5 444 aa9.33□□□□□ -0.92
CLK4-209ENST00000521621 TUBB2BQ9BVA1 445 aa9.33□□□□□ -0.92
CLK4-209ENST00000521621 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.33□□□□□ -0.92
CLK4-209ENST00000521621 TWSG1Q9GZX9 223 aa9.33□□□□□ -0.92
CLK4-209ENST00000521621 SPATS2LQ9NUQ6 558 aaKnown RBP9.33□□□□□ -0.92
CLK4-209ENST00000521621 ACSL5Q9ULC5 683 aa9.33□□□□□ -0.92
CLK4-209ENST00000521621 TMEM98Q9Y2Y6 226 aa9.33□□□□□ -0.92
CLK4-209ENST00000521621 RIF1Q5UIP0 2472 aaKnown RBP9.33□□□□□ -0.92
CLK4-209ENST00000521621 EP300Q09472 2414 aaPredicted RBP9.33□□□□□ -0.92
CLK4-209ENST00000521621 ZFC3H1O60293 1989 aaKnown RBP9.33□□□□□ -0.92
CLK4-209ENST00000521621 A0A0U1RQS6 177 aa9.33□□□□□ -0.92
CLK4-209ENST00000521621 E7EVH7 732 aa9.33□□□□□ -0.92
CLK4-209ENST00000521621 FFAR2O15552 330 aa9.33□□□□□ -0.92
CLK4-209ENST00000521621 SGTAO43765 313 aa9.33□□□□□ -0.92
CLK4-209ENST00000521621 MT-CO3P00414 261 aa9.33□□□□□ -0.92
CLK4-209ENST00000521621 PROS1P07225 676 aa9.33□□□□□ -0.92
CLK4-209ENST00000521621 CXCR5P32302 372 aa9.33□□□□□ -0.92
CLK4-209ENST00000521621 CD151P48509 253 aa9.33□□□□□ -0.92
CLK4-209ENST00000521621 ADARP55265 1226 aaKnown RBP9.33□□□□□ -0.92
CLK4-209ENST00000521621 GNG11P61952 73 aa9.33□□□□□ -0.92
CLK4-209ENST00000521621 ETF1P62495 437 aaKnown RBP9.33□□□□□ -0.92
CLK4-209ENST00000521621 ILF2Q12905 390 aaKnown RBP9.33□□□□□ -0.92
CLK4-209ENST00000521621 DNAJC3Q13217 504 aa9.33□□□□□ -0.92
CLK4-209ENST00000521621 SNX1Q13596 522 aa9.33□□□□□ -0.92
CLK4-209ENST00000521621 NAGSQ8N159 534 aa9.33□□□□□ -0.92
CLK4-209ENST00000521621 NAT8LQ8N9F0 302 aa9.33□□□□□ -0.92
CLK4-209ENST00000521621 OR52K1Q8NGK4 314 aa9.33□□□□□ -0.92
CLK4-209ENST00000521621 OR13J1Q8NGT2 312 aa9.33□□□□□ -0.92
CLK4-209ENST00000521621 OR2L2Q8NH16 312 aa9.33□□□□□ -0.92
CLK4-209ENST00000521621 PHACTR1Q9C0D0 580 aa9.33□□□□□ -0.92
CLK4-209ENST00000521621 POT1Q9NUX5 634 aa9.33□□□□□ -0.92
CLK4-209ENST00000521621 SOX13Q9UN79 622 aa9.33□□□□□ -0.92
CLK4-209ENST00000521621 CFAP99D6REC4 459 aa9.32□□□□□ -0.92
CLK4-209ENST00000521621 ECEL1O95672 775 aa9.32□□□□□ -0.92
CLK4-209ENST00000521621 FOXN2P32314 431 aa9.32□□□□□ -0.92
CLK4-209ENST00000521621 PPARGP37231 505 aaPredicted RBP9.32□□□□□ -0.92
CLK4-209ENST00000521621 AARS2Q5JTZ9 985 aaKnown RBP9.32□□□□□ -0.92
CLK4-209ENST00000521621 GUSBP11Q6P575 273 aa9.32□□□□□ -0.92
CLK4-209ENST00000521621 RBM44Q6ZP01 1051 aaKnown RBP9.32□□□□□ -0.92
CLK4-209ENST00000521621 GSTA5Q7RTV2 222 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms