RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 YWHABP31946 246 aaKnown RBP3.37□□□□□ -1.87
VPS13B-209ENST00000521559 SERPINF1P36955 418 aa3.37□□□□□ -1.87
VPS13B-209ENST00000521559 RGS19P49795 217 aa3.37□□□□□ -1.87
VPS13B-209ENST00000521559 AP2B1P63010 937 aa3.37□□□□□ -1.87
VPS13B-209ENST00000521559 CYP4A11Q02928 519 aa3.37□□□□□ -1.87
VPS13B-209ENST00000521559 TLE2Q04725 743 aa3.37□□□□□ -1.87
VPS13B-209ENST00000521559 PPFIA1Q13136 1202 aa3.37□□□□□ -1.87
VPS13B-209ENST00000521559 PTGISQ16647 500 aa3.37□□□□□ -1.87
VPS13B-209ENST00000521559 LRRC26Q2I0M4 334 aa3.37□□□□□ -1.87
VPS13B-209ENST00000521559 ODF3L2Q3SX64 289 aa3.37□□□□□ -1.87
VPS13B-209ENST00000521559 C5orf22Q49AR2 442 aa3.37□□□□□ -1.87
VPS13B-209ENST00000521559 XKR9Q5GH70 373 aa3.37□□□□□ -1.87
VPS13B-209ENST00000521559 MARCH8Q5T0T0 291 aa3.37□□□□□ -1.87
VPS13B-209ENST00000521559 FAM171A1Q5VUB5 890 aa3.37□□□□□ -1.87
VPS13B-209ENST00000521559 RESP18Q5W5W9 173 aa3.37□□□□□ -1.87
VPS13B-209ENST00000521559 ZNF324BQ6AW86 544 aaPredicted RBP3.37□□□□□ -1.87
VPS13B-209ENST00000521559 SLC30A9Q6PML9 568 aa3.37□□□□□ -1.87
VPS13B-209ENST00000521559 CCDC73Q6ZRK6 1079 aa3.37□□□□□ -1.87
VPS13B-209ENST00000521559 ANO5Q75V66 913 aa3.37□□□□□ -1.87
VPS13B-209ENST00000521559 TRILQ7L0X0 811 aa3.37□□□□□ -1.87
VPS13B-209ENST00000521559 TRMT1LQ7Z2T5 733 aaKnown RBP3.37□□□□□ -1.87
VPS13B-209ENST00000521559 SERINC5Q86VE9 423 aa3.37□□□□□ -1.87
VPS13B-209ENST00000521559 ZNF354CQ86Y25 554 aa3.37□□□□□ -1.87
VPS13B-209ENST00000521559 SLC44A2Q8IWA5 706 aaPredicted RBP3.37□□□□□ -1.87
VPS13B-209ENST00000521559 NME8Q8N427 588 aa3.37□□□□□ -1.87
VPS13B-209ENST00000521559 NKAPQ8N5F7 415 aaKnown RBP3.37□□□□□ -1.87
VPS13B-209ENST00000521559 MYCT1Q8N699 235 aa3.37□□□□□ -1.87
VPS13B-209ENST00000521559 FAM110DQ8TAY7 271 aaPredicted RBP3.37□□□□□ -1.87
VPS13B-209ENST00000521559 SLC2A12Q8TD20 617 aa3.37□□□□□ -1.87
VPS13B-209ENST00000521559 NEUROG1Q92886 237 aa3.37□□□□□ -1.87
VPS13B-209ENST00000521559 URB1-AS1Q96HZ7 61 aa3.37□□□□□ -1.87
VPS13B-209ENST00000521559 EPSTI1Q96J88 318 aa3.37□□□□□ -1.87
VPS13B-209ENST00000521559 CEP170P1Q96L14 293 aa3.37□□□□□ -1.87
VPS13B-209ENST00000521559 SCLT1Q96NL6 688 aa3.37□□□□□ -1.87
VPS13B-209ENST00000521559 PLIN2Q99541 437 aa3.37□□□□□ -1.87
VPS13B-209ENST00000521559 WDR77Q9BQA1 342 aaPredicted RBP3.37□□□□□ -1.87
VPS13B-209ENST00000521559 JPH2Q9BR39 696 aaPredicted RBP3.37□□□□□ -1.87
VPS13B-209ENST00000521559 LXNQ9BS40 222 aa3.37□□□□□ -1.87
VPS13B-209ENST00000521559 TRIM31Q9BZY9 425 aa3.37□□□□□ -1.87
VPS13B-209ENST00000521559 NT5C3AQ9H0P0 336 aa3.37□□□□□ -1.87
VPS13B-209ENST00000521559 TRPV6Q9H1D0 765 aa3.37□□□□□ -1.87
VPS13B-209ENST00000521559 CDT1Q9H211 546 aa3.37□□□□□ -1.87
VPS13B-209ENST00000521559 HIPK3Q9H422 1215 aa3.37□□□□□ -1.87
VPS13B-209ENST00000521559 ELAC1Q9H777 363 aaKnown RBP3.37□□□□□ -1.87
VPS13B-209ENST00000521559 SEPSECSQ9HD40 501 aaKnown RBP3.37□□□□□ -1.87
VPS13B-209ENST00000521559 SETD4Q9NVD3 440 aa3.37□□□□□ -1.87
VPS13B-209ENST00000521559 PROCRQ9UNN8 238 aa3.37□□□□□ -1.87
VPS13B-209ENST00000521559 ICKQ9UPZ9 632 aa3.37□□□□□ -1.87
VPS13B-209ENST00000521559 INSL5Q9Y5Q6 135 aa3.37□□□□□ -1.87
VPS13B-209ENST00000521559 MROH7Q68CQ1 1323 aa3.37□□□□□ -1.87
VPS13B-209ENST00000521559 IGSF9BQ9UPX0 1349 aa3.37□□□□□ -1.87
VPS13B-209ENST00000521559 KDM3AQ9Y4C1 1321 aa3.37□□□□□ -1.87
VPS13B-209ENST00000521559 PARP14Q460N5 1801 aa3.37□□□□□ -1.87
VPS13B-209ENST00000521559 COL1A2P08123 1366 aa3.37□□□□□ -1.87
VPS13B-209ENST00000521559 PLXNB2O15031 1838 aa3.36□□□□□ -1.87
VPS13B-209ENST00000521559 IGKV6-21A0A0C4DH24 114 aa3.36□□□□□ -1.87
VPS13B-209ENST00000521559 ARHGEF35A5YM69 484 aa3.36□□□□□ -1.87
VPS13B-209ENST00000521559 TMEM150BA6NC51 233 aa3.36□□□□□ -1.87
VPS13B-209ENST00000521559 GOLGA6L4A6NEF3 574 aa3.36□□□□□ -1.87
VPS13B-209ENST00000521559 AGAP5A6NIR3 686 aa3.36□□□□□ -1.87
VPS13B-209ENST00000521559 E9PMD0 336 aa3.36□□□□□ -1.87
VPS13B-209ENST00000521559 STMND1H3BQB6 276 aa3.36□□□□□ -1.87
VPS13B-209ENST00000521559 POLR2DO15514 142 aaKnown RBP3.36□□□□□ -1.87
VPS13B-209ENST00000521559 ASAP2O43150 1006 aa3.36□□□□□ -1.87
VPS13B-209ENST00000521559 TNFRSF6BO95407 300 aa3.36□□□□□ -1.87
VPS13B-209ENST00000521559 C22orf31O95567 290 aa3.36□□□□□ -1.87
VPS13B-209ENST00000521559 GLUD1P00367 558 aa3.36□□□□□ -1.87
VPS13B-209ENST00000521559 ACAA1P09110 424 aaPredicted RBP3.36□□□□□ -1.87
VPS13B-209ENST00000521559 CLTBP09497 229 aa3.36□□□□□ -1.87
VPS13B-209ENST00000521559 PLA2G4BP0C869 781 aa3.36□□□□□ -1.87
VPS13B-209ENST00000521559 CHRNB2P17787 502 aa3.36□□□□□ -1.87
VPS13B-209ENST00000521559 TNFRSF8P28908 595 aa3.36□□□□□ -1.87
VPS13B-209ENST00000521559 TNFSF8P32971 234 aa3.36□□□□□ -1.87
VPS13B-209ENST00000521559 GRK6P43250 576 aa3.36□□□□□ -1.87
VPS13B-209ENST00000521559 SYKP43405 635 aa3.36□□□□□ -1.87
VPS13B-209ENST00000521559 GLUD2P49448 558 aa3.36□□□□□ -1.87
VPS13B-209ENST00000521559 SLC12A3P55017 1021 aa3.36□□□□□ -1.87
VPS13B-209ENST00000521559 CRYZQ08257 329 aaKnown RBP3.36□□□□□ -1.87
VPS13B-209ENST00000521559 KEAP1Q14145 624 aa3.36□□□□□ -1.87
VPS13B-209ENST00000521559 NFATC4Q14934 902 aa3.36□□□□□ -1.87
VPS13B-209ENST00000521559 KARSQ15046 597 aaKnown RBP3.36□□□□□ -1.87
VPS13B-209ENST00000521559 ZRSR1Q15695 479 aaKnown RBP3.36□□□□□ -1.87
VPS13B-209ENST00000521559 FSCBQ5H9T9 825 aa3.36□□□□□ -1.87
VPS13B-209ENST00000521559 FNBP1LQ5T0N5 605 aa3.36□□□□□ -1.87
VPS13B-209ENST00000521559 PLA2G4FQ68DD2 849 aa3.36□□□□□ -1.87
VPS13B-209ENST00000521559 NADSYN1Q6IA69 706 aa3.36□□□□□ -1.87
VPS13B-209ENST00000521559 C1orf186Q6ZWK4 172 aa3.36□□□□□ -1.87
VPS13B-209ENST00000521559 RPAINQ86UA6 219 aa3.36□□□□□ -1.87
VPS13B-209ENST00000521559 DCP1BQ8IZD4 617 aaKnown RBP3.36□□□□□ -1.87
VPS13B-209ENST00000521559 METTL13Q8N6R0 699 aa3.36□□□□□ -1.87
VPS13B-209ENST00000521559 PRR26Q8N8Z3 221 aa3.36□□□□□ -1.87
VPS13B-209ENST00000521559 SYT2Q8N9I0 419 aaPredicted RBP3.36□□□□□ -1.87
VPS13B-209ENST00000521559 FSIP1Q8NA03 581 aa3.36□□□□□ -1.87
VPS13B-209ENST00000521559 IQUBQ8NA54 791 aa3.36□□□□□ -1.87
VPS13B-209ENST00000521559 KDM1BQ8NB78 822 aa3.36□□□□□ -1.87
VPS13B-209ENST00000521559 ENGASEQ8NFI3 743 aa3.36□□□□□ -1.87
VPS13B-209ENST00000521559 CMASQ8NFW8 434 aaPredicted RBP3.36□□□□□ -1.87
VPS13B-209ENST00000521559 RASSF8Q8NHQ8 419 aa3.36□□□□□ -1.87
VPS13B-209ENST00000521559 TRAPPC12Q8WVT3 735 aa3.36□□□□□ -1.87
VPS13B-209ENST00000521559 DNAJB3Q8WWF6 145 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms