RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 PDPK2PQ6A1A2 396 aa15.18■□□□□ 0.02
LSM1-203ENST00000520755 IL27RAQ6UWB1 636 aa15.18■□□□□ 0.02
LSM1-203ENST00000520755 ADAMTSL4Q6UY14 1074 aa15.18■□□□□ 0.02
LSM1-203ENST00000520755 LDB1Q86U70 411 aaPredicted RBP15.18■□□□□ 0.02
LSM1-203ENST00000520755 NLRP8Q86W28 1048 aa15.18■□□□□ 0.02
LSM1-203ENST00000520755 DCP2Q8IU60 420 aaKnown RBP15.18■□□□□ 0.02
LSM1-203ENST00000520755 CNTN4Q8IWV2 1026 aa15.18■□□□□ 0.02
LSM1-203ENST00000520755 KIAA2013Q8IYS2 634 aa15.18■□□□□ 0.02
LSM1-203ENST00000520755 OR6P1Q8NGX9 317 aa15.18■□□□□ 0.02
LSM1-203ENST00000520755 OR4L1Q8NH43 312 aa15.18■□□□□ 0.02
LSM1-203ENST00000520755 DTX3LQ8TDB6 740 aa15.18■□□□□ 0.02
LSM1-203ENST00000520755 UBLCP1Q8WVY7 318 aaPredicted RBP15.18■□□□□ 0.02
LSM1-203ENST00000520755 ZSCAN5AQ9BUG6 496 aa15.18■□□□□ 0.02
LSM1-203ENST00000520755 LGR4Q9BXB1 951 aa15.18■□□□□ 0.02
LSM1-203ENST00000520755 CDH19Q9H159 772 aa15.18■□□□□ 0.02
LSM1-203ENST00000520755 ACSS3Q9H6R3 686 aa15.18■□□□□ 0.02
LSM1-203ENST00000520755 GAREM1Q9H706 876 aa15.18■□□□□ 0.02
LSM1-203ENST00000520755 PHPT1Q9NRX4 125 aaPredicted RBP15.18■□□□□ 0.02
LSM1-203ENST00000520755 GPR27Q9NS67 375 aa15.18■□□□□ 0.02
LSM1-203ENST00000520755 SMOXQ9NWM0 555 aa15.18■□□□□ 0.02
LSM1-203ENST00000520755 RABGEF1Q9UJ41 708 aa15.18■□□□□ 0.02
LSM1-203ENST00000520755 APPL1Q9UKG1 709 aa15.18■□□□□ 0.02
LSM1-203ENST00000520755 CNOT6Q9ULM6 557 aaKnown RBP15.18■□□□□ 0.02
LSM1-203ENST00000520755 ZFHX2Q9C0A1 2572 aaPredicted RBP15.18■□□□□ 0.02
LSM1-203ENST00000520755 SPTY2D1-AS1A0A0U1RR47 76 aa15.17■□□□□ 0.02
LSM1-203ENST00000520755 FOXD2O60548 495 aaPredicted RBP15.17■□□□□ 0.02
LSM1-203ENST00000520755 UGT1A9O60656 530 aa15.17■□□□□ 0.02
LSM1-203ENST00000520755 ERLIN1O75477 346 aa15.17■□□□□ 0.02
LSM1-203ENST00000520755 CER1O95813 267 aa15.17■□□□□ 0.02
LSM1-203ENST00000520755 SHBGP04278 402 aa15.17■□□□□ 0.02
LSM1-203ENST00000520755 MYCLP1P12525 358 aaPredicted RBP15.17■□□□□ 0.02
LSM1-203ENST00000520755 UGT1A6P19224 532 aa15.17■□□□□ 0.02
LSM1-203ENST00000520755 ITGALP20701 1170 aa15.17■□□□□ 0.02
LSM1-203ENST00000520755 UGT1A1P22309 533 aa15.17■□□□□ 0.02
LSM1-203ENST00000520755 UGT1A4P22310 534 aa15.17■□□□□ 0.02
LSM1-203ENST00000520755 TEAD1P28347 426 aa15.17■□□□□ 0.02
LSM1-203ENST00000520755 STX2P32856 288 aa15.17■□□□□ 0.02
LSM1-203ENST00000520755 UGT1A3P35503 534 aa15.17■□□□□ 0.02
LSM1-203ENST00000520755 UGT1A5P35504 534 aa15.17■□□□□ 0.02
LSM1-203ENST00000520755 TRIM23P36406 574 aa15.17■□□□□ 0.02
LSM1-203ENST00000520755 SLC1A2P43004 574 aa15.17■□□□□ 0.02
LSM1-203ENST00000520755 CACNG1Q06432 222 aa15.17■□□□□ 0.02
LSM1-203ENST00000520755 MGAT5Q09328 741 aa15.17■□□□□ 0.02
LSM1-203ENST00000520755 FZD2Q14332 565 aa15.17■□□□□ 0.02
LSM1-203ENST00000520755 SLC29A2Q14542 456 aa15.17■□□□□ 0.02
LSM1-203ENST00000520755 TYSND1Q2T9J0 566 aa15.17■□□□□ 0.02
LSM1-203ENST00000520755 KBTBD12Q3ZCT8 623 aa15.17■□□□□ 0.02
LSM1-203ENST00000520755 ZNF542PQ5EBM4 170 aa15.17■□□□□ 0.02
LSM1-203ENST00000520755 ZRANB3Q5FWF4 1079 aa15.17■□□□□ 0.02
LSM1-203ENST00000520755 TEDDM1Q5T9Z0 273 aa15.17■□□□□ 0.02
LSM1-203ENST00000520755 ZNF470Q6ECI4 717 aa15.17■□□□□ 0.02
LSM1-203ENST00000520755 NEPROQ6NW34 567 aa15.17■□□□□ 0.02
LSM1-203ENST00000520755 ENPP7Q6UWV6 458 aa15.17■□□□□ 0.02
LSM1-203ENST00000520755 MACC1Q6ZN28 852 aa15.17■□□□□ 0.02
LSM1-203ENST00000520755 CYS1Q717R9 158 aa15.17■□□□□ 0.02
LSM1-203ENST00000520755 SNX20Q7Z614 316 aa15.17■□□□□ 0.02
LSM1-203ENST00000520755 TRIM74Q86UV6 250 aa15.17■□□□□ 0.02
LSM1-203ENST00000520755 ALYREFQ86V81 257 aaKnown RBP15.17■□□□□ 0.02
LSM1-203ENST00000520755 PARGQ86W56 976 aa15.17■□□□□ 0.02
LSM1-203ENST00000520755 DENND6AQ8IWF6 608 aa15.17■□□□□ 0.02
LSM1-203ENST00000520755 MINDY1Q8N5J2 469 aa15.17■□□□□ 0.02
LSM1-203ENST00000520755 GPR150Q8NGU9 434 aa15.17■□□□□ 0.02
LSM1-203ENST00000520755 HIC2Q96JB3 615 aa15.17■□□□□ 0.02
LSM1-203ENST00000520755 WDR92Q96MX6 357 aa15.17■□□□□ 0.02
LSM1-203ENST00000520755 TEX101Q9BY14 249 aa15.17■□□□□ 0.02
LSM1-203ENST00000520755 ASB8Q9H765 288 aa15.17■□□□□ 0.02
LSM1-203ENST00000520755 UGT1A7Q9HAW7 530 aa15.17■□□□□ 0.02
LSM1-203ENST00000520755 UGT1A10Q9HAW8 530 aa15.17■□□□□ 0.02
LSM1-203ENST00000520755 UGT1A8Q9HAW9 530 aa15.17■□□□□ 0.02
LSM1-203ENST00000520755 IL21RQ9HBE5 538 aa15.17■□□□□ 0.02
LSM1-203ENST00000520755 IARS2Q9NSE4 1012 aaKnown RBP15.17■□□□□ 0.02
LSM1-203ENST00000520755 CATSPERZQ9NTU4 200 aa15.17■□□□□ 0.02
LSM1-203ENST00000520755 DNAJC28Q9NX36 388 aa15.17■□□□□ 0.02
LSM1-203ENST00000520755 PSAT1Q9Y617 370 aa15.17■□□□□ 0.02
LSM1-203ENST00000520755 A0A087WUV0 522 aaPredicted RBP15.16■□□□□ 0.02
LSM1-203ENST00000520755 TMEM202A6NGA9 273 aa15.16■□□□□ 0.02
LSM1-203ENST00000520755 CD3EAPO15446 510 aaKnown RBP15.16■□□□□ 0.02
LSM1-203ENST00000520755 GDF9O60383 454 aa15.16■□□□□ 0.02
LSM1-203ENST00000520755 OGNP20774 298 aaKnown RBP15.16■□□□□ 0.02
LSM1-203ENST00000520755 GCAP28676 217 aa15.16■□□□□ 0.02
LSM1-203ENST00000520755 KIAA1024LP59773 190 aa15.16■□□□□ 0.02
LSM1-203ENST00000520755 MPP1Q00013 466 aa15.16■□□□□ 0.02
LSM1-203ENST00000520755 IL9RQ01113 521 aa15.16■□□□□ 0.02
LSM1-203ENST00000520755 ITGA9Q13797 1035 aa15.16■□□□□ 0.02
LSM1-203ENST00000520755 DBN1Q16643 649 aa15.16■□□□□ 0.02
LSM1-203ENST00000520755 ZNF423Q2M1K9 1284 aa15.16■□□□□ 0.02
LSM1-203ENST00000520755 KHDC1Q4VXA5 237 aaKnown RBP15.16■□□□□ 0.02
LSM1-203ENST00000520755 ZNF789Q5FWF6 425 aa15.16■□□□□ 0.02
LSM1-203ENST00000520755 ZNF449Q6P9G9 518 aa15.16■□□□□ 0.02
LSM1-203ENST00000520755 DOK6Q6PKX4 331 aa15.16■□□□□ 0.02
LSM1-203ENST00000520755 CILP2Q8IUL8 1156 aa15.16■□□□□ 0.02
LSM1-203ENST00000520755 NXPE1Q8N323 547 aa15.16■□□□□ 0.02
LSM1-203ENST00000520755 ZNF398Q8TD17 642 aa15.16■□□□□ 0.02
LSM1-203ENST00000520755 VPS35Q96QK1 796 aa15.16■□□□□ 0.02
LSM1-203ENST00000520755 ELF4Q99607 663 aaPredicted RBP15.16■□□□□ 0.02
LSM1-203ENST00000520755 FAM167BQ9BTA0 163 aa15.16■□□□□ 0.02
LSM1-203ENST00000520755 MCMBPQ9BTE3 642 aa15.16■□□□□ 0.02
LSM1-203ENST00000520755 CAAP1Q9H8G2 361 aa15.16■□□□□ 0.02
LSM1-203ENST00000520755 ERVMER34-1Q9H9K5 563 aa15.16■□□□□ 0.02
LSM1-203ENST00000520755 ARFGAP3Q9NP61 516 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms