RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 CES5AQ6NT32 575 aa4.08□□□□□ -1.76
SQLE-204ENST00000520493 METTL2BQ6P1Q9 378 aaKnown RBP4.08□□□□□ -1.76
SQLE-204ENST00000520493 QSOX2Q6ZRP7 698 aa4.08□□□□□ -1.76
SQLE-204ENST00000520493 PLPPR4Q7Z2D5 763 aa4.08□□□□□ -1.76
SQLE-204ENST00000520493 CACNA2D4Q7Z3S7 1137 aa4.08□□□□□ -1.76
SQLE-204ENST00000520493 NOXA1Q86UR1 476 aa4.08□□□□□ -1.76
SQLE-204ENST00000520493 KBTBD6Q86V97 674 aa4.08□□□□□ -1.76
SQLE-204ENST00000520493 METTL23Q86XA0 190 aa4.08□□□□□ -1.76
SQLE-204ENST00000520493 ARID3BQ8IVW6 561 aaPredicted RBP4.08□□□□□ -1.76
SQLE-204ENST00000520493 SLC35F3Q8IY50 421 aa4.08□□□□□ -1.76
SQLE-204ENST00000520493 PARP16Q8N5Y8 322 aa4.08□□□□□ -1.76
SQLE-204ENST00000520493 AGBL3Q8NEM8 1001 aa4.08□□□□□ -1.76
SQLE-204ENST00000520493 OR14A16Q8NHC5 309 aa4.08□□□□□ -1.76
SQLE-204ENST00000520493 GDAP1Q8TB36 358 aa4.08□□□□□ -1.76
SQLE-204ENST00000520493 ZKSCAN4Q969J2 545 aaPredicted RBP4.08□□□□□ -1.76
SQLE-204ENST00000520493 ZNF622Q969S3 477 aaKnown RBP eCLIP4.08□□□□□ -1.76
SQLE-204ENST00000520493 ARSGQ96EG1 525 aa4.08□□□□□ -1.76
SQLE-204ENST00000520493 RRNAD1Q96FB5 475 aaKnown RBP4.08□□□□□ -1.76
SQLE-204ENST00000520493 ELMOD3Q96FG2 381 aa4.08□□□□□ -1.76
SQLE-204ENST00000520493 METTL2AQ96IZ6 378 aaKnown RBP4.08□□□□□ -1.76
SQLE-204ENST00000520493 PPP1R13BQ96KQ4 1090 aa4.08□□□□□ -1.76
SQLE-204ENST00000520493 DACH2Q96NX9 599 aa4.08□□□□□ -1.76
SQLE-204ENST00000520493 GPATCH1Q9BRR8 931 aaKnown RBP4.08□□□□□ -1.76
SQLE-204ENST00000520493 DESI2Q9BSY9 194 aa4.08□□□□□ -1.76
SQLE-204ENST00000520493 TRPV4Q9HBA0 871 aa4.08□□□□□ -1.76
SQLE-204ENST00000520493 IL36RNQ9UBH0 155 aa4.08□□□□□ -1.76
SQLE-204ENST00000520493 ANAPC5Q9UJX4 755 aa4.08□□□□□ -1.76
SQLE-204ENST00000520493 PADI1Q9ULC6 663 aa4.08□□□□□ -1.76
SQLE-204ENST00000520493 PTRH2Q9Y3E5 179 aaKnown RBP4.08□□□□□ -1.76
SQLE-204ENST00000520493 SRPRBQ9Y5M8 271 aaKnown RBP4.08□□□□□ -1.76
SQLE-204ENST00000520493 RAI2Q9Y5P3 530 aa4.08□□□□□ -1.76
SQLE-204ENST00000520493 CKAP5Q14008 2032 aa4.07□□□□□ -1.76
SQLE-204ENST00000520493 ARHGEF40Q8TER5 1519 aa4.07□□□□□ -1.76
SQLE-204ENST00000520493 IFNL4K9M1U5 179 aa4.07□□□□□ -1.76
SQLE-204ENST00000520493 WDR46O15213 610 aaKnown RBP4.07□□□□□ -1.76
SQLE-204ENST00000520493 OGG1O15527 345 aa4.07□□□□□ -1.76
SQLE-204ENST00000520493 ATP5BP06576 529 aaKnown RBP4.07□□□□□ -1.76
SQLE-204ENST00000520493 TUBBP07437 444 aa4.07□□□□□ -1.76
SQLE-204ENST00000520493 IL7RP16871 459 aa4.07□□□□□ -1.76
SQLE-204ENST00000520493 TRIM21P19474 475 aaKnown RBP4.07□□□□□ -1.76
SQLE-204ENST00000520493 GP5P40197 560 aa4.07□□□□□ -1.76
SQLE-204ENST00000520493 CLK1P49759 484 aaKnown RBP4.07□□□□□ -1.76
SQLE-204ENST00000520493 METAP2P50579 478 aaKnown RBP eCLIP4.07□□□□□ -1.76
SQLE-204ENST00000520493 RPL36AP83881 106 aaKnown RBP4.07□□□□□ -1.76
SQLE-204ENST00000520493 CXCL9Q07325 125 aa4.07□□□□□ -1.76
SQLE-204ENST00000520493 TRAF1Q13077 416 aa4.07□□□□□ -1.76
SQLE-204ENST00000520493 GRAPQ13588 217 aa4.07□□□□□ -1.76
SQLE-204ENST00000520493 SNTB1Q13884 538 aaKnown RBP4.07□□□□□ -1.76
SQLE-204ENST00000520493 CAPSQ13938 189 aa4.07□□□□□ -1.76
SQLE-204ENST00000520493 KCNC3Q14003 757 aa4.07□□□□□ -1.76
SQLE-204ENST00000520493 NEDD9Q14511 834 aa4.07□□□□□ -1.76
SQLE-204ENST00000520493 C8orf82Q6P1X6 216 aaPredicted RBP4.07□□□□□ -1.76
SQLE-204ENST00000520493 TMEM71Q6P5X7 295 aa4.07□□□□□ -1.76
SQLE-204ENST00000520493 USP43Q70EL4 1123 aa4.07□□□□□ -1.76
SQLE-204ENST00000520493 CREB3L2Q70SY1 520 aa4.07□□□□□ -1.76
SQLE-204ENST00000520493 ZNF367Q7RTV3 350 aa4.07□□□□□ -1.76
SQLE-204ENST00000520493 GLRX5Q86SX6 157 aa4.07□□□□□ -1.76
SQLE-204ENST00000520493 NDUFAF2Q8N183 169 aa4.07□□□□□ -1.76
SQLE-204ENST00000520493 HJURPQ8NCD3 748 aaPredicted RBP4.07□□□□□ -1.76
SQLE-204ENST00000520493 MCUQ8NE86 351 aa4.07□□□□□ -1.76
SQLE-204ENST00000520493 APPL2Q8NEU8 664 aa4.07□□□□□ -1.76
SQLE-204ENST00000520493 Q8NFD4 153 aa4.07□□□□□ -1.76
SQLE-204ENST00000520493 CEP76Q8TAP6 659 aa4.07□□□□□ -1.76
SQLE-204ENST00000520493 IGSF8Q969P0 613 aa4.07□□□□□ -1.76
SQLE-204ENST00000520493 TMCO6Q96DC7 493 aa4.07□□□□□ -1.76
SQLE-204ENST00000520493 APOLD1Q96LR9 279 aa4.07□□□□□ -1.76
SQLE-204ENST00000520493 DGAT2Q96PD7 388 aa4.07□□□□□ -1.76
SQLE-204ENST00000520493 GBP5Q96PP8 586 aa4.07□□□□□ -1.76
SQLE-204ENST00000520493 GFM1Q96RP9 751 aaKnown RBP4.07□□□□□ -1.76
SQLE-204ENST00000520493 SRSF8Q9BRL6 282 aaKnown RBP4.07□□□□□ -1.76
SQLE-204ENST00000520493 MSTO1Q9BUK6 570 aa4.07□□□□□ -1.76
SQLE-204ENST00000520493 MKKSQ9NPJ1 570 aaPredicted RBP4.07□□□□□ -1.76
SQLE-204ENST00000520493 PFDN4Q9NQP4 134 aa4.07□□□□□ -1.76
SQLE-204ENST00000520493 CYSLTR2Q9NS75 346 aa4.07□□□□□ -1.76
SQLE-204ENST00000520493 TXLNGQ9NUQ3 528 aa4.07□□□□□ -1.76
SQLE-204ENST00000520493 OSGIN1Q9UJX0 560 aa4.07□□□□□ -1.76
SQLE-204ENST00000520493 PCDHGB1Q9Y5G3 927 aa4.07□□□□□ -1.76
SQLE-204ENST00000520493 STON1Q9Y6Q2 735 aa4.07□□□□□ -1.76
SQLE-204ENST00000520493 GPRASP1Q5JY77 1395 aa4.06□□□□□ -1.76
SQLE-204ENST00000520493 OBSCNQ5VST9 7968 aa4.06□□□□□ -1.76
SQLE-204ENST00000520493 ZNF541Q9H0D2 1346 aa4.06□□□□□ -1.76
SQLE-204ENST00000520493 LOC102723996A0A087X1L8 192 aa4.06□□□□□ -1.76
SQLE-204ENST00000520493 A0A1B0GVM2 712 aa4.06□□□□□ -1.76
SQLE-204ENST00000520493 A0A1W2PR77 199 aa4.06□□□□□ -1.76
SQLE-204ENST00000520493 TRBC2A0A5B9 178 aa4.06□□□□□ -1.76
SQLE-204ENST00000520493 KANSL1LA0AUZ9 987 aa4.06□□□□□ -1.76
SQLE-204ENST00000520493 DENND3A2RUS2 1198 aa4.06□□□□□ -1.76
SQLE-204ENST00000520493 GTPBP10A4D1E9 387 aaKnown RBP4.06□□□□□ -1.76
SQLE-204ENST00000520493 ADAMDEC1O15204 470 aa4.06□□□□□ -1.76
SQLE-204ENST00000520493 HTATSF1O43719 755 aaKnown RBP4.06□□□□□ -1.76
SQLE-204ENST00000520493 KRT86O43790 486 aa4.06□□□□□ -1.76
SQLE-204ENST00000520493 SLU7O95391 586 aaKnown RBP4.06□□□□□ -1.76
SQLE-204ENST00000520493 MAOAP21397 527 aa4.06□□□□□ -1.76
SQLE-204ENST00000520493 UBA1P22314 1058 aaKnown RBP4.06□□□□□ -1.76
SQLE-204ENST00000520493 GNLYP22749 145 aa4.06□□□□□ -1.76
SQLE-204ENST00000520493 SP100P23497 879 aaPredicted RBP4.06□□□□□ -1.76
SQLE-204ENST00000520493 CPT2P23786 658 aa4.06□□□□□ -1.76
SQLE-204ENST00000520493 MT3P25713 68 aa4.06□□□□□ -1.76
SQLE-204ENST00000520493 TCF7P36402 384 aaPredicted RBP4.06□□□□□ -1.76
SQLE-204ENST00000520493 ARSEP51690 589 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms