RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 MRPS34P82930 218 aaKnown RBP3.28□□□□□ -1.88
HMGB1P41-201ENST00000520234 HMGN5P82970 282 aaKnown RBP3.28□□□□□ -1.88
HMGB1P41-201ENST00000520234 FOXM1Q08050 763 aa3.28□□□□□ -1.88
HMGB1P41-201ENST00000520234 DDR1Q08345 913 aa3.28□□□□□ -1.88
HMGB1P41-201ENST00000520234 DLG1Q12959 904 aa3.28□□□□□ -1.88
HMGB1P41-201ENST00000520234 AIMP2Q13155 320 aaKnown RBP3.28□□□□□ -1.88
HMGB1P41-201ENST00000520234 NAB2Q15742 525 aa3.28□□□□□ -1.88
HMGB1P41-201ENST00000520234 KIF19Q2TAC6 998 aa3.28□□□□□ -1.88
HMGB1P41-201ENST00000520234 CDONQ4KMG0 1287 aa3.28□□□□□ -1.88
HMGB1P41-201ENST00000520234 KIAA1161Q6NSJ0 714 aa3.28□□□□□ -1.88
HMGB1P41-201ENST00000520234 MZT2BQ6NZ67 158 aa3.28□□□□□ -1.88
HMGB1P41-201ENST00000520234 WDR73Q6P4I2 378 aa3.28□□□□□ -1.88
HMGB1P41-201ENST00000520234 RHBDF2Q6PJF5 856 aa3.28□□□□□ -1.88
HMGB1P41-201ENST00000520234 SASS6Q6UVJ0 657 aa3.28□□□□□ -1.88
HMGB1P41-201ENST00000520234 SEPT14Q6ZU15 432 aa3.28□□□□□ -1.88
HMGB1P41-201ENST00000520234 MEPCEQ7L2J0 689 aaKnown RBP3.28□□□□□ -1.88
HMGB1P41-201ENST00000520234 FOXRED2Q8IWF2 684 aa3.28□□□□□ -1.88
HMGB1P41-201ENST00000520234 RPAP2Q8IXW5 612 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P41-201ENST00000520234 CCDC13Q8IYE1 715 aa3.28□□□□□ -1.88
HMGB1P41-201ENST00000520234 OR14L1PQ8NHC6 308 aa3.28□□□□□ -1.88
HMGB1P41-201ENST00000520234 ANKRD7Q92527 254 aa3.28□□□□□ -1.88
HMGB1P41-201ENST00000520234 IGSF8Q969P0 613 aa3.28□□□□□ -1.88
HMGB1P41-201ENST00000520234 SNX21Q969T3 373 aa3.28□□□□□ -1.88
HMGB1P41-201ENST00000520234 SCMH1Q96GD3 660 aa3.28□□□□□ -1.88
HMGB1P41-201ENST00000520234 CCDC34Q96HJ3 373 aa3.28□□□□□ -1.88
HMGB1P41-201ENST00000520234 PGAM5Q96HS1 289 aa3.28□□□□□ -1.88
HMGB1P41-201ENST00000520234 C1orf74Q96LT6 269 aa3.28□□□□□ -1.88
HMGB1P41-201ENST00000520234 CMTM3Q96MX0 182 aa3.28□□□□□ -1.88
HMGB1P41-201ENST00000520234 WDFY2Q96P53 400 aa3.28□□□□□ -1.88
HMGB1P41-201ENST00000520234 CHCHD6Q9BRQ6 235 aa3.28□□□□□ -1.88
HMGB1P41-201ENST00000520234 SIL1Q9H173 461 aa3.28□□□□□ -1.88
HMGB1P41-201ENST00000520234 C6orf106Q9H6K1 298 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P41-201ENST00000520234 SYNCQ9H7C4 482 aa3.28□□□□□ -1.88
HMGB1P41-201ENST00000520234 YY1AP1Q9H869 796 aa3.28□□□□□ -1.88
HMGB1P41-201ENST00000520234 SLC28A3Q9HAS3 691 aa3.28□□□□□ -1.88
HMGB1P41-201ENST00000520234 PLEKHA5Q9HAU0 1116 aa3.28□□□□□ -1.88
HMGB1P41-201ENST00000520234 ACSS1Q9NUB1 689 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P41-201ENST00000520234 BLOC1S4Q9NUP1 217 aa3.28□□□□□ -1.88
HMGB1P41-201ENST00000520234 SEPT11Q9NVA2 429 aaKnown RBP3.28□□□□□ -1.88
HMGB1P41-201ENST00000520234 ZNF224Q9NZL3 707 aa3.28□□□□□ -1.88
HMGB1P41-201ENST00000520234 CWC15Q9P013 229 aaKnown RBP3.28□□□□□ -1.88
HMGB1P41-201ENST00000520234 SIX4Q9UIU6 781 aa3.28□□□□□ -1.88
HMGB1P41-201ENST00000520234 PNMA2Q9UL42 364 aa3.28□□□□□ -1.88
HMGB1P41-201ENST00000520234 ACSL5Q9ULC5 683 aa3.28□□□□□ -1.88
HMGB1P41-201ENST00000520234 SESN1Q9Y6P5 492 aa3.28□□□□□ -1.88
HMGB1P41-201ENST00000520234 ABCA9Q8IUA7 1624 aa3.28□□□□□ -1.88
HMGB1P41-201ENST00000520234 ERCC6L2Q5T890 1561 aa3.28□□□□□ -1.88
HMGB1P41-201ENST00000520234 SETBP1Q9Y6X0 1596 aa3.28□□□□□ -1.88
HMGB1P41-201ENST00000520234 ZFYVE16Q7Z3T8 1539 aa3.28□□□□□ -1.88
HMGB1P41-201ENST00000520234 ZNF518AQ6AHZ1 1483 aa3.28□□□□□ -1.88
HMGB1P41-201ENST00000520234 NSD2O96028 1365 aa3.27□□□□□ -1.89
HMGB1P41-201ENST00000520234 ZCCHC11Q5TAX3 1644 aaKnown RBP3.27□□□□□ -1.89
HMGB1P41-201ENST00000520234 INO80Q9ULG1 1556 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P41-201ENST00000520234 ANKRD18BA2A2Z9 1011 aa3.27□□□□□ -1.89
HMGB1P41-201ENST00000520234 MAGEA13PA6NCF6 341 aa3.27□□□□□ -1.89
HMGB1P41-201ENST00000520234 C4orf47A7E2U8 309 aa3.27□□□□□ -1.89
HMGB1P41-201ENST00000520234 A8MZ25 164 aa3.27□□□□□ -1.89
HMGB1P41-201ENST00000520234 PRR23D1E9PI22 279 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P41-201ENST00000520234 SPINT2O43291 252 aa3.27□□□□□ -1.89
HMGB1P41-201ENST00000520234 CLDN14O95500 239 aa3.27□□□□□ -1.89
HMGB1P41-201ENST00000520234 PRR23D2P0DMB1 279 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P41-201ENST00000520234 TGFB3P10600 412 aa3.27□□□□□ -1.89
HMGB1P41-201ENST00000520234 FGF3P11487 239 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P41-201ENST00000520234 RARGP13631 454 aa3.27□□□□□ -1.89
HMGB1P41-201ENST00000520234 TM4SF1P30408 202 aa3.27□□□□□ -1.89
HMGB1P41-201ENST00000520234 HOXA13P31271 388 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P41-201ENST00000520234 PIK3CAP42336 1068 aa3.27□□□□□ -1.89
HMGB1P41-201ENST00000520234 ZNF155Q12901 538 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P41-201ENST00000520234 MAD2L1Q13257 205 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P41-201ENST00000520234 TNFAIP1Q13829 316 aa3.27□□□□□ -1.89
HMGB1P41-201ENST00000520234 SLC39A14Q15043 492 aa3.27□□□□□ -1.89
HMGB1P41-201ENST00000520234 ASIC2Q16515 512 aa3.27□□□□□ -1.89
HMGB1P41-201ENST00000520234 DECR1Q16698 335 aa3.27□□□□□ -1.89
HMGB1P41-201ENST00000520234 MYLK3Q32MK0 819 aa3.27□□□□□ -1.89
HMGB1P41-201ENST00000520234 PCGF3Q3KNV8 242 aa3.27□□□□□ -1.89
HMGB1P41-201ENST00000520234 ZSCAN23Q3MJ62 389 aa3.27□□□□□ -1.89
HMGB1P41-201ENST00000520234 SETMARQ53H47 684 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P41-201ENST00000520234 DCST1Q5T197 706 aa3.27□□□□□ -1.89
HMGB1P41-201ENST00000520234 GPATCH4Q5T3I0 446 aaKnown RBP3.27□□□□□ -1.89
HMGB1P41-201ENST00000520234 ZNF324BQ6AW86 544 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P41-201ENST00000520234 HIST2H2BCQ6DN03 193 aa3.27□□□□□ -1.89
HMGB1P41-201ENST00000520234 HIST2H2BDQ6DRA6 164 aa3.27□□□□□ -1.89
HMGB1P41-201ENST00000520234 JADE1Q6IE81 842 aa3.27□□□□□ -1.89
HMGB1P41-201ENST00000520234 DUS1LQ6P1R4 473 aaKnown RBP3.27□□□□□ -1.89
HMGB1P41-201ENST00000520234 RBM23Q86U06 439 aaKnown RBP3.27□□□□□ -1.89
HMGB1P41-201ENST00000520234 CHERPQ8IWX8 916 aaKnown RBP3.27□□□□□ -1.89
HMGB1P41-201ENST00000520234 TEX11Q8IYF3 940 aa3.27□□□□□ -1.89
HMGB1P41-201ENST00000520234 ADGRF2Q8IZF7 708 aa3.27□□□□□ -1.89
HMGB1P41-201ENST00000520234 RND1Q92730 232 aa3.27□□□□□ -1.89
HMGB1P41-201ENST00000520234 TANKQ92844 425 aa3.27□□□□□ -1.89
HMGB1P41-201ENST00000520234 BICD1Q96G01 975 aa3.27□□□□□ -1.89
HMGB1P41-201ENST00000520234 C3orf30Q96M34 536 aa3.27□□□□□ -1.89
HMGB1P41-201ENST00000520234 MAGIXQ9H6Y5 334 aa3.27□□□□□ -1.89
HMGB1P41-201ENST00000520234 NOX4Q9NPH5 578 aa3.27□□□□□ -1.89
HMGB1P41-201ENST00000520234 TINAGQ9UJW2 476 aa3.27□□□□□ -1.89
HMGB1P41-201ENST00000520234 FBXW11Q9UKB1 542 aa3.27□□□□□ -1.89
HMGB1P41-201ENST00000520234 LOXL2Q9Y4K0 774 aa3.27□□□□□ -1.89
HMGB1P41-201ENST00000520234 ATP7AQ04656 1500 aa3.27□□□□□ -1.89
HMGB1P41-201ENST00000520234 NKTRP30414 1462 aaKnown RBP3.27□□□□□ -1.89
HMGB1P41-201ENST00000520234 NOS1P29475 1434 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms