RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 GPRC6AQ5T6X5 926 aa21.73■■□□□ 1.07
VEGFA-217ENST00000518538 SLC30A9Q6PML9 568 aa21.73■■□□□ 1.07
VEGFA-217ENST00000518538 CHST15Q7LFX5 561 aaPredicted RBP21.73■■□□□ 1.07
VEGFA-217ENST00000518538 KYQ8NBH2 561 aa21.73■■□□□ 1.07
VEGFA-217ENST00000518538 GPR156Q8NFN8 814 aa21.73■■□□□ 1.07
VEGFA-217ENST00000518538 ULK4Q96C45 1275 aa21.73■■□□□ 1.07
VEGFA-217ENST00000518538 RUNDC3BQ96NL0 473 aa21.73■■□□□ 1.07
VEGFA-217ENST00000518538 DPEP2Q9H4A9 486 aa21.73■■□□□ 1.07
VEGFA-217ENST00000518538 GULP1Q9UBP9 304 aa21.73■■□□□ 1.07
VEGFA-217ENST00000518538 RIMKLBQ9ULI2 386 aa21.73■■□□□ 1.07
VEGFA-217ENST00000518538 PLEKHM1Q9Y4G2 1056 aa21.73■■□□□ 1.07
VEGFA-217ENST00000518538 SLC30A1Q9Y6M5 507 aa21.73■■□□□ 1.07
VEGFA-217ENST00000518538 TCRBV7S3A2A0A539 114 aa21.72■■□□□ 1.07
VEGFA-217ENST00000518538 AGAP14A8MT82 685 aa21.72■■□□□ 1.07
VEGFA-217ENST00000518538 CCDC188H7C350 402 aa21.72■■□□□ 1.07
VEGFA-217ENST00000518538 CCL22O00626 93 aa21.72■■□□□ 1.07
VEGFA-217ENST00000518538 GP1BAP07359 652 aa21.72■■□□□ 1.07
VEGFA-217ENST00000518538 MC4RP32245 332 aa21.72■■□□□ 1.07
VEGFA-217ENST00000518538 SESN2P58004 480 aaPredicted RBP21.72■■□□□ 1.07
VEGFA-217ENST00000518538 SARNPP82979 210 aaKnown RBP21.72■■□□□ 1.07
VEGFA-217ENST00000518538 GTF2H3Q13889 308 aa21.72■■□□□ 1.07
VEGFA-217ENST00000518538 PPP1R7Q15435 360 aa21.72■■□□□ 1.07
VEGFA-217ENST00000518538 GUSBP11Q6P575 273 aa21.72■■□□□ 1.07
VEGFA-217ENST00000518538 LRRC8BQ6P9F7 803 aa21.72■■□□□ 1.07
VEGFA-217ENST00000518538 ZNF534Q76KX8 674 aa21.72■■□□□ 1.07
VEGFA-217ENST00000518538 SNX20Q7Z614 316 aa21.72■■□□□ 1.07
VEGFA-217ENST00000518538 CHCHD4Q8N4Q1 142 aa21.72■■□□□ 1.07
VEGFA-217ENST00000518538 CPT1BQ92523 772 aa21.72■■□□□ 1.07
VEGFA-217ENST00000518538 NAT6Q93015 286 aa21.72■■□□□ 1.07
VEGFA-217ENST00000518538 CDKN2AIPNLQ96HQ2 116 aa21.72■■□□□ 1.07
VEGFA-217ENST00000518538 TTC25Q96NG3 672 aa21.72■■□□□ 1.07
VEGFA-217ENST00000518538 SPATS2LQ9NUQ6 558 aaKnown RBP21.72■■□□□ 1.07
VEGFA-217ENST00000518538 PADI4Q9UM07 663 aa21.72■■□□□ 1.07
VEGFA-217ENST00000518538 WASF3Q9UPY6 502 aa21.72■■□□□ 1.07
VEGFA-217ENST00000518538 TCAF1Q9Y4C2 921 aa21.72■■□□□ 1.07
VEGFA-217ENST00000518538 CCDC78A2IDD5 438 aa21.71■■□□□ 1.07
VEGFA-217ENST00000518538 B4DGG1 531 aa21.71■■□□□ 1.07
VEGFA-217ENST00000518538 KMOO15229 486 aa21.71■■□□□ 1.07
VEGFA-217ENST00000518538 NOBOXO60393 691 aa21.71■■□□□ 1.07
VEGFA-217ENST00000518538 ACP5P13686 325 aa21.71■■□□□ 1.07
VEGFA-217ENST00000518538 NPY2RP49146 381 aa21.71■■□□□ 1.07
VEGFA-217ENST00000518538 TERF1P54274 439 aa21.71■■□□□ 1.07
VEGFA-217ENST00000518538 GPR33Q49SQ1 333 aa21.71■■□□□ 1.07
VEGFA-217ENST00000518538 PCID2Q5JVF3 399 aa21.71■■□□□ 1.07
VEGFA-217ENST00000518538 TSTD2Q5T7W7 516 aa21.71■■□□□ 1.07
VEGFA-217ENST00000518538 CRTC3Q6UUV7 619 aa21.71■■□□□ 1.07
VEGFA-217ENST00000518538 DHRS13Q6UX07 377 aa21.71■■□□□ 1.07
VEGFA-217ENST00000518538 NLRP9Q7RTR0 991 aa21.71■■□□□ 1.07
VEGFA-217ENST00000518538 LRRTM4Q86VH4 590 aa21.71■■□□□ 1.07
VEGFA-217ENST00000518538 PPHLN1Q8NEY8 458 aaKnown RBP21.71■■□□□ 1.07
VEGFA-217ENST00000518538 IFI44Q8TCB0 444 aa21.71■■□□□ 1.07
VEGFA-217ENST00000518538 ZDHHC1Q8WTX9 485 aa21.71■■□□□ 1.07
VEGFA-217ENST00000518538 PEX13Q92968 403 aa21.71■■□□□ 1.07
VEGFA-217ENST00000518538 IL22Q9GZX6 179 aa21.71■■□□□ 1.07
VEGFA-217ENST00000518538 BFARQ9NZS9 450 aa21.71■■□□□ 1.07
VEGFA-217ENST00000518538 CRLS1Q9UJA2 301 aa21.71■■□□□ 1.07
VEGFA-217ENST00000518538 CPED1A4D0V7 1026 aa21.7■■□□□ 1.06
VEGFA-217ENST00000518538 HYAL3O43820 417 aaPredicted RBP21.7■■□□□ 1.06
VEGFA-217ENST00000518538 MSH3P20585 1137 aa21.7■■□□□ 1.06
VEGFA-217ENST00000518538 ARSDP51689 593 aa21.7■■□□□ 1.06
VEGFA-217ENST00000518538 SHC2P98077 582 aa21.7■■□□□ 1.06
VEGFA-217ENST00000518538 E2F1Q01094 437 aa21.7■■□□□ 1.06
VEGFA-217ENST00000518538 ACVR1Q04771 509 aa21.7■■□□□ 1.06
VEGFA-217ENST00000518538 PTK6Q13882 451 aa21.7■■□□□ 1.06
VEGFA-217ENST00000518538 C14orf28Q4W4Y0 310 aa21.7■■□□□ 1.06
VEGFA-217ENST00000518538 ANKRD22Q5VYY1 191 aa21.7■■□□□ 1.06
VEGFA-217ENST00000518538 EFL1Q7Z2Z2 1120 aaKnown RBP21.7■■□□□ 1.06
VEGFA-217ENST00000518538 ZNF547Q8IVP9 402 aa21.7■■□□□ 1.06
VEGFA-217ENST00000518538 KLHL7Q8IXQ5 586 aa21.7■■□□□ 1.06
VEGFA-217ENST00000518538 NXPE1Q8N323 547 aa21.7■■□□□ 1.06
VEGFA-217ENST00000518538 OR6C4Q8NGE1 309 aa21.7■■□□□ 1.06
VEGFA-217ENST00000518538 OR13J1Q8NGT2 312 aa21.7■■□□□ 1.06
VEGFA-217ENST00000518538 KCNK6Q9Y257 313 aa21.7■■□□□ 1.06
VEGFA-217ENST00000518538 TRBV5-4A0A0C4DH59 114 aa21.69■■□□□ 1.06
VEGFA-217ENST00000518538 TMEM63AO94886 807 aa21.69■■□□□ 1.06
VEGFA-217ENST00000518538 TOP3BO95985 862 aaKnown RBP21.69■■□□□ 1.06
VEGFA-217ENST00000518538 ZNF7P17097 686 aaPredicted RBP21.69■■□□□ 1.06
VEGFA-217ENST00000518538 AKT1P31749 480 aa21.69■■□□□ 1.06
VEGFA-217ENST00000518538 PTGIRP43119 386 aa21.69■■□□□ 1.06
VEGFA-217ENST00000518538 CLCNKAP51800 687 aa21.69■■□□□ 1.06
VEGFA-217ENST00000518538 CACNG1Q06432 222 aa21.69■■□□□ 1.06
VEGFA-217ENST00000518538 HLTFQ14527 1009 aaKnown RBP eCLIP21.69■■□□□ 1.06
VEGFA-217ENST00000518538 SMAD1Q15797 465 aaKnown RBP21.69■■□□□ 1.06
VEGFA-217ENST00000518538 ZRANB3Q5FWF4 1079 aa21.69■■□□□ 1.06
VEGFA-217ENST00000518538 SYDE1Q6ZW31 735 aaPredicted RBP21.69■■□□□ 1.06
VEGFA-217ENST00000518538 TRAPPC5Q8IUR0 188 aa21.69■■□□□ 1.06
VEGFA-217ENST00000518538 SFTPA2Q8IWL1 248 aa21.69■■□□□ 1.06
VEGFA-217ENST00000518538 RASGEF1AQ8N9B8 481 aa21.69■■□□□ 1.06
VEGFA-217ENST00000518538 MCUQ8NE86 351 aa21.69■■□□□ 1.06
VEGFA-217ENST00000518538 TRIM44Q96DX7 344 aaPredicted RBP21.69■■□□□ 1.06
VEGFA-217ENST00000518538 C16orf45Q96MC5 204 aaPredicted RBP21.69■■□□□ 1.06
VEGFA-217ENST00000518538 ZNF778Q96MU6 729 aa21.69■■□□□ 1.06
VEGFA-217ENST00000518538 TIMM29Q9BSF4 260 aa21.69■■□□□ 1.06
VEGFA-217ENST00000518538 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.69■■□□□ 1.06
VEGFA-217ENST00000518538 SLC2A6Q9UGQ3 507 aa21.69■■□□□ 1.06
VEGFA-217ENST00000518538 ASIC3Q9UHC3 531 aa21.69■■□□□ 1.06
VEGFA-217ENST00000518538 ANGPTL2Q9UKU9 493 aa21.69■■□□□ 1.06
VEGFA-217ENST00000518538 PLXNB3Q9ULL4 1909 aa21.68■■□□□ 1.06
VEGFA-217ENST00000518538 SPTBN2O15020 2390 aa21.68■■□□□ 1.06
VEGFA-217ENST00000518538 MLNP12872 115 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms