RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 SYCP3Q8IZU3 236 aa3.12□□□□□ -1.91
SCARNA13-201ENST00000516672 STK40Q8N2I9 435 aa3.12□□□□□ -1.91
SCARNA13-201ENST00000516672 MLKLQ8NB16 471 aa3.12□□□□□ -1.91
SCARNA13-201ENST00000516672 XXYLT1Q8NBI6 393 aa3.12□□□□□ -1.91
SCARNA13-201ENST00000516672 ADAMTS15Q8TE58 950 aa3.12□□□□□ -1.91
SCARNA13-201ENST00000516672 WFIKKN2Q8TEU8 576 aa3.12□□□□□ -1.91
SCARNA13-201ENST00000516672 IGFBPL1Q8WX77 278 aa3.12□□□□□ -1.91
SCARNA13-201ENST00000516672 POMGNT1Q8WZA1 660 aa3.12□□□□□ -1.91
SCARNA13-201ENST00000516672 SMPDL3BQ92485 455 aa3.12□□□□□ -1.91
SCARNA13-201ENST00000516672 ERCC4Q92889 916 aaPredicted RBP3.12□□□□□ -1.91
SCARNA13-201ENST00000516672 SMARCE1Q969G3 411 aa3.12□□□□□ -1.91
SCARNA13-201ENST00000516672 PPP1R14AQ96A00 147 aa3.12□□□□□ -1.91
SCARNA13-201ENST00000516672 BICD1Q96G01 975 aa3.12□□□□□ -1.91
SCARNA13-201ENST00000516672 DHTKD1Q96HY7 919 aaPredicted RBP3.12□□□□□ -1.91
SCARNA13-201ENST00000516672 BTBD9Q96Q07 612 aa3.12□□□□□ -1.91
SCARNA13-201ENST00000516672 MSTO1Q9BUK6 570 aa3.12□□□□□ -1.91
SCARNA13-201ENST00000516672 KIFC3Q9BVG8 833 aa3.12□□□□□ -1.91
SCARNA13-201ENST00000516672 KLF16Q9BXK1 252 aaPredicted RBP3.12□□□□□ -1.91
SCARNA13-201ENST00000516672 TRIM54Q9BYV2 358 aa3.12□□□□□ -1.91
SCARNA13-201ENST00000516672 BHLHE41Q9C0J9 482 aaPredicted RBP3.12□□□□□ -1.91
SCARNA13-201ENST00000516672 HSD3B7Q9H2F3 369 aa3.12□□□□□ -1.91
SCARNA13-201ENST00000516672 KCTD10Q9H3F6 313 aa3.12□□□□□ -1.91
SCARNA13-201ENST00000516672 ZHX3Q9H4I2 956 aa3.12□□□□□ -1.91
SCARNA13-201ENST00000516672 CXorf56Q9H5V9 222 aa3.12□□□□□ -1.91
SCARNA13-201ENST00000516672 CCSER2Q9H7U1 834 aa3.12□□□□□ -1.91
SCARNA13-201ENST00000516672 AGPAT3Q9NRZ7 376 aa3.12□□□□□ -1.91
SCARNA13-201ENST00000516672 PSD3Q9NYI0 1048 aa3.12□□□□□ -1.91
SCARNA13-201ENST00000516672 EHD2Q9NZN4 543 aa3.12□□□□□ -1.91
SCARNA13-201ENST00000516672 KIAA1468Q9P260 1216 aa3.12□□□□□ -1.91
SCARNA13-201ENST00000516672 SFMBT1Q9UHJ3 866 aa3.12□□□□□ -1.91
SCARNA13-201ENST00000516672 LSM7Q9UK45 103 aaKnown RBP3.12□□□□□ -1.91
SCARNA13-201ENST00000516672 AGO2Q9UKV8 859 aaKnown RBP3.12□□□□□ -1.91
SCARNA13-201ENST00000516672 TCFL5Q9UL49 500 aa3.12□□□□□ -1.91
SCARNA13-201ENST00000516672 ZFR2Q9UPR6 939 aaKnown RBP3.12□□□□□ -1.91
SCARNA13-201ENST00000516672 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.12□□□□□ -1.91
SCARNA13-201ENST00000516672 HRH3Q9Y5N1 445 aa3.12□□□□□ -1.91
SCARNA13-201ENST00000516672 DSCAMO60469 2012 aa3.12□□□□□ -1.91
SCARNA13-201ENST00000516672 DNAJC13O75165 2243 aa3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 IGHV1OR21-1A0A087WYE8 117 aa3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 TRAV17A0A0B4J275 112 aa3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 BICDL2A1A5D9 508 aa3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 ERICH4A6NGS2 130 aa3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 RASA4BC9J798 803 aa3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 ANKRD63C9JTQ0 380 aa3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 NPIPA5E9PKD4 350 aa3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 H3BQF6 201 aa3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 KIF2AO00139 706 aaPredicted RBP3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 PIRO00625 290 aa3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 CETN3O15182 167 aa3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 MATN3O15232 486 aa3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 SLC16A3O15427 465 aaKnown RBP3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 RASA4O43374 803 aa3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 STX10O60499 249 aa3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 STAU1O95793 577 aaKnown RBP3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 GNA14O95837 355 aa3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 ATP5BP06576 529 aaKnown RBP3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 TLX1P31314 330 aaPredicted RBP3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 OTX2P32243 289 aa3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 HOXD13P35453 343 aa3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 PSMC2P35998 433 aaKnown RBP3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 MAGEA11P43364 429 aa3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 ZFP36L2P47974 494 aaKnown RBP3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 KCNC1P48547 511 aa3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 PPM1FP49593 454 aaPredicted RBP3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 ZNF165P49910 485 aa3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 CASP5P51878 434 aa3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 CTSCP53634 463 aa3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 MARSP56192 900 aaKnown RBP3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 MAZP56270 477 aaKnown RBP3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 NOP14P78316 857 aaKnown RBP3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 ARG2P78540 354 aa3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 FKBP3Q00688 224 aaKnown RBP3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 LOXL1Q08397 574 aaPredicted RBP3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 KCNA1Q09470 495 aa3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 OLIG2Q13516 323 aa3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 PSMD6Q15008 389 aa3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 SNRNP35Q16560 246 aaKnown RBP3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 CAMK4Q16566 473 aa3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 STX1AQ16623 288 aa3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 TPD52L1Q16890 204 aaPredicted RBP3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 DUOXA2Q1HG44 320 aa3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 ERCC6LQ2NKX8 1250 aa3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 ZCWPW2Q504Y3 356 aa3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 EFHC1Q5JVL4 640 aa3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 OTUD1Q5VV17 481 aaPredicted RBP3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 SPATA1Q5VX52 437 aa3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 IZUMO3Q5VZ72 239 aa3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 WSCD1Q658N2 575 aa3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 SEL1L3Q68CR1 1132 aa3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 ASPHD2Q6ICH7 369 aa3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 SLC39A4Q6P5W5 647 aa3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 DNM1P46Q6ZS02 220 aa3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 PLEKHM3Q6ZWE6 761 aa3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 INTS8Q75QN2 995 aaKnown RBP3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 DPH6Q7L8W6 267 aa3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 WDR53Q7Z5U6 358 aaPredicted RBP3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 MRGPREQ86SM8 312 aa3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 SLC13A5Q86YT5 568 aaPredicted RBP3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 TMEM139Q8IV31 216 aa3.11□□□□□ -1.91
SCARNA13-201ENST00000516672 BRSK2Q8IWQ3 736 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms