RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 UBXN4Q92575 508 aa-1.05□□□□□ -2.58
RNU6-539P-201ENST00000516665 TADA1Q96BN2 335 aa-1.05□□□□□ -2.58
RNU6-539P-201ENST00000516665 FAR2Q96K12 515 aa-1.05□□□□□ -2.58
RNU6-539P-201ENST00000516665 PRMT6Q96LA8 375 aaPredicted RBP-1.05□□□□□ -2.58
RNU6-539P-201ENST00000516665 ZSCAN31Q96LW9 406 aaPredicted RBP-1.05□□□□□ -2.58
RNU6-539P-201ENST00000516665 TEFMQ96QE5 360 aaKnown RBP-1.05□□□□□ -2.58
RNU6-539P-201ENST00000516665 APOL2Q9BQE5 337 aa-1.05□□□□□ -2.58
RNU6-539P-201ENST00000516665 ZNF2Q9BSG1 426 aaPredicted RBP-1.05□□□□□ -2.58
RNU6-539P-201ENST00000516665 DEFB126Q9BYW3 111 aa-1.05□□□□□ -2.58
RNU6-539P-201ENST00000516665 GLIS2Q9BZE0 524 aaPredicted RBP-1.05□□□□□ -2.58
RNU6-539P-201ENST00000516665 CXorf56Q9H5V9 222 aa-1.05□□□□□ -2.58
RNU6-539P-201ENST00000516665 ATP13A3Q9H7F0 1226 aa-1.05□□□□□ -2.58
RNU6-539P-201ENST00000516665 VEZTQ9HBM0 779 aa-1.05□□□□□ -2.58
RNU6-539P-201ENST00000516665 NMRK2Q9NPI5 230 aa-1.05□□□□□ -2.58
RNU6-539P-201ENST00000516665 MKS1Q9NXB0 559 aa-1.05□□□□□ -2.58
RNU6-539P-201ENST00000516665 VNN3Q9NY84 501 aa-1.05□□□□□ -2.58
RNU6-539P-201ENST00000516665 GRID1Q9ULK0 1009 aa-1.05□□□□□ -2.58
RNU6-539P-201ENST00000516665 THRAP3Q9Y2W1 955 aaKnown RBP-1.05□□□□□ -2.58
RNU6-539P-201ENST00000516665 RABGAP1Q9Y3P9 1069 aa-1.05□□□□□ -2.58
RNU6-539P-201ENST00000516665 LTBP4Q8N2S1 1624 aa-1.06□□□□□ -2.58
RNU6-539P-201ENST00000516665 LOC105369274A0A096LPK9 316 aa-1.06□□□□□ -2.58
RNU6-539P-201ENST00000516665 LOC102723532A0A0G2JNH3 316 aa-1.06□□□□□ -2.58
RNU6-539P-201ENST00000516665 A8MV72 311 aaPredicted RBP-1.06□□□□□ -2.58
RNU6-539P-201ENST00000516665 USP17L23D6RBM5 183 aa-1.06□□□□□ -2.58
RNU6-539P-201ENST00000516665 DHHO43323 396 aa-1.06□□□□□ -2.58
RNU6-539P-201ENST00000516665 SNAP91O60641 907 aa-1.06□□□□□ -2.58
RNU6-539P-201ENST00000516665 PDE8AO60658 829 aa-1.06□□□□□ -2.58
RNU6-539P-201ENST00000516665 ZRANB2O95218 330 aaKnown RBP eCLIP-1.06□□□□□ -2.58
RNU6-539P-201ENST00000516665 FAM200BP0CF97 657 aa-1.06□□□□□ -2.58
RNU6-539P-201ENST00000516665 GPX3P22352 226 aa-1.06□□□□□ -2.58
RNU6-539P-201ENST00000516665 COL8A2P25067 703 aa-1.06□□□□□ -2.58
RNU6-539P-201ENST00000516665 TTKP33981 857 aa-1.06□□□□□ -2.58
RNU6-539P-201ENST00000516665 MAGEA11P43364 429 aa-1.06□□□□□ -2.58
RNU6-539P-201ENST00000516665 PRELPP51888 382 aa-1.06□□□□□ -2.58
RNU6-539P-201ENST00000516665 CTSCP53634 463 aa-1.06□□□□□ -2.58
RNU6-539P-201ENST00000516665 FAM3BP58499 235 aaPredicted RBP-1.06□□□□□ -2.58
RNU6-539P-201ENST00000516665 GNB2P62879 340 aa-1.06□□□□□ -2.58
RNU6-539P-201ENST00000516665 CDR2Q01850 454 aa-1.06□□□□□ -2.58
RNU6-539P-201ENST00000516665 SLC18A2Q05940 514 aa-1.06□□□□□ -2.58
RNU6-539P-201ENST00000516665 FGL2Q14314 439 aa-1.06□□□□□ -2.58
RNU6-539P-201ENST00000516665 PTGES3Q15185 160 aaKnown RBP-1.06□□□□□ -2.58
RNU6-539P-201ENST00000516665 SMAD1Q15797 465 aaKnown RBP-1.06□□□□□ -2.58
RNU6-539P-201ENST00000516665 ZACNQ401N2 412 aa-1.06□□□□□ -2.58
RNU6-539P-201ENST00000516665 MMEL1Q495T6 779 aa-1.06□□□□□ -2.58
RNU6-539P-201ENST00000516665 LINC00242Q5T6M2 205 aa-1.06□□□□□ -2.58
RNU6-539P-201ENST00000516665 ANKRD40Q6AI12 368 aa-1.06□□□□□ -2.58
RNU6-539P-201ENST00000516665 TTI2Q6NXR4 508 aa-1.06□□□□□ -2.58
RNU6-539P-201ENST00000516665 MTFR2Q6P444 385 aa-1.06□□□□□ -2.58
RNU6-539P-201ENST00000516665 PLXDC2Q6UX71 529 aa-1.06□□□□□ -2.58
RNU6-539P-201ENST00000516665 CDHR3Q6ZTQ4 885 aa-1.06□□□□□ -2.58
RNU6-539P-201ENST00000516665 USP45Q70EL2 814 aa-1.06□□□□□ -2.58
RNU6-539P-201ENST00000516665 G2E3Q7L622 706 aa-1.06□□□□□ -2.58
RNU6-539P-201ENST00000516665 CHST15Q7LFX5 561 aaPredicted RBP-1.06□□□□□ -2.58
RNU6-539P-201ENST00000516665 MYOCDQ8IZQ8 938 aa-1.06□□□□□ -2.58
RNU6-539P-201ENST00000516665 OR4N4Q8N0Y3 316 aa-1.06□□□□□ -2.58
RNU6-539P-201ENST00000516665 ZNF786Q8N393 782 aa-1.06□□□□□ -2.58
RNU6-539P-201ENST00000516665 MYRIPQ8NFW9 859 aa-1.06□□□□□ -2.58
RNU6-539P-201ENST00000516665 OR2L5Q8NG80 312 aa-1.06□□□□□ -2.58
RNU6-539P-201ENST00000516665 SLC47A1Q96FL8 570 aa-1.06□□□□□ -2.58
RNU6-539P-201ENST00000516665 ZNF578Q96N58 590 aaPredicted RBP-1.06□□□□□ -2.58
RNU6-539P-201ENST00000516665 PAAF1Q9BRP4 392 aa-1.06□□□□□ -2.58
RNU6-539P-201ENST00000516665 KCNN2Q9H2S1 579 aa-1.06□□□□□ -2.58
RNU6-539P-201ENST00000516665 PTTG2Q9NZH5 202 aa-1.06□□□□□ -2.58
RNU6-539P-201ENST00000516665 RGS17Q9UGC6 210 aaPredicted RBP-1.06□□□□□ -2.58
RNU6-539P-201ENST00000516665 PHF11Q9UIL8 331 aa-1.06□□□□□ -2.58
RNU6-539P-201ENST00000516665 RAB21Q9UL25 225 aa-1.06□□□□□ -2.58
RNU6-539P-201ENST00000516665 ZNF835Q9Y2P0 537 aa-1.06□□□□□ -2.58
RNU6-539P-201ENST00000516665 PAXBP1Q9Y5B6 917 aa-1.06□□□□□ -2.58
RNU6-539P-201ENST00000516665 SHANK1Q9Y566 2161 aa-1.06□□□□□ -2.58
RNU6-539P-201ENST00000516665 COL6A6A6NMZ7 2263 aa-1.06□□□□□ -2.58
RNU6-539P-201ENST00000516665 GTF3C1Q12789 2109 aa-1.07□□□□□ -2.58
RNU6-539P-201ENST00000516665 PTPRCP08575 1304 aa-1.07□□□□□ -2.58
RNU6-539P-201ENST00000516665 VWA3AA6NCI4 1184 aa-1.07□□□□□ -2.58
RNU6-539P-201ENST00000516665 TMEM8BA6NDV4 472 aa-1.07□□□□□ -2.58
RNU6-539P-201ENST00000516665 TMEM247A6NEH6 219 aa-1.07□□□□□ -2.58
RNU6-539P-201ENST00000516665 TNFSF11O14788 317 aa-1.07□□□□□ -2.58
RNU6-539P-201ENST00000516665 IGSF3O75054 1194 aa-1.07□□□□□ -2.58
RNU6-539P-201ENST00000516665 INMTO95050 263 aa-1.07□□□□□ -2.58
RNU6-539P-201ENST00000516665 PNPP00491 289 aa-1.07□□□□□ -2.58
RNU6-539P-201ENST00000516665 RENP00797 406 aa-1.07□□□□□ -2.58
RNU6-539P-201ENST00000516665 GPIP06744 558 aa-1.07□□□□□ -2.58
RNU6-539P-201ENST00000516665 CGB3P0DN86 165 aa-1.07□□□□□ -2.58
RNU6-539P-201ENST00000516665 G6PDP11413 515 aa-1.07□□□□□ -2.58
RNU6-539P-201ENST00000516665 CPN1P15169 458 aa-1.07□□□□□ -2.58
RNU6-539P-201ENST00000516665 MCCP23508 829 aa-1.07□□□□□ -2.58
RNU6-539P-201ENST00000516665 PAX9P55771 341 aa-1.07□□□□□ -2.58
RNU6-539P-201ENST00000516665 PLIN5Q00G26 463 aa-1.07□□□□□ -2.58
RNU6-539P-201ENST00000516665 OS9Q13438 667 aaPredicted RBP-1.07□□□□□ -2.58
RNU6-539P-201ENST00000516665 EIF2S3LQ2VIR3 472 aaKnown RBP-1.07□□□□□ -2.58
RNU6-539P-201ENST00000516665 PLEKHG6Q3KR16 790 aa-1.07□□□□□ -2.58
RNU6-539P-201ENST00000516665 IQCCQ4KMZ1 466 aa-1.07□□□□□ -2.58
RNU6-539P-201ENST00000516665 C3orf38Q5JPI3 329 aa-1.07□□□□□ -2.58
RNU6-539P-201ENST00000516665 ANKRD54Q6NXT1 300 aa-1.07□□□□□ -2.58
RNU6-539P-201ENST00000516665 DARS2Q6PI48 645 aaKnown RBP-1.07□□□□□ -2.58
RNU6-539P-201ENST00000516665 SLC25A34Q6PIV7 304 aa-1.07□□□□□ -2.58
RNU6-539P-201ENST00000516665 SASS6Q6UVJ0 657 aa-1.07□□□□□ -2.58
RNU6-539P-201ENST00000516665 DDX46Q7L014 1031 aaKnown RBP-1.07□□□□□ -2.58
RNU6-539P-201ENST00000516665 DENND1CQ8IV53 801 aa-1.07□□□□□ -2.58
RNU6-539P-201ENST00000516665 ZNF615Q8N8J6 731 aa-1.07□□□□□ -2.58
RNU6-539P-201ENST00000516665 TMEM116Q8NCL8 245 aa-1.07□□□□□ -2.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms