RNA–Protein interactions for RNA: ENST00000516414.1

RNU6-1049P-201, Transcript of RNA, U6 small nuclear 1049, pseudogene, humanhuman

BASIC

Gene RNU6-1049P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1049P-201ENST00000516414 PSPC1Q8WXF1 523 aaKnown RBP0.26□□□□□ -2.37
RNU6-1049P-201ENST00000516414 TMEM190Q8WZ59 177 aa0.26□□□□□ -2.37
RNU6-1049P-201ENST00000516414 HTRA1Q92743 480 aa0.26□□□□□ -2.37
RNU6-1049P-201ENST00000516414 PIGTQ969N2 578 aa0.26□□□□□ -2.37
RNU6-1049P-201ENST00000516414 FAM104AQ969W3 186 aa0.26□□□□□ -2.37
RNU6-1049P-201ENST00000516414 TMEM143Q96AN5 459 aa0.26□□□□□ -2.37
RNU6-1049P-201ENST00000516414 ZUFSPQ96AP4 578 aa0.26□□□□□ -2.37
RNU6-1049P-201ENST00000516414 ZNF689Q96CS4 500 aaPredicted RBP0.26□□□□□ -2.37
RNU6-1049P-201ENST00000516414 RNF183Q96D59 192 aa0.26□□□□□ -2.37
RNU6-1049P-201ENST00000516414 HDAC11Q96DB2 347 aa0.26□□□□□ -2.37
RNU6-1049P-201ENST00000516414 FBXO17Q96EF6 278 aa0.26□□□□□ -2.37
RNU6-1049P-201ENST00000516414 PDLIM5Q96HC4 596 aaKnown RBP0.26□□□□□ -2.37
RNU6-1049P-201ENST00000516414 FAR2Q96K12 515 aa0.26□□□□□ -2.37
RNU6-1049P-201ENST00000516414 LRR1Q96L50 414 aa0.26□□□□□ -2.37
RNU6-1049P-201ENST00000516414 PRMT6Q96LA8 375 aaPredicted RBP0.26□□□□□ -2.37
RNU6-1049P-201ENST00000516414 LINC00615Q96LM1 132 aaPredicted RBP0.26□□□□□ -2.37
RNU6-1049P-201ENST00000516414 NEDD4LQ96PU5 975 aa0.26□□□□□ -2.37
RNU6-1049P-201ENST00000516414 PIGSQ96S52 555 aa0.26□□□□□ -2.37
RNU6-1049P-201ENST00000516414 CCT8L2Q96SF2 557 aa0.26□□□□□ -2.37
RNU6-1049P-201ENST00000516414 SIN3AQ96ST3 1273 aa0.26□□□□□ -2.37
RNU6-1049P-201ENST00000516414 ACOX2Q99424 681 aa0.26□□□□□ -2.37
RNU6-1049P-201ENST00000516414 MEIS3Q99687 375 aa0.26□□□□□ -2.37
RNU6-1049P-201ENST00000516414 NPAS1Q99742 590 aa0.26□□□□□ -2.37
RNU6-1049P-201ENST00000516414 RHNO1Q9BSD3 238 aa0.26□□□□□ -2.37
RNU6-1049P-201ENST00000516414 SYT17Q9BSW7 474 aa0.26□□□□□ -2.37
RNU6-1049P-201ENST00000516414 KRTAP4-1Q9BYQ7 146 aa0.26□□□□□ -2.37
RNU6-1049P-201ENST00000516414 TWSG1Q9GZX9 223 aa0.26□□□□□ -2.37
RNU6-1049P-201ENST00000516414 PAIP1Q9H074 479 aaKnown RBP0.26□□□□□ -2.37
RNU6-1049P-201ENST00000516414 ZNF700Q9H0M5 742 aa0.26□□□□□ -2.37
RNU6-1049P-201ENST00000516414 TAOK3Q9H2K8 898 aa0.26□□□□□ -2.37
RNU6-1049P-201ENST00000516414 RAD21L1Q9H4I0 556 aa0.26□□□□□ -2.37
RNU6-1049P-201ENST00000516414 TTC12Q9H892 705 aaPredicted RBP0.26□□□□□ -2.37
RNU6-1049P-201ENST00000516414 EBF2Q9HAK2 575 aa0.26□□□□□ -2.37
RNU6-1049P-201ENST00000516414 UPF2Q9HAU5 1272 aaKnown RBP0.26□□□□□ -2.37
RNU6-1049P-201ENST00000516414 BRF2Q9HAW0 419 aa0.26□□□□□ -2.37
RNU6-1049P-201ENST00000516414 IL1RAPQ9NPH3 570 aa0.26□□□□□ -2.37
RNU6-1049P-201ENST00000516414 NLRC4Q9NPP4 1024 aa0.26□□□□□ -2.37
RNU6-1049P-201ENST00000516414 TRIM36Q9NQ86 728 aa0.26□□□□□ -2.37
RNU6-1049P-201ENST00000516414 G6PC2Q9NQR9 355 aa0.26□□□□□ -2.37
RNU6-1049P-201ENST00000516414 NECTIN3Q9NQS3 549 aa0.26□□□□□ -2.37
RNU6-1049P-201ENST00000516414 PHPT1Q9NRX4 125 aaPredicted RBP0.26□□□□□ -2.37
RNU6-1049P-201ENST00000516414 KRT84Q9NSB2 600 aa0.26□□□□□ -2.37
RNU6-1049P-201ENST00000516414 ABCF3Q9NUQ8 709 aa0.26□□□□□ -2.37
RNU6-1049P-201ENST00000516414 SLC38A7Q9NVC3 462 aa0.26□□□□□ -2.37
RNU6-1049P-201ENST00000516414 INTS10Q9NVR2 710 aaKnown RBP0.26□□□□□ -2.37
RNU6-1049P-201ENST00000516414 ZNF446Q9NWS9 450 aa0.26□□□□□ -2.37
RNU6-1049P-201ENST00000516414 HCFC1R1Q9NWW0 138 aa0.26□□□□□ -2.37
RNU6-1049P-201ENST00000516414 RNF186Q9NXI6 227 aa0.26□□□□□ -2.37
RNU6-1049P-201ENST00000516414 ANKRD10Q9NXR5 420 aa0.26□□□□□ -2.37
RNU6-1049P-201ENST00000516414 GPR83Q9NYM4 423 aa0.26□□□□□ -2.37
RNU6-1049P-201ENST00000516414 C9orf78Q9NZ63 289 aaPredicted RBP0.26□□□□□ -2.37
RNU6-1049P-201ENST00000516414 SMARCAL1Q9NZC9 954 aa0.26□□□□□ -2.37
RNU6-1049P-201ENST00000516414 IL1RAPL1Q9NZN1 696 aa0.26□□□□□ -2.37
RNU6-1049P-201ENST00000516414 SELENONQ9NZV5 590 aa0.26□□□□□ -2.37
RNU6-1049P-201ENST00000516414 MARCH4Q9P2E8 410 aaPredicted RBP0.26□□□□□ -2.37
RNU6-1049P-201ENST00000516414 RCOR3Q9P2K3 495 aaPredicted RBP0.26□□□□□ -2.37
RNU6-1049P-201ENST00000516414 FRMD4AQ9P2Q2 1039 aaPredicted RBP0.26□□□□□ -2.37
RNU6-1049P-201ENST00000516414 ZNF69Q9UC07 566 aa0.26□□□□□ -2.37
RNU6-1049P-201ENST00000516414 HERC5Q9UII4 1024 aaKnown RBP0.26□□□□□ -2.37
RNU6-1049P-201ENST00000516414 ZNF112Q9UJU3 913 aa0.26□□□□□ -2.37
RNU6-1049P-201ENST00000516414 MTUS1Q9ULD2 1270 aa0.26□□□□□ -2.37
RNU6-1049P-201ENST00000516414 C19orf53Q9UNZ5 99 aaPredicted RBP0.26□□□□□ -2.37
RNU6-1049P-201ENST00000516414 DHDHQ9UQ10 334 aa0.26□□□□□ -2.37
RNU6-1049P-201ENST00000516414 NTNG1Q9Y2I2 539 aa0.26□□□□□ -2.37
RNU6-1049P-201ENST00000516414 SLC45A1Q9Y2W3 748 aa0.26□□□□□ -2.37
RNU6-1049P-201ENST00000516414 DERAQ9Y315 318 aa0.26□□□□□ -2.37
RNU6-1049P-201ENST00000516414 TMED3Q9Y3Q3 217 aa0.26□□□□□ -2.37
RNU6-1049P-201ENST00000516414 ZHX2Q9Y6X8 837 aa0.26□□□□□ -2.37
RNU6-1049P-201ENST00000516414 NEDD4P46934 1319 aa0.26□□□□□ -2.37
RNU6-1049P-201ENST00000516414 ATXN2Q99700 1313 aaKnown RBP0.26□□□□□ -2.37
RNU6-1049P-201ENST00000516414 HCFC1P51610 2035 aa0.25□□□□□ -2.37
RNU6-1049P-201ENST00000516414 MEGF6O75095 1541 aa0.25□□□□□ -2.37
RNU6-1049P-201ENST00000516414 PTPRCP08575 1304 aa0.25□□□□□ -2.37
RNU6-1049P-201ENST00000516414 SALL1Q9NSC2 1324 aa0.25□□□□□ -2.37
RNU6-1049P-201ENST00000516414 ZCWPW2A0A1B0GU75 182 aa0.25□□□□□ -2.37
RNU6-1049P-201ENST00000516414 A0A1W2PPM1 405 aa0.25□□□□□ -2.37
RNU6-1049P-201ENST00000516414 A0A1W2PPR1 153 aa0.25□□□□□ -2.37
RNU6-1049P-201ENST00000516414 FRMD3A2A2Y4 597 aa0.25□□□□□ -2.37
RNU6-1049P-201ENST00000516414 ZNF840PA6NDX5 716 aa0.25□□□□□ -2.37
RNU6-1049P-201ENST00000516414 OR5K3A6NET4 321 aa0.25□□□□□ -2.37
RNU6-1049P-201ENST00000516414 GOLGA6L3A6NEY3 463 aa0.25□□□□□ -2.37
RNU6-1049P-201ENST00000516414 RRN3P2A6NIE6 340 aa0.25□□□□□ -2.37
RNU6-1049P-201ENST00000516414 TEX22C9J3V5 150 aa0.25□□□□□ -2.37
RNU6-1049P-201ENST00000516414 NPIPB9F8W1W9 429 aa0.25□□□□□ -2.37
RNU6-1049P-201ENST00000516414 M0QZ24 198 aa0.25□□□□□ -2.37
RNU6-1049P-201ENST00000516414 SAP18O00422 153 aaKnown RBP0.25□□□□□ -2.37
RNU6-1049P-201ENST00000516414 KIF3BO15066 747 aa0.25□□□□□ -2.37
RNU6-1049P-201ENST00000516414 TO15178 435 aa0.25□□□□□ -2.37
RNU6-1049P-201ENST00000516414 ADAMDEC1O15204 470 aa0.25□□□□□ -2.37
RNU6-1049P-201ENST00000516414 RTL8CO15255 209 aa0.25□□□□□ -2.37
RNU6-1049P-201ENST00000516414 SLC16A5O15375 505 aa0.25□□□□□ -2.37
RNU6-1049P-201ENST00000516414 RNMTO43148 476 aaKnown RBP0.25□□□□□ -2.37
RNU6-1049P-201ENST00000516414 MLNRO43193 412 aa0.25□□□□□ -2.37
RNU6-1049P-201ENST00000516414 ZNHIT1O43257 154 aa0.25□□□□□ -2.37
RNU6-1049P-201ENST00000516414 STRNO43815 780 aa0.25□□□□□ -2.37
RNU6-1049P-201ENST00000516414 DOK2O60496 412 aa0.25□□□□□ -2.37
RNU6-1049P-201ENST00000516414 PRKRAO75569 313 aaKnown RBP0.25□□□□□ -2.37
RNU6-1049P-201ENST00000516414 CREG1O75629 220 aa0.25□□□□□ -2.37
RNU6-1049P-201ENST00000516414 OR2C1O95371 312 aa0.25□□□□□ -2.37
RNU6-1049P-201ENST00000516414 SGPL1O95470 568 aa0.25□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms