RNA–Protein interactions for RNA: ENST00000515562.1

DDX41-217, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 1,184 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-217ENST00000515562 ADGRG1Q9Y653 693 aa17.28■□□□□ 0.36
DDX41-217ENST00000515562 ATMQ13315 3056 aa17.27■□□□□ 0.36
DDX41-217ENST00000515562 TRBV23OR9-2A0A075B6M9 112 aa17.27■□□□□ 0.36
DDX41-217ENST00000515562 CHUKO15111 745 aa17.27■□□□□ 0.36
DDX41-217ENST00000515562 SNX2O60749 519 aa17.27■□□□□ 0.36
DDX41-217ENST00000515562 EPOP01588 193 aa17.27■□□□□ 0.36
DDX41-217ENST00000515562 BPIP17213 487 aa17.27■□□□□ 0.36
DDX41-217ENST00000515562 NFKB1P19838 968 aa17.27■□□□□ 0.36
DDX41-217ENST00000515562 PPP2R5EQ16537 467 aa17.27■□□□□ 0.36
DDX41-217ENST00000515562 MANEAQ5SRI9 462 aa17.27■□□□□ 0.36
DDX41-217ENST00000515562 FAM182AQ5T1J6 154 aa17.27■□□□□ 0.36
DDX41-217ENST00000515562 KIAA1614Q5VZ46 1190 aa17.27■□□□□ 0.36
DDX41-217ENST00000515562 ADGRG6Q86SQ4 1221 aa17.27■□□□□ 0.36
DDX41-217ENST00000515562 ZC3H18Q86VM9 953 aaKnown RBP17.27■□□□□ 0.36
DDX41-217ENST00000515562 ZFAND4Q86XD8 727 aa17.27■□□□□ 0.36
DDX41-217ENST00000515562 ZNF843Q8N446 348 aa17.27■□□□□ 0.36
DDX41-217ENST00000515562 CALR3Q96L12 384 aaKnown RBP17.27■□□□□ 0.36
DDX41-217ENST00000515562 QKIQ96PU8 341 aaKnown RBP eCLIP17.27■□□□□ 0.36
DDX41-217ENST00000515562 VPS35Q96QK1 796 aa17.27■□□□□ 0.36
DDX41-217ENST00000515562 DDA1Q9BW61 102 aa17.27■□□□□ 0.36
DDX41-217ENST00000515562 OSGEPL1Q9H4B0 414 aa17.27■□□□□ 0.36
DDX41-217ENST00000515562 UBP1Q9NZI7 540 aa17.27■□□□□ 0.36
DDX41-217ENST00000515562 PDP2Q9P2J9 529 aa17.27■□□□□ 0.36
DDX41-217ENST00000515562 SPO11Q9Y5K1 396 aa17.27■□□□□ 0.36
DDX41-217ENST00000515562 LOC285095A0A1B0GVY8 99 aa17.26■□□□□ 0.35
DDX41-217ENST00000515562 HACD1B0YJ81 288 aa17.26■□□□□ 0.35
DDX41-217ENST00000515562 KMOO15229 486 aa17.26■□□□□ 0.35
DDX41-217ENST00000515562 VEGFDO43915 354 aa17.26■□□□□ 0.35
DDX41-217ENST00000515562 FGF3P11487 239 aaPredicted RBP17.26■□□□□ 0.35
DDX41-217ENST00000515562 CD68P34810 354 aaPredicted RBP17.26■□□□□ 0.35
DDX41-217ENST00000515562 HMGCLP35914 325 aa17.26■□□□□ 0.35
DDX41-217ENST00000515562 WNT3AP56704 352 aa17.26■□□□□ 0.35
DDX41-217ENST00000515562 RAB15P59190 212 aa17.26■□□□□ 0.35
DDX41-217ENST00000515562 ADCY2Q08462 1091 aa17.26■□□□□ 0.35
DDX41-217ENST00000515562 NFATC2Q13469 925 aa17.26■□□□□ 0.35
DDX41-217ENST00000515562 LLGL1Q15334 1064 aa17.26■□□□□ 0.35
DDX41-217ENST00000515562 INSCQ1MX18 579 aa17.26■□□□□ 0.35
DDX41-217ENST00000515562 ZDHHC20Q5W0Z9 365 aa17.26■□□□□ 0.35
DDX41-217ENST00000515562 CRTC3Q6UUV7 619 aa17.26■□□□□ 0.35
DDX41-217ENST00000515562 DAAM2Q86T65 1068 aa17.26■□□□□ 0.35
DDX41-217ENST00000515562 LRRTM4Q86VH4 590 aa17.26■□□□□ 0.35
DDX41-217ENST00000515562 HTR3CQ8WXA8 447 aa17.26■□□□□ 0.35
DDX41-217ENST00000515562 SGF29Q96ES7 293 aa17.26■□□□□ 0.35
DDX41-217ENST00000515562 FCRL5Q96RD9 977 aa17.26■□□□□ 0.35
DDX41-217ENST00000515562 TIMM29Q9BSF4 260 aa17.26■□□□□ 0.35
DDX41-217ENST00000515562 ASPSCR1Q9BZE9 553 aa17.26■□□□□ 0.35
DDX41-217ENST00000515562 ARFGAP3Q9NP61 516 aa17.26■□□□□ 0.35
DDX41-217ENST00000515562 KLC4Q9NSK0 619 aa17.26■□□□□ 0.35
DDX41-217ENST00000515562 HACD3Q9P035 362 aa17.26■□□□□ 0.35
DDX41-217ENST00000515562 TMEM9Q9P0T7 183 aa17.26■□□□□ 0.35
DDX41-217ENST00000515562 CPNE7Q9UBL6 633 aa17.26■□□□□ 0.35
DDX41-217ENST00000515562 TRHDEQ9UKU6 1024 aa17.26■□□□□ 0.35
DDX41-217ENST00000515562 LILRA5A6NI73 299 aa17.25■□□□□ 0.35
DDX41-217ENST00000515562 B4E171 279 aa17.25■□□□□ 0.35
DDX41-217ENST00000515562 EFSO43281 561 aa17.25■□□□□ 0.35
DDX41-217ENST00000515562 IPO7O95373 1038 aaKnown RBP17.25■□□□□ 0.35
DDX41-217ENST00000515562 HLA-DPA1P20036 260 aa17.25■□□□□ 0.35
DDX41-217ENST00000515562 MPSTP25325 297 aa17.25■□□□□ 0.35
DDX41-217ENST00000515562 TSPAN7P41732 249 aa17.25■□□□□ 0.35
DDX41-217ENST00000515562 MARCKSL1P49006 195 aa17.25■□□□□ 0.35
DDX41-217ENST00000515562 ATP1A2P50993 1020 aa17.25■□□□□ 0.35
DDX41-217ENST00000515562 ZNF648Q5T619 568 aaPredicted RBP17.25■□□□□ 0.35
DDX41-217ENST00000515562 KDELC1Q6UW63 502 aa17.25■□□□□ 0.35
DDX41-217ENST00000515562 BBS12Q6ZW61 710 aa17.25■□□□□ 0.35
DDX41-217ENST00000515562 FAM129CQ86XR2 697 aa17.25■□□□□ 0.35
DDX41-217ENST00000515562 ZNF567Q8N184 647 aa17.25■□□□□ 0.35
DDX41-217ENST00000515562 ZSCAN1Q8NBB4 408 aa17.25■□□□□ 0.35
DDX41-217ENST00000515562 ART4Q93070 314 aa17.25■□□□□ 0.35
DDX41-217ENST00000515562 HAUS1Q96CS2 278 aa17.25■□□□□ 0.35
DDX41-217ENST00000515562 PANX2Q96RD6 677 aa17.25■□□□□ 0.35
DDX41-217ENST00000515562 UCK1Q9HA47 277 aa17.25■□□□□ 0.35
DDX41-217ENST00000515562 PRDM8Q9NQV8 689 aa17.25■□□□□ 0.35
DDX41-217ENST00000515562 SLC39A1Q9NY26 324 aa17.25■□□□□ 0.35
DDX41-217ENST00000515562 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.25■□□□□ 0.35
DDX41-217ENST00000515562 APOC4-APOC2K7ER74 178 aa17.24■□□□□ 0.35
DDX41-217ENST00000515562 AURKAO14965 403 aa17.24■□□□□ 0.35
DDX41-217ENST00000515562 CDK14O94921 469 aa17.24■□□□□ 0.35
DDX41-217ENST00000515562 APOC2P02655 101 aa17.24■□□□□ 0.35
DDX41-217ENST00000515562 COPS2P61201 443 aa17.24■□□□□ 0.35
DDX41-217ENST00000515562 UBE2IP63279 158 aaKnown RBP17.24■□□□□ 0.35
DDX41-217ENST00000515562 MPP3Q13368 585 aa17.24■□□□□ 0.35
DDX41-217ENST00000515562 XRCC4Q13426 336 aa17.24■□□□□ 0.35
DDX41-217ENST00000515562 GTF2H3Q13889 308 aa17.24■□□□□ 0.35
DDX41-217ENST00000515562 PLA2G4EQ3MJ16 856 aa17.24■□□□□ 0.35
DDX41-217ENST00000515562 SIRPB2Q5JXA9 342 aa17.24■□□□□ 0.35
DDX41-217ENST00000515562 DCAF12Q5T6F0 453 aa17.24■□□□□ 0.35
DDX41-217ENST00000515562 PID1Q7Z2X4 250 aa17.24■□□□□ 0.35
DDX41-217ENST00000515562 GLT6D1Q7Z4J2 308 aa17.24■□□□□ 0.35
DDX41-217ENST00000515562 VASH2Q86V25 355 aa17.24■□□□□ 0.35
DDX41-217ENST00000515562 TRIM48Q8IWZ4 208 aa17.24■□□□□ 0.35
DDX41-217ENST00000515562 DTX3LQ8TDB6 740 aa17.24■□□□□ 0.35
DDX41-217ENST00000515562 NCSTNQ92542 709 aa17.24■□□□□ 0.35
DDX41-217ENST00000515562 KRT35Q92764 455 aa17.24■□□□□ 0.35
DDX41-217ENST00000515562 OXNAD1Q96HP4 312 aaPredicted RBP17.24■□□□□ 0.35
DDX41-217ENST00000515562 MRGPRX2Q96LB1 330 aa17.24■□□□□ 0.35
DDX41-217ENST00000515562 TEFMQ96QE5 360 aaKnown RBP17.24■□□□□ 0.35
DDX41-217ENST00000515562 FERMT1Q9BQL6 677 aa17.24■□□□□ 0.35
DDX41-217ENST00000515562 FSD1LQ9BXM9 530 aa17.24■□□□□ 0.35
DDX41-217ENST00000515562 ZCCHC2Q9C0B9 1178 aaKnown RBP17.24■□□□□ 0.35
DDX41-217ENST00000515562 RSPH14Q9UHP6 348 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 124.4 ms