RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 ASIC2Q16515 512 aa15.53■□□□□ 0.08
LMNA-223ENST00000515459 HIST2H2BCQ6DN03 193 aa15.53■□□□□ 0.08
LMNA-223ENST00000515459 TXNRD3NBQ6F5E7 133 aa15.53■□□□□ 0.08
LMNA-223ENST00000515459 CAPRIN2Q6IMN6 1127 aaKnown RBP15.53■□□□□ 0.08
LMNA-223ENST00000515459 TIGD7Q6NT04 549 aaPredicted RBP15.53■□□□□ 0.08
LMNA-223ENST00000515459 ZNF571Q7Z3V5 609 aaPredicted RBP15.53■□□□□ 0.08
LMNA-223ENST00000515459 APLFQ8IW19 511 aaPredicted RBP15.53■□□□□ 0.08
LMNA-223ENST00000515459 TRIM48Q8IWZ4 208 aa15.53■□□□□ 0.08
LMNA-223ENST00000515459 MAML1Q92585 1016 aa15.53■□□□□ 0.08
LMNA-223ENST00000515459 RBM22Q9NW64 420 aaKnown RBP eCLIP15.53■□□□□ 0.08
LMNA-223ENST00000515459 SCHIP1Q9P0W5 487 aaPredicted RBP15.53■□□□□ 0.08
LMNA-223ENST00000515459 AMACRQ9UHK6 382 aa15.53■□□□□ 0.08
LMNA-223ENST00000515459 PADI1Q9ULC6 663 aa15.53■□□□□ 0.08
LMNA-223ENST00000515459 ADGRG1Q9Y653 693 aa15.53■□□□□ 0.08
LMNA-223ENST00000515459 SLC30A1Q9Y6M5 507 aa15.53■□□□□ 0.08
LMNA-223ENST00000515459 TNRC6AQ8NDV7 1962 aaKnown RBP15.53■□□□□ 0.08
LMNA-223ENST00000515459 MATN3O15232 486 aa15.52■□□□□ 0.08
LMNA-223ENST00000515459 MFSD11O43934 449 aa15.52■□□□□ 0.08
LMNA-223ENST00000515459 SPAG6O75602 509 aa15.52■□□□□ 0.08
LMNA-223ENST00000515459 MTA2O94776 668 aa15.52■□□□□ 0.08
LMNA-223ENST00000515459 PDGFAP04085 211 aa15.52■□□□□ 0.08
LMNA-223ENST00000515459 GNLYP22749 145 aa15.52■□□□□ 0.08
LMNA-223ENST00000515459 CASP14P31944 242 aa15.52■□□□□ 0.08
LMNA-223ENST00000515459 SLC19A1P41440 591 aa15.52■□□□□ 0.08
LMNA-223ENST00000515459 LEPRP48357 1165 aaKnown RBP15.52■□□□□ 0.08
LMNA-223ENST00000515459 GALNT2Q10471 571 aa15.52■□□□□ 0.08
LMNA-223ENST00000515459 SEMA5AQ13591 1074 aa15.52■□□□□ 0.08
LMNA-223ENST00000515459 KRT81Q14533 505 aa15.52■□□□□ 0.08
LMNA-223ENST00000515459 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.52■□□□□ 0.08
LMNA-223ENST00000515459 CCDC122Q5T0U0 273 aa15.52■□□□□ 0.08
LMNA-223ENST00000515459 CYB5D1Q6P9G0 228 aa15.52■□□□□ 0.08
LMNA-223ENST00000515459 PPP1R3BQ86XI6 285 aa15.52■□□□□ 0.08
LMNA-223ENST00000515459 ARRDC2Q8TBH0 407 aa15.52■□□□□ 0.08
LMNA-223ENST00000515459 CPT1CQ8TCG5 803 aa15.52■□□□□ 0.08
LMNA-223ENST00000515459 SEC14L1Q92503 715 aa15.52■□□□□ 0.08
LMNA-223ENST00000515459 OR2AG1Q9H205 316 aa15.52■□□□□ 0.08
LMNA-223ENST00000515459 TRIM39Q9HCM9 518 aa15.52■□□□□ 0.08
LMNA-223ENST00000515459 LHX9Q9NQ69 397 aa15.52■□□□□ 0.08
LMNA-223ENST00000515459 CHMP5Q9NZZ3 219 aa15.52■□□□□ 0.08
LMNA-223ENST00000515459 ZNF624Q9P2J8 865 aaPredicted RBP15.52■□□□□ 0.08
LMNA-223ENST00000515459 RCOR3Q9P2K3 495 aaPredicted RBP15.52■□□□□ 0.08
LMNA-223ENST00000515459 ANKRD66B4E2M5 251 aa15.51■□□□□ 0.07
LMNA-223ENST00000515459 GPR89AB7ZAQ6 455 aa15.51■□□□□ 0.07
LMNA-223ENST00000515459 C21orf140B9A014 251 aa15.51■□□□□ 0.07
LMNA-223ENST00000515459 DDX3XO00571 662 aaKnown RBP eCLIP15.51■□□□□ 0.07
LMNA-223ENST00000515459 DNAJB5O75953 348 aa15.51■□□□□ 0.07
LMNA-223ENST00000515459 SLC25A14O95258 325 aaPredicted RBP15.51■□□□□ 0.07
LMNA-223ENST00000515459 GPR89BP0CG08 455 aa15.51■□□□□ 0.07
LMNA-223ENST00000515459 IL4RP24394 825 aa15.51■□□□□ 0.07
LMNA-223ENST00000515459 CCNCP24863 283 aa15.51■□□□□ 0.07
LMNA-223ENST00000515459 CAPZBP47756 277 aa15.51■□□□□ 0.07
LMNA-223ENST00000515459 SLC25A11Q02978 314 aaKnown RBP15.51■□□□□ 0.07
LMNA-223ENST00000515459 MMRN1Q13201 1228 aa15.51■□□□□ 0.07
LMNA-223ENST00000515459 IFI16Q16666 785 aaKnown RBP15.51■□□□□ 0.07
LMNA-223ENST00000515459 INSCQ1MX18 579 aa15.51■□□□□ 0.07
LMNA-223ENST00000515459 CACHD1Q5VU97 1274 aa15.51■□□□□ 0.07
LMNA-223ENST00000515459 RBM43Q6ZSC3 357 aaKnown RBP15.51■□□□□ 0.07
LMNA-223ENST00000515459 PRSS42Q7Z5A4 293 aa15.51■□□□□ 0.07
LMNA-223ENST00000515459 SSC4DQ8WTU2 575 aa15.51■□□□□ 0.07
LMNA-223ENST00000515459 CT55Q8WUE5 264 aa15.51■□□□□ 0.07
LMNA-223ENST00000515459 KLHL6Q8WZ60 621 aa15.51■□□□□ 0.07
LMNA-223ENST00000515459 FATE1Q969F0 183 aa15.51■□□□□ 0.07
LMNA-223ENST00000515459 ZDHHC12Q96GR4 267 aa15.51■□□□□ 0.07
LMNA-223ENST00000515459 MLPHQ9BV36 600 aaPredicted RBP15.51■□□□□ 0.07
LMNA-223ENST00000515459 SPATA16Q9BXB7 569 aa15.51■□□□□ 0.07
LMNA-223ENST00000515459 ARFGAP3Q9NP61 516 aa15.51■□□□□ 0.07
LMNA-223ENST00000515459 ANO10Q9NW15 660 aa15.51■□□□□ 0.07
LMNA-223ENST00000515459 AIPL1Q9NZN9 384 aa15.51■□□□□ 0.07
LMNA-223ENST00000515459 PDZK1P1A8MUH7 402 aa15.5■□□□□ 0.07
LMNA-223ENST00000515459 CHUKO15111 745 aa15.5■□□□□ 0.07
LMNA-223ENST00000515459 KIF1CO43896 1103 aaKnown RBP15.5■□□□□ 0.07
LMNA-223ENST00000515459 HLA-DQB2P05538 268 aa15.5■□□□□ 0.07
LMNA-223ENST00000515459 PRKCIP41743 596 aa15.5■□□□□ 0.07
LMNA-223ENST00000515459 NIPAL4Q0D2K0 466 aa15.5■□□□□ 0.07
LMNA-223ENST00000515459 KLHL30Q0D2K2 578 aa15.5■□□□□ 0.07
LMNA-223ENST00000515459 PAFAH1B3Q15102 231 aaKnown RBP15.5■□□□□ 0.07
LMNA-223ENST00000515459 SEPT7Q16181 437 aaKnown RBP15.5■□□□□ 0.07
LMNA-223ENST00000515459 QPCTQ16769 361 aa15.5■□□□□ 0.07
LMNA-223ENST00000515459 TDRD12Q587J7 1177 aaKnown RBP15.5■□□□□ 0.07
LMNA-223ENST00000515459 ZNF569Q5MCW4 686 aa15.5■□□□□ 0.07
LMNA-223ENST00000515459 ZNF648Q5T619 568 aaPredicted RBP15.5■□□□□ 0.07
LMNA-223ENST00000515459 CRTC3Q6UUV7 619 aa15.5■□□□□ 0.07
LMNA-223ENST00000515459 SASS6Q6UVJ0 657 aa15.5■□□□□ 0.07
LMNA-223ENST00000515459 NIPA2Q8N8Q9 360 aa15.5■□□□□ 0.07
LMNA-223ENST00000515459 RSC1A1Q92681 617 aa15.5■□□□□ 0.07
LMNA-223ENST00000515459 TSGA13Q96PP4 275 aa15.5■□□□□ 0.07
LMNA-223ENST00000515459 TRIM55Q9BYV6 548 aa15.5■□□□□ 0.07
LMNA-223ENST00000515459 BRD8Q9H0E9 1235 aa15.5■□□□□ 0.07
LMNA-223ENST00000515459 ISCUQ9H1K1 167 aa15.5■□□□□ 0.07
LMNA-223ENST00000515459 HSD3B7Q9H2F3 369 aa15.5■□□□□ 0.07
LMNA-223ENST00000515459 ACTL8Q9H568 366 aa15.5■□□□□ 0.07
LMNA-223ENST00000515459 PDE7BQ9NP56 450 aa15.5■□□□□ 0.07
LMNA-223ENST00000515459 POT1Q9NUX5 634 aa15.5■□□□□ 0.07
LMNA-223ENST00000515459 SLC23A2Q9UGH3 650 aa15.5■□□□□ 0.07
LMNA-223ENST00000515459 KMOO15229 486 aa15.49■□□□□ 0.07
LMNA-223ENST00000515459 CD48P09326 243 aa15.49■□□□□ 0.07
LMNA-223ENST00000515459 ZNF7P17097 686 aaPredicted RBP15.49■□□□□ 0.07
LMNA-223ENST00000515459 NELFEP18615 380 aaKnown RBP15.49■□□□□ 0.07
LMNA-223ENST00000515459 PGDP52209 483 aa15.49■□□□□ 0.07
LMNA-223ENST00000515459 PLA2G4EQ3MJ16 856 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms