RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 FAM96AQ9H5X1 160 aa11.36□□□□□ -0.59
VCAN-212ENST00000515397 POLR1BQ9H9Y6 1135 aa11.36□□□□□ -0.59
VCAN-212ENST00000515397 SCHIP1Q9P0W5 487 aaPredicted RBP11.36□□□□□ -0.59
VCAN-212ENST00000515397 VPS18Q9P253 973 aa11.36□□□□□ -0.59
VCAN-212ENST00000515397 DKK4Q9UBT3 224 aa11.36□□□□□ -0.59
VCAN-212ENST00000515397 CCDC78A2IDD5 438 aa11.35□□□□□ -0.59
VCAN-212ENST00000515397 C5orf60A6NFR6 353 aa11.35□□□□□ -0.59
VCAN-212ENST00000515397 D6RAR5 112 aa11.35□□□□□ -0.59
VCAN-212ENST00000515397 GAPDHSO14556 408 aaPredicted RBP11.35□□□□□ -0.59
VCAN-212ENST00000515397 STX7O15400 261 aaKnown RBP11.35□□□□□ -0.59
VCAN-212ENST00000515397 NUDT21O43809 227 aaKnown RBP11.35□□□□□ -0.59
VCAN-212ENST00000515397 TCEA3O75764 348 aa11.35□□□□□ -0.59
VCAN-212ENST00000515397 TNFSF15O95150 251 aa11.35□□□□□ -0.59
VCAN-212ENST00000515397 RPL10P27635 214 aaKnown RBP11.35□□□□□ -0.59
VCAN-212ENST00000515397 CD1CP29017 333 aa11.35□□□□□ -0.59
VCAN-212ENST00000515397 HMGCLP35914 325 aa11.35□□□□□ -0.59
VCAN-212ENST00000515397 LSSP48449 732 aa11.35□□□□□ -0.59
VCAN-212ENST00000515397 INHBCP55103 352 aa11.35□□□□□ -0.59
VCAN-212ENST00000515397 DCDC1P59894 354 aa11.35□□□□□ -0.59
VCAN-212ENST00000515397 CFHR1Q03591 330 aa11.35□□□□□ -0.59
VCAN-212ENST00000515397 RPS6KA1Q15418 735 aa11.35□□□□□ -0.59
VCAN-212ENST00000515397 TBC1D25Q3MII6 688 aa11.35□□□□□ -0.59
VCAN-212ENST00000515397 PHF19Q5T6S3 580 aa11.35□□□□□ -0.59
VCAN-212ENST00000515397 MEI1Q5TIA1 1274 aa11.35□□□□□ -0.59
VCAN-212ENST00000515397 ZNF574Q6ZN55 896 aaPredicted RBP11.35□□□□□ -0.59
VCAN-212ENST00000515397 ARHGEF18Q6ZSZ5 1173 aa11.35□□□□□ -0.59
VCAN-212ENST00000515397 DET1Q7L5Y6 550 aa11.35□□□□□ -0.59
VCAN-212ENST00000515397 SLC13A5Q86YT5 568 aaPredicted RBP11.35□□□□□ -0.59
VCAN-212ENST00000515397 PHYKPLQ8IUZ5 450 aa11.35□□□□□ -0.59
VCAN-212ENST00000515397 ZNF547Q8IVP9 402 aa11.35□□□□□ -0.59
VCAN-212ENST00000515397 RAVER1Q8IY67 606 aaKnown RBP11.35□□□□□ -0.59
VCAN-212ENST00000515397 TTC13Q8NBP0 860 aa11.35□□□□□ -0.59
VCAN-212ENST00000515397 RCBTB1Q8NDN9 531 aa11.35□□□□□ -0.59
VCAN-212ENST00000515397 OR6C4Q8NGE1 309 aa11.35□□□□□ -0.59
VCAN-212ENST00000515397 OR13C4Q8NGS5 318 aa11.35□□□□□ -0.59
VCAN-212ENST00000515397 SLC35B2Q8TB61 432 aa11.35□□□□□ -0.59
VCAN-212ENST00000515397 FGF11Q92914 225 aa11.35□□□□□ -0.59
VCAN-212ENST00000515397 TBL1YQ9BQ87 522 aa11.35□□□□□ -0.59
VCAN-212ENST00000515397 FERMT1Q9BQL6 677 aa11.35□□□□□ -0.59
VCAN-212ENST00000515397 TSGA10Q9BZW7 698 aa11.35□□□□□ -0.59
VCAN-212ENST00000515397 CARD9Q9H257 536 aa11.35□□□□□ -0.59
VCAN-212ENST00000515397 TMEM9Q9P0T7 183 aa11.35□□□□□ -0.59
VCAN-212ENST00000515397 FKBPLQ9UIM3 349 aa11.35□□□□□ -0.59
VCAN-212ENST00000515397 LHX6Q9UPM6 363 aa11.35□□□□□ -0.59
VCAN-212ENST00000515397 AAR2Q9Y312 384 aaKnown RBP11.35□□□□□ -0.59
VCAN-212ENST00000515397 ITPR1Q14643 2758 aa11.35□□□□□ -0.59
VCAN-212ENST00000515397 FAM208BQ5VWN6 2430 aa11.34□□□□□ -0.59
VCAN-212ENST00000515397 GLYATL1P3A0A0U1RQE8 302 aa11.34□□□□□ -0.59
VCAN-212ENST00000515397 IFNB1P01574 187 aa11.34□□□□□ -0.59
VCAN-212ENST00000515397 CCDC175P0C221 793 aa11.34□□□□□ -0.59
VCAN-212ENST00000515397 ZSCAN5DPP0CG00 497 aa11.34□□□□□ -0.59
VCAN-212ENST00000515397 PRSS56P0CW18 603 aa11.34□□□□□ -0.59
VCAN-212ENST00000515397 ZNF7P17097 686 aaPredicted RBP11.34□□□□□ -0.59
VCAN-212ENST00000515397 ITIH1P19827 911 aa11.34□□□□□ -0.59
VCAN-212ENST00000515397 LPOP22079 712 aaPredicted RBP11.34□□□□□ -0.59
VCAN-212ENST00000515397 RBMS1P29558 406 aaKnown RBP11.34□□□□□ -0.59
VCAN-212ENST00000515397 CXCR5P32302 372 aa11.34□□□□□ -0.59
VCAN-212ENST00000515397 ACTN2P35609 894 aa11.34□□□□□ -0.59
VCAN-212ENST00000515397 SPAM1P38567 509 aa11.34□□□□□ -0.59
VCAN-212ENST00000515397 ETV5P41161 510 aa11.34□□□□□ -0.59
VCAN-212ENST00000515397 MAPK9P45984 424 aa11.34□□□□□ -0.59
VCAN-212ENST00000515397 CTSCP53634 463 aa11.34□□□□□ -0.59
VCAN-212ENST00000515397 DRG2P55039 364 aaKnown RBP11.34□□□□□ -0.59
VCAN-212ENST00000515397 TMEM115Q12893 351 aaPredicted RBP11.34□□□□□ -0.59
VCAN-212ENST00000515397 MSLNQ13421 630 aaPredicted RBP11.34□□□□□ -0.59
VCAN-212ENST00000515397 LRP8Q14114 963 aa11.34□□□□□ -0.59
VCAN-212ENST00000515397 INSCQ1MX18 579 aa11.34□□□□□ -0.59
VCAN-212ENST00000515397 PARP6Q2NL67 630 aa11.34□□□□□ -0.59
VCAN-212ENST00000515397 MAP9Q49MG5 647 aa11.34□□□□□ -0.59
VCAN-212ENST00000515397 SNAP47Q5SQN1 464 aa11.34□□□□□ -0.59
VCAN-212ENST00000515397 SEL1L2Q5TEA6 688 aa11.34□□□□□ -0.59
VCAN-212ENST00000515397 IYDQ6PHW0 289 aa11.34□□□□□ -0.59
VCAN-212ENST00000515397 RAB11FIP2Q7L804 512 aa11.34□□□□□ -0.59
VCAN-212ENST00000515397 SFRP1Q8N474 314 aa11.34□□□□□ -0.59
VCAN-212ENST00000515397 FBXO39Q8N4B4 442 aa11.34□□□□□ -0.59
VCAN-212ENST00000515397 BEND7Q8N7W2 519 aaPredicted RBP11.34□□□□□ -0.59
VCAN-212ENST00000515397 RASGEF1AQ8N9B8 481 aa11.34□□□□□ -0.59
VCAN-212ENST00000515397 GLIS1Q8NBF1 620 aa11.34□□□□□ -0.59
VCAN-212ENST00000515397 CCDC112Q8NEF3 446 aa11.34□□□□□ -0.59
VCAN-212ENST00000515397 ZNF398Q8TD17 642 aa11.34□□□□□ -0.59
VCAN-212ENST00000515397 SLC46A1Q96NT5 459 aa11.34□□□□□ -0.59
VCAN-212ENST00000515397 PLEKHG4BQ96PX9 1271 aa11.34□□□□□ -0.59
VCAN-212ENST00000515397 SRPK1Q96SB4 655 aaKnown RBP11.34□□□□□ -0.59
VCAN-212ENST00000515397 TRABDQ9H4I3 376 aa11.34□□□□□ -0.59
VCAN-212ENST00000515397 ASCL3Q9NQ33 180 aa11.34□□□□□ -0.59
VCAN-212ENST00000515397 RAD18Q9NS91 495 aa11.34□□□□□ -0.59
VCAN-212ENST00000515397 KCNK4Q9NYG8 393 aa11.34□□□□□ -0.59
VCAN-212ENST00000515397 HACD3Q9P035 362 aa11.34□□□□□ -0.59
VCAN-212ENST00000515397 FAM8A1Q9UBU6 413 aa11.34□□□□□ -0.59
VCAN-212ENST00000515397 PISDQ9UG56 409 aa11.34□□□□□ -0.59
VCAN-212ENST00000515397 PKP3Q9Y446 797 aa11.34□□□□□ -0.59
VCAN-212ENST00000515397 AHCTF1Q8WYP5 2266 aa11.34□□□□□ -0.59
VCAN-212ENST00000515397 CACNA1GO43497 2377 aa11.33□□□□□ -0.6
VCAN-212ENST00000515397 IGHV1OR21-1A0A087WYE8 117 aa11.33□□□□□ -0.6
VCAN-212ENST00000515397 CCDC187A0A096LP49 1063 aa11.33□□□□□ -0.6
VCAN-212ENST00000515397 OR2AG2A6NM03 316 aa11.33□□□□□ -0.6
VCAN-212ENST00000515397 C2orf81A6NN90 581 aa11.33□□□□□ -0.6
VCAN-212ENST00000515397 A8MU76 341 aa11.33□□□□□ -0.6
VCAN-212ENST00000515397 LIASO43766 372 aa11.33□□□□□ -0.6
VCAN-212ENST00000515397 CCL4P13236 92 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms