RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 MPPED1O15442 326 aa3.76□□□□□ -1.81
PDLIM5-218ENST00000513341 PFKFB2O60825 505 aa3.76□□□□□ -1.81
PDLIM5-218ENST00000513341 AGFG2O95081 481 aa3.76□□□□□ -1.81
PDLIM5-218ENST00000513341 LATS1O95835 1130 aa3.76□□□□□ -1.81
PDLIM5-218ENST00000513341 DLDP09622 509 aaKnown RBP3.76□□□□□ -1.81
PDLIM5-218ENST00000513341 GIMD1P0DJR0 217 aa3.76□□□□□ -1.81
PDLIM5-218ENST00000513341 FDPSP14324 419 aaKnown RBP3.76□□□□□ -1.81
PDLIM5-218ENST00000513341 GOT1P17174 413 aa3.76□□□□□ -1.81
PDLIM5-218ENST00000513341 KELP23276 732 aa3.76□□□□□ -1.81
PDLIM5-218ENST00000513341 PRKCHP24723 683 aa3.76□□□□□ -1.81
PDLIM5-218ENST00000513341 CD82P27701 267 aa3.76□□□□□ -1.81
PDLIM5-218ENST00000513341 TNFRSF8P28908 595 aa3.76□□□□□ -1.81
PDLIM5-218ENST00000513341 PRPHP41219 470 aa3.76□□□□□ -1.81
PDLIM5-218ENST00000513341 ZNF131P52739 623 aa3.76□□□□□ -1.81
PDLIM5-218ENST00000513341 SLC5A3P53794 718 aa3.76□□□□□ -1.81
PDLIM5-218ENST00000513341 SCAND1P57086 179 aa3.76□□□□□ -1.81
PDLIM5-218ENST00000513341 TFAMQ00059 246 aaKnown RBP3.76□□□□□ -1.81
PDLIM5-218ENST00000513341 TRIM29Q14134 588 aa3.76□□□□□ -1.81
PDLIM5-218ENST00000513341 PDCD1Q15116 288 aa3.76□□□□□ -1.81
PDLIM5-218ENST00000513341 MPPE1Q53F39 396 aa3.76□□□□□ -1.81
PDLIM5-218ENST00000513341 BMP2KLQ5H9B9 411 aa3.76□□□□□ -1.81
PDLIM5-218ENST00000513341 MANEAQ5SRI9 462 aa3.76□□□□□ -1.81
PDLIM5-218ENST00000513341 HYIQ5T013 277 aa3.76□□□□□ -1.81
PDLIM5-218ENST00000513341 TMEM215Q68D42 235 aa3.76□□□□□ -1.81
PDLIM5-218ENST00000513341 SLC9A4Q6AI14 798 aa3.76□□□□□ -1.81
PDLIM5-218ENST00000513341 SLC39A4Q6P5W5 647 aa3.76□□□□□ -1.81
PDLIM5-218ENST00000513341 NCEH1Q6PIU2 408 aa3.76□□□□□ -1.81
PDLIM5-218ENST00000513341 FAM180AQ6UWF9 173 aa3.76□□□□□ -1.81
PDLIM5-218ENST00000513341 LAYNQ6UX15 382 aa3.76□□□□□ -1.81
PDLIM5-218ENST00000513341 TECPR1Q7Z6L1 1165 aa3.76□□□□□ -1.81
PDLIM5-218ENST00000513341 DRC7Q8IY82 874 aa3.76□□□□□ -1.81
PDLIM5-218ENST00000513341 MYCT1Q8N699 235 aa3.76□□□□□ -1.81
PDLIM5-218ENST00000513341 SSC4DQ8WTU2 575 aa3.76□□□□□ -1.81
PDLIM5-218ENST00000513341 WBP2Q969T9 261 aa3.76□□□□□ -1.81
PDLIM5-218ENST00000513341 HVCN1Q96D96 273 aa3.76□□□□□ -1.81
PDLIM5-218ENST00000513341 ATXN7L3BQ96GX2 97 aa3.76□□□□□ -1.81
PDLIM5-218ENST00000513341 HPDLQ96IR7 371 aa3.76□□□□□ -1.81
PDLIM5-218ENST00000513341 CATSPER2Q96P56 530 aa3.76□□□□□ -1.81
PDLIM5-218ENST00000513341 OMDQ99983 421 aa3.76□□□□□ -1.81
PDLIM5-218ENST00000513341 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.76□□□□□ -1.81
PDLIM5-218ENST00000513341 ASPSCR1Q9BZE9 553 aa3.76□□□□□ -1.81
PDLIM5-218ENST00000513341 SLC13A1Q9BZW2 595 aa3.76□□□□□ -1.81
PDLIM5-218ENST00000513341 CIPCQ9C0C6 399 aa3.76□□□□□ -1.81
PDLIM5-218ENST00000513341 NEUROG2Q9H2A3 272 aa3.76□□□□□ -1.81
PDLIM5-218ENST00000513341 PABPC3Q9H361 631 aaKnown RBP3.76□□□□□ -1.81
PDLIM5-218ENST00000513341 SNX25Q9H3E2 840 aa3.76□□□□□ -1.81
PDLIM5-218ENST00000513341 PARVGQ9HBI0 331 aa3.76□□□□□ -1.81
PDLIM5-218ENST00000513341 METTL14Q9HCE5 456 aaKnown RBP3.76□□□□□ -1.81
PDLIM5-218ENST00000513341 PLK2Q9NYY3 685 aa3.76□□□□□ -1.81
PDLIM5-218ENST00000513341 CLIC5Q9NZA1 410 aa3.76□□□□□ -1.81
PDLIM5-218ENST00000513341 PRSS50Q9UI38 385 aa3.76□□□□□ -1.81
PDLIM5-218ENST00000513341 TBC1D30Q9Y2I9 924 aa3.76□□□□□ -1.81
PDLIM5-218ENST00000513341 CSNK1G3Q9Y6M4 447 aa3.76□□□□□ -1.81
PDLIM5-218ENST00000513341 SPENQ96T58 3664 aaKnown RBP3.76□□□□□ -1.81
PDLIM5-218ENST00000513341 CRYBG3Q68DQ2 2970 aa3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 CSMD1Q96PZ7 3565 aa3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 NF1P21359 2839 aa3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 TBC1D3DA0A087WVF3 549 aa3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 TBC1D3IA0A087WXS9 549 aa3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 TBC1D3EA0A087X179 549 aa3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 TBC1D3KA0A087X1G2 549 aa3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 TBC1D3FA6NER0 549 aaPredicted RBP3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 FAM47DPA6NHR8 397 aa3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 A8MXQ7 604 aa3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 CXorf49A8MYA2 514 aaPredicted RBP3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 TBC1D3LB9A6J9 549 aa3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 ANKRD63C9JTQ0 380 aa3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 SLC7A4O43246 635 aa3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 PROM1O43490 865 aa3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 VPS4BO75351 444 aa3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 KATNA1O75449 491 aa3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 RNASEH2AO75792 299 aaKnown RBP3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 PIAS2O75928 621 aa3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 TBX18O95935 607 aa3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 KRT19P08727 400 aa3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 TMEM191BP0C7N4 346 aa3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 TBC1D3HP0C7X1 549 aa3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 PLA2G4BP0C869 781 aa3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 IRF1P10914 325 aa3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 C5AR1P21730 350 aa3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 TGM2P21980 687 aa3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 SLC5A2P31639 672 aa3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 SLC6A4P31645 630 aa3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 SLC8A1P32418 973 aa3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 GRIA3P42263 894 aa3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 GPR3P46089 330 aa3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 SLC12A3P55017 1021 aa3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 ST8SIA6P61647 398 aa3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 HNRNPKP61978 463 aaKnown RBP eCLIP3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 PSMC1P62191 440 aaKnown RBP3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 KLRB1Q12918 225 aa3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 STK3Q13188 491 aa3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 ZNF177Q13360 481 aaPredicted RBP3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 KLF9Q13886 244 aaPredicted RBP3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 CLCA4Q14CN2 919 aa3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 CST6Q15828 149 aa3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 HNRNPA1L2Q32P51 320 aaKnown RBP3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 SETMARQ53H47 684 aaPredicted RBP3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 MDH1BQ5I0G3 518 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms