RNA–Protein interactions for RNA: ENST00000513009.5

SDHC-208, Transcript of succinate dehydrogenase complex subunit C, humanhuman

TSL 1 (best) BASIC

Gene SDHC, Length 369 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHC-208ENST00000513009 CCHCR1Q8TD31 782 aa8.27□□□□□ -1.09
SDHC-208ENST00000513009 TFB1MQ8WVM0 346 aaKnown RBP8.27□□□□□ -1.09
SDHC-208ENST00000513009 RAPGEF5Q92565 580 aa8.27□□□□□ -1.09
SDHC-208ENST00000513009 USP7Q93009 1102 aa8.27□□□□□ -1.09
SDHC-208ENST00000513009 FATE1Q969F0 183 aa8.27□□□□□ -1.09
SDHC-208ENST00000513009 HDAC11Q96DB2 347 aa8.27□□□□□ -1.09
SDHC-208ENST00000513009 RBM15Q96T37 977 aaKnown RBP eCLIP8.27□□□□□ -1.09
SDHC-208ENST00000513009 SPOCK3Q9BQ16 436 aa8.27□□□□□ -1.09
SDHC-208ENST00000513009 WRAP53Q9BUR4 548 aaKnown RBP8.27□□□□□ -1.09
SDHC-208ENST00000513009 SLC12A9Q9BXP2 914 aa8.27□□□□□ -1.09
SDHC-208ENST00000513009 PCDH12Q9NPG4 1184 aa8.27□□□□□ -1.09
SDHC-208ENST00000513009 ETNK2Q9NVF9 386 aa8.27□□□□□ -1.09
SDHC-208ENST00000513009 SIRPGQ9P1W8 387 aa8.27□□□□□ -1.09
SDHC-208ENST00000513009 DGKBQ9Y6T7 804 aa8.27□□□□□ -1.09
SDHC-208ENST00000513009 ZFC3H1O60293 1989 aaKnown RBP8.26□□□□□ -1.09
SDHC-208ENST00000513009 LOC100996750A0A140TA64 210 aa8.26□□□□□ -1.09
SDHC-208ENST00000513009 MACROD2A1Z1Q3 448 aa8.26□□□□□ -1.09
SDHC-208ENST00000513009 GOLGA6CA6NDK9 693 aa8.26□□□□□ -1.09
SDHC-208ENST00000513009 GOLGA6BA6NDN3 693 aa8.26□□□□□ -1.09
SDHC-208ENST00000513009 HACD1B0YJ81 288 aa8.26□□□□□ -1.09
SDHC-208ENST00000513009 STMND1H3BQB6 276 aa8.26□□□□□ -1.09
SDHC-208ENST00000513009 H7C0C1 242 aa8.26□□□□□ -1.09
SDHC-208ENST00000513009 CACNB4O00305 520 aaPredicted RBP8.26□□□□□ -1.09
SDHC-208ENST00000513009 MFSD11O43934 449 aa8.26□□□□□ -1.09
SDHC-208ENST00000513009 JCHAINP01591 159 aa8.26□□□□□ -1.09
SDHC-208ENST00000513009 PYGLP06737 847 aa8.26□□□□□ -1.09
SDHC-208ENST00000513009 CCDC175P0C221 793 aa8.26□□□□□ -1.09
SDHC-208ENST00000513009 GOLGA6DP0CG33 693 aa8.26□□□□□ -1.09
SDHC-208ENST00000513009 IL4RP24394 825 aa8.26□□□□□ -1.09
SDHC-208ENST00000513009 CASRP41180 1078 aa8.26□□□□□ -1.09
SDHC-208ENST00000513009 ATP5OP48047 213 aa8.26□□□□□ -1.09
SDHC-208ENST00000513009 LIG3P49916 1009 aa8.26□□□□□ -1.09
SDHC-208ENST00000513009 ARSEP51690 589 aa8.26□□□□□ -1.09
SDHC-208ENST00000513009 SRP54P61011 504 aaKnown RBP8.26□□□□□ -1.09
SDHC-208ENST00000513009 MAXP61244 160 aa8.26□□□□□ -1.09
SDHC-208ENST00000513009 RPL26P61254 145 aaKnown RBP8.26□□□□□ -1.09
SDHC-208ENST00000513009 CYP4F2P78329 520 aa8.26□□□□□ -1.09
SDHC-208ENST00000513009 PPIDQ08752 370 aaKnown RBP8.26□□□□□ -1.09
SDHC-208ENST00000513009 CLPPQ16740 277 aaPredicted RBP8.26□□□□□ -1.09
SDHC-208ENST00000513009 WSCD2Q2TBF2 565 aa8.26□□□□□ -1.09
SDHC-208ENST00000513009 DENND2CQ68D51 928 aa8.26□□□□□ -1.09
SDHC-208ENST00000513009 BORAQ6PGQ7 559 aa8.26□□□□□ -1.09
SDHC-208ENST00000513009 ENPP7Q6UWV6 458 aa8.26□□□□□ -1.09
SDHC-208ENST00000513009 SPOCD1Q6ZMY3 1216 aa8.26□□□□□ -1.09
SDHC-208ENST00000513009 SPRED1Q7Z699 444 aa8.26□□□□□ -1.09
SDHC-208ENST00000513009 NT5DC3Q86UY8 548 aa8.26□□□□□ -1.09
SDHC-208ENST00000513009 ANKMY2Q8IV38 441 aa8.26□□□□□ -1.09
SDHC-208ENST00000513009 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.26□□□□□ -1.09
SDHC-208ENST00000513009 NETO2Q8NC67 525 aa8.26□□□□□ -1.09
SDHC-208ENST00000513009 TSACCQ96A04 125 aaPredicted RBP8.26□□□□□ -1.09
SDHC-208ENST00000513009 FAF2Q96CS3 445 aa8.26□□□□□ -1.09
SDHC-208ENST00000513009 PPP1R2P1Q96PQ5 205 aa8.26□□□□□ -1.09
SDHC-208ENST00000513009 ALS2CR12Q96Q35 445 aa8.26□□□□□ -1.09
SDHC-208ENST00000513009 VAT1Q99536 393 aa8.26□□□□□ -1.09
SDHC-208ENST00000513009 MGME1Q9BQP7 344 aa8.26□□□□□ -1.09
SDHC-208ENST00000513009 APOOQ9BUR5 198 aa8.26□□□□□ -1.09
SDHC-208ENST00000513009 KRTAP4-6Q9BYQ5 205 aa8.26□□□□□ -1.09
SDHC-208ENST00000513009 EPN3Q9H201 632 aa8.26□□□□□ -1.09
SDHC-208ENST00000513009 NOD2Q9HC29 1040 aa8.26□□□□□ -1.09
SDHC-208ENST00000513009 GOLGA6AQ9NYA3 693 aa8.26□□□□□ -1.09
SDHC-208ENST00000513009 KLQ9UEF7 1012 aa8.26□□□□□ -1.09
SDHC-208ENST00000513009 ANAPC2Q9UJX6 822 aa8.26□□□□□ -1.09
SDHC-208ENST00000513009 RPL26L1Q9UNX3 145 aaKnown RBP8.26□□□□□ -1.09
SDHC-208ENST00000513009 EFR3BQ9Y2G0 817 aa8.26□□□□□ -1.09
SDHC-208ENST00000513009 HYOU1Q9Y4L1 999 aa8.26□□□□□ -1.09
SDHC-208ENST00000513009 PCDHGA3Q9Y5H0 932 aa8.26□□□□□ -1.09
SDHC-208ENST00000513009 PCDHA3Q9Y5H8 950 aa8.26□□□□□ -1.09
SDHC-208ENST00000513009 RNF215Q9Y6U7 377 aa8.26□□□□□ -1.09
SDHC-208ENST00000513009 ARHGEF17Q96PE2 2063 aaPredicted RBP8.26□□□□□ -1.09
SDHC-208ENST00000513009 TSPAN11A1L157 253 aa8.25□□□□□ -1.09
SDHC-208ENST00000513009 A8MX80 341 aa8.25□□□□□ -1.09
SDHC-208ENST00000513009 PSMD11O00231 422 aa8.25□□□□□ -1.09
SDHC-208ENST00000513009 GNB5O14775 395 aa8.25□□□□□ -1.09
SDHC-208ENST00000513009 MSTNO14793 375 aa8.25□□□□□ -1.09
SDHC-208ENST00000513009 PJA2O43164 708 aa8.25□□□□□ -1.09
SDHC-208ENST00000513009 ZW10O43264 779 aa8.25□□□□□ -1.09
SDHC-208ENST00000513009 NUDT21O43809 227 aaKnown RBP8.25□□□□□ -1.09
SDHC-208ENST00000513009 CPNE6O95741 557 aa8.25□□□□□ -1.09
SDHC-208ENST00000513009 TNFP01375 233 aa8.25□□□□□ -1.09
SDHC-208ENST00000513009 ZNF30P17039 623 aa8.25□□□□□ -1.09
SDHC-208ENST00000513009 MSNP26038 577 aaKnown RBP8.25□□□□□ -1.09
SDHC-208ENST00000513009 VIPR1P32241 457 aa8.25□□□□□ -1.09
SDHC-208ENST00000513009 MAPK10P53779 464 aa8.25□□□□□ -1.09
SDHC-208ENST00000513009 POLE2P56282 527 aa8.25□□□□□ -1.09
SDHC-208ENST00000513009 GBE1Q04446 702 aa8.25□□□□□ -1.09
SDHC-208ENST00000513009 KCNAB2Q13303 367 aa8.25□□□□□ -1.09
SDHC-208ENST00000513009 MTM1Q13496 603 aa8.25□□□□□ -1.09
SDHC-208ENST00000513009 HLTFQ14527 1009 aaKnown RBP eCLIP8.25□□□□□ -1.09
SDHC-208ENST00000513009 INPP5AQ14642 412 aa8.25□□□□□ -1.09
SDHC-208ENST00000513009 C16orf72Q14CZ0 275 aa8.25□□□□□ -1.09
SDHC-208ENST00000513009 C14orf28Q4W4Y0 310 aa8.25□□□□□ -1.09
SDHC-208ENST00000513009 LRRC73Q5JTD7 316 aa8.25□□□□□ -1.09
SDHC-208ENST00000513009 SLC9A4Q6AI14 798 aa8.25□□□□□ -1.09
SDHC-208ENST00000513009 MFSD7Q6UXD7 560 aa8.25□□□□□ -1.09
SDHC-208ENST00000513009 DPPA4Q7L190 304 aa8.25□□□□□ -1.09
SDHC-208ENST00000513009 PID1Q7Z2X4 250 aa8.25□□□□□ -1.09
SDHC-208ENST00000513009 RD3Q7Z3Z2 195 aa8.25□□□□□ -1.09
SDHC-208ENST00000513009 TEX26Q8N6G2 289 aa8.25□□□□□ -1.09
SDHC-208ENST00000513009 PLD5Q8N7P1 536 aa8.25□□□□□ -1.09
SDHC-208ENST00000513009 Q8N9G6 341 aaPredicted RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms