RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 VEGFDO43915 354 aa12.41□□□□□ -0.42
VEGFA-216ENST00000512683 EML2O95834 649 aa12.41□□□□□ -0.42
VEGFA-216ENST00000512683 DLGAP3O95886 979 aa12.41□□□□□ -0.42
VEGFA-216ENST00000512683 ATP1A1P05023 1023 aaKnown RBP12.41□□□□□ -0.42
VEGFA-216ENST00000512683 TMEM253P0C7T8 217 aa12.41□□□□□ -0.42
VEGFA-216ENST00000512683 TCN2P20062 427 aa12.41□□□□□ -0.42
VEGFA-216ENST00000512683 GJC1P36383 396 aa12.41□□□□□ -0.42
VEGFA-216ENST00000512683 UBE2IP63279 158 aaKnown RBP12.41□□□□□ -0.42
VEGFA-216ENST00000512683 FOXK1P85037 733 aa12.41□□□□□ -0.42
VEGFA-216ENST00000512683 SRSF1Q07955 248 aaKnown RBP eCLIP12.41□□□□□ -0.424e-8■■■□□ 15.3
VEGFA-216ENST00000512683 NIPAL4Q0D2K0 466 aa12.41□□□□□ -0.42
VEGFA-216ENST00000512683 CDC20Q12834 499 aa12.41□□□□□ -0.42
VEGFA-216ENST00000512683 SLC10A2Q12908 348 aaPredicted RBP12.41□□□□□ -0.42
VEGFA-216ENST00000512683 UBAP2LQ14157 1087 aaKnown RBP12.41□□□□□ -0.42
VEGFA-216ENST00000512683 SNAP47Q5SQN1 464 aa12.41□□□□□ -0.42
VEGFA-216ENST00000512683 ABRAXAS1Q6UWZ7 409 aa12.41□□□□□ -0.42
VEGFA-216ENST00000512683 TIPARPQ7Z3E1 657 aaKnown RBP12.41□□□□□ -0.42
VEGFA-216ENST00000512683 TRIM74Q86UV6 250 aa12.41□□□□□ -0.42
VEGFA-216ENST00000512683 BPHLQ86WA6 291 aaPredicted RBP12.41□□□□□ -0.42
VEGFA-216ENST00000512683 CCDC13Q8IYE1 715 aa12.41□□□□□ -0.42
VEGFA-216ENST00000512683 TRAM1L1Q8N609 369 aa12.41□□□□□ -0.42
VEGFA-216ENST00000512683 PQLC3Q8N755 202 aa12.41□□□□□ -0.42
VEGFA-216ENST00000512683 CCNYQ8ND76 341 aa12.41□□□□□ -0.42
VEGFA-216ENST00000512683 LPCAT1Q8NF37 534 aa12.41□□□□□ -0.42
VEGFA-216ENST00000512683 SEC14L1Q92503 715 aa12.41□□□□□ -0.42
VEGFA-216ENST00000512683 C9orf72Q96LT7 481 aa12.41□□□□□ -0.42
VEGFA-216ENST00000512683 ZNF830Q96NB3 372 aaPredicted RBP12.41□□□□□ -0.42
VEGFA-216ENST00000512683 PLEKHG4BQ96PX9 1271 aa12.41□□□□□ -0.42
VEGFA-216ENST00000512683 RAB33BQ9H082 229 aa12.41□□□□□ -0.42
VEGFA-216ENST00000512683 TSPY26PQ9H489 355 aa12.41□□□□□ -0.42
VEGFA-216ENST00000512683 ABHD10Q9NUJ1 306 aa12.41□□□□□ -0.42
VEGFA-216ENST00000512683 EPHA6Q9UF33 1036 aa12.41□□□□□ -0.42
VEGFA-216ENST00000512683 KCNK6Q9Y257 313 aa12.41□□□□□ -0.42
VEGFA-216ENST00000512683 ADGRG1Q9Y653 693 aa12.41□□□□□ -0.42
VEGFA-216ENST00000512683 OAS3Q9Y6K5 1087 aaKnown RBP12.41□□□□□ -0.42
VEGFA-216ENST00000512683 SCN8AQ9UQD0 1980 aa12.41□□□□□ -0.42
VEGFA-216ENST00000512683 A8MU76 341 aa12.4□□□□□ -0.42
VEGFA-216ENST00000512683 SNX2O60749 519 aa12.4□□□□□ -0.42
VEGFA-216ENST00000512683 SLC25A14O95258 325 aaPredicted RBP12.4□□□□□ -0.42
VEGFA-216ENST00000512683 VIPP01282 170 aa12.4□□□□□ -0.42
VEGFA-216ENST00000512683 JCHAINP01591 159 aa12.4□□□□□ -0.42
VEGFA-216ENST00000512683 MT-ND3P03897 115 aa12.4□□□□□ -0.42
VEGFA-216ENST00000512683 ACP5P13686 325 aa12.4□□□□□ -0.42
VEGFA-216ENST00000512683 STAT5AP42229 794 aa12.4□□□□□ -0.42
VEGFA-216ENST00000512683 IFI35P80217 286 aaPredicted RBP12.4□□□□□ -0.42
VEGFA-216ENST00000512683 AGAP9Q5VTM2 703 aa12.4□□□□□ -0.42
VEGFA-216ENST00000512683 ZDHHC20Q5W0Z9 365 aa12.4□□□□□ -0.42
VEGFA-216ENST00000512683 CCDC70Q6NSX1 233 aa12.4□□□□□ -0.42
VEGFA-216ENST00000512683 C6orf15Q6UXA7 325 aaPredicted RBP12.4□□□□□ -0.42
VEGFA-216ENST00000512683 TMEM26Q6ZUK4 368 aa12.4□□□□□ -0.42
VEGFA-216ENST00000512683 TMC3Q7Z5M5 1100 aa12.4□□□□□ -0.42
VEGFA-216ENST00000512683 RNF214Q8ND24 703 aa12.4□□□□□ -0.42
VEGFA-216ENST00000512683 SLC35G2Q8TBE7 412 aa12.4□□□□□ -0.42
VEGFA-216ENST00000512683 BRSK1Q8TDC3 778 aa12.4□□□□□ -0.42
VEGFA-216ENST00000512683 LRRN4Q8WUT4 740 aa12.4□□□□□ -0.42
VEGFA-216ENST00000512683 RAPGEF5Q92565 580 aa12.4□□□□□ -0.42
VEGFA-216ENST00000512683 ZDHHC12Q96GR4 267 aa12.4□□□□□ -0.42
VEGFA-216ENST00000512683 ABHD17AQ96GS6 310 aa12.4□□□□□ -0.42
VEGFA-216ENST00000512683 RNF157Q96PX1 679 aa12.4□□□□□ -0.42
VEGFA-216ENST00000512683 SMIM14Q96QK8 99 aa12.4□□□□□ -0.42
VEGFA-216ENST00000512683 TIMM29Q9BSF4 260 aa12.4□□□□□ -0.42
VEGFA-216ENST00000512683 NHEJ1Q9H9Q4 299 aaPredicted RBP12.4□□□□□ -0.42
VEGFA-216ENST00000512683 SPTLC3Q9NUV7 552 aa12.4□□□□□ -0.42
VEGFA-216ENST00000512683 POT1Q9NUX5 634 aa12.4□□□□□ -0.42
VEGFA-216ENST00000512683 SIDT1Q9NXL6 827 aaKnown RBP12.4□□□□□ -0.42
VEGFA-216ENST00000512683 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.4□□□□□ -0.42
VEGFA-216ENST00000512683 ATXN10Q9UBB4 475 aa12.4□□□□□ -0.42
VEGFA-216ENST00000512683 RPS6KL1Q9Y6S9 549 aa12.4□□□□□ -0.42
VEGFA-216ENST00000512683 A0A0U1RQS6 177 aa12.39□□□□□ -0.43
VEGFA-216ENST00000512683 FADS2P1A8MWK0 482 aa12.39□□□□□ -0.43
VEGFA-216ENST00000512683 AKR1B10O60218 316 aa12.39□□□□□ -0.43
VEGFA-216ENST00000512683 MFAP3LO75121 409 aa12.39□□□□□ -0.43
VEGFA-216ENST00000512683 MTA2O94776 668 aa12.39□□□□□ -0.43
VEGFA-216ENST00000512683 UBXN7O94888 489 aa12.39□□□□□ -0.43
VEGFA-216ENST00000512683 HLA-DQB2P05538 268 aa12.39□□□□□ -0.43
VEGFA-216ENST00000512683 CCNYL3P0C7X3 344 aa12.39□□□□□ -0.43
VEGFA-216ENST00000512683 ZFXP17010 805 aaPredicted RBP12.39□□□□□ -0.43
VEGFA-216ENST00000512683 ZNF8P17098 575 aaPredicted RBP12.39□□□□□ -0.43
VEGFA-216ENST00000512683 AMD1P17707 334 aa12.39□□□□□ -0.43
VEGFA-216ENST00000512683 VCLP18206 1134 aa12.39□□□□□ -0.43
VEGFA-216ENST00000512683 KDELR1P24390 212 aa12.39□□□□□ -0.43
VEGFA-216ENST00000512683 GBE1Q04446 702 aa12.39□□□□□ -0.43
VEGFA-216ENST00000512683 PPIDQ08752 370 aaKnown RBP12.39□□□□□ -0.43
VEGFA-216ENST00000512683 TBX2Q13207 712 aaPredicted RBP12.39□□□□□ -0.43
VEGFA-216ENST00000512683 MESDQ14696 234 aa12.39□□□□□ -0.43
VEGFA-216ENST00000512683 ZNF569Q5MCW4 686 aa12.39□□□□□ -0.43
VEGFA-216ENST00000512683 TCTN3Q6NUS6 607 aa12.39□□□□□ -0.43
VEGFA-216ENST00000512683 BZW1Q7L1Q6 419 aaKnown RBP12.39□□□□□ -0.43
VEGFA-216ENST00000512683 NT5DC3Q86UY8 548 aa12.39□□□□□ -0.43
VEGFA-216ENST00000512683 LRRTM4Q86VH4 590 aa12.39□□□□□ -0.43
VEGFA-216ENST00000512683 ZNF761Q86XN6 746 aaPredicted RBP12.39□□□□□ -0.43
VEGFA-216ENST00000512683 PTRH1Q86Y79 214 aaKnown RBP12.39□□□□□ -0.43
VEGFA-216ENST00000512683 STARD8Q92502 1023 aa12.39□□□□□ -0.43
VEGFA-216ENST00000512683 GLYATL1Q969I3 302 aa12.39□□□□□ -0.43
VEGFA-216ENST00000512683 SPATA16Q9BXB7 569 aa12.39□□□□□ -0.43
VEGFA-216ENST00000512683 EPN3Q9H201 632 aa12.39□□□□□ -0.43
VEGFA-216ENST00000512683 DEF6Q9H4E7 631 aa12.39□□□□□ -0.43
VEGFA-216ENST00000512683 ZNF768Q9H5H4 540 aaKnown RBP12.39□□□□□ -0.43
VEGFA-216ENST00000512683 KLC4Q9NSK0 619 aa12.39□□□□□ -0.43
VEGFA-216ENST00000512683 ZNHIT6Q9NWK9 470 aaKnown RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms