RNA–Protein interactions for RNA: ENST00000512632.5

LIMCH1-215, Transcript of LIM and calponin homology domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMCH1, Length 4,792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-215ENST00000512632 UGT1A4P22310 534 aa9.18□□□□□ -0.94
LIMCH1-215ENST00000512632 MAP4P27816 1152 aaKnown RBP9.18□□□□□ -0.94
LIMCH1-215ENST00000512632 HMOX2P30519 316 aa9.18□□□□□ -0.94
LIMCH1-215ENST00000512632 UGT1A3P35503 534 aa9.18□□□□□ -0.94
LIMCH1-215ENST00000512632 UGT1A5P35504 534 aa9.18□□□□□ -0.94
LIMCH1-215ENST00000512632 PURAQ00577 322 aaKnown RBP9.18□□□□□ -0.94
LIMCH1-215ENST00000512632 TBC1D21Q8IYX1 336 aa9.18□□□□□ -0.94
LIMCH1-215ENST00000512632 SMYD1Q8NB12 490 aa9.18□□□□□ -0.94
LIMCH1-215ENST00000512632 ATAD1Q8NBU5 361 aa9.18□□□□□ -0.94
LIMCH1-215ENST00000512632 OR2T11Q8NH01 316 aa9.18□□□□□ -0.94
LIMCH1-215ENST00000512632 NSMCE2Q96MF7 247 aa9.18□□□□□ -0.94
LIMCH1-215ENST00000512632 ADAM2Q99965 735 aa9.18□□□□□ -0.94
LIMCH1-215ENST00000512632 TAS2R13Q9NYV9 303 aa9.18□□□□□ -0.94
LIMCH1-215ENST00000512632 PRG3Q9Y2Y8 225 aaPredicted RBP9.18□□□□□ -0.94
LIMCH1-215ENST00000512632 SPO11Q9Y5K1 396 aa9.18□□□□□ -0.94
LIMCH1-215ENST00000512632 ZFC3H1O60293 1989 aaKnown RBP9.18□□□□□ -0.94
LIMCH1-215ENST00000512632 MYLKQ15746 1914 aa9.18□□□□□ -0.94
LIMCH1-215ENST00000512632 PDCD11Q14690 1871 aaKnown RBP9.18□□□□□ -0.94
LIMCH1-215ENST00000512632 NIPSNAP2O75323 286 aa9.18□□□□□ -0.94
LIMCH1-215ENST00000512632 ZBTB11O95625 1053 aaPredicted RBP9.18□□□□□ -0.94
LIMCH1-215ENST00000512632 GGT5P36269 586 aa9.18□□□□□ -0.94
LIMCH1-215ENST00000512632 PIGFQ07326 219 aa9.18□□□□□ -0.94
LIMCH1-215ENST00000512632 SELPLGQ14242 412 aa9.18□□□□□ -0.94
LIMCH1-215ENST00000512632 SETMARQ53H47 684 aaPredicted RBP9.18□□□□□ -0.94
LIMCH1-215ENST00000512632 ACBD5Q5T8D3 534 aaPredicted RBP9.18□□□□□ -0.94
LIMCH1-215ENST00000512632 GDF6Q6KF10 455 aaPredicted RBP9.18□□□□□ -0.94
LIMCH1-215ENST00000512632 CROCCP3Q8IVE0 287 aa9.18□□□□□ -0.94
LIMCH1-215ENST00000512632 ZC3H7AQ8IWR0 971 aaKnown RBP9.18□□□□□ -0.94
LIMCH1-215ENST00000512632 OR52B6Q8NGF0 335 aa9.18□□□□□ -0.94
LIMCH1-215ENST00000512632 KIAA1191Q96A73 305 aa9.18□□□□□ -0.94
LIMCH1-215ENST00000512632 FANCEQ9HB96 536 aa9.18□□□□□ -0.94
LIMCH1-215ENST00000512632 AIG1Q9NVV5 245 aa9.18□□□□□ -0.94
LIMCH1-215ENST00000512632 EIF2B4Q9UI10 523 aaKnown RBP9.18□□□□□ -0.94
LIMCH1-215ENST00000512632 MED16Q9Y2X0 877 aa9.18□□□□□ -0.94
LIMCH1-215ENST00000512632 TCRBV5S2A0A599 114 aa9.18□□□□□ -0.94
LIMCH1-215ENST00000512632 SLC12A8A0AV02 714 aa9.18□□□□□ -0.94
LIMCH1-215ENST00000512632 TRIM64CA6NLI5 447 aa9.18□□□□□ -0.94
LIMCH1-215ENST00000512632 TNPO2O14787 897 aaKnown RBP9.18□□□□□ -0.94
LIMCH1-215ENST00000512632 MATN1P21941 496 aa9.18□□□□□ -0.94
LIMCH1-215ENST00000512632 HRH2P25021 359 aa9.18□□□□□ -0.94
LIMCH1-215ENST00000512632 HTR7P34969 479 aa9.18□□□□□ -0.94
LIMCH1-215ENST00000512632 THPOP40225 353 aa9.18□□□□□ -0.94
LIMCH1-215ENST00000512632 STC1P52823 247 aa9.18□□□□□ -0.94
LIMCH1-215ENST00000512632 ATP1A4Q13733 1029 aa9.18□□□□□ -0.94
LIMCH1-215ENST00000512632 RCAN2Q14206 197 aa9.18□□□□□ -0.94
LIMCH1-215ENST00000512632 MAPRE1Q15691 268 aaKnown RBP9.18□□□□□ -0.94
LIMCH1-215ENST00000512632 IMPG1Q17R60 797 aa9.18□□□□□ -0.94
LIMCH1-215ENST00000512632 ANKRD34AQ69YU3 496 aa9.18□□□□□ -0.94
LIMCH1-215ENST00000512632 Q6ZNX1 250 aa9.18□□□□□ -0.94
LIMCH1-215ENST00000512632 MON1AQ86VX9 555 aa9.18□□□□□ -0.94
LIMCH1-215ENST00000512632 TBC1D15Q8TC07 691 aa9.18□□□□□ -0.94
LIMCH1-215ENST00000512632 TRIM54Q9BYV2 358 aa9.18□□□□□ -0.94
LIMCH1-215ENST00000512632 POLR1EQ9GZS1 481 aaKnown RBP9.18□□□□□ -0.94
LIMCH1-215ENST00000512632 SYTL2Q9HCH5 934 aa9.18□□□□□ -0.94
LIMCH1-215ENST00000512632 BPIFA1Q9NP55 256 aa9.18□□□□□ -0.94
LIMCH1-215ENST00000512632 PRDM5Q9NQX1 630 aaPredicted RBP9.18□□□□□ -0.94
LIMCH1-215ENST00000512632 TBC1D23Q9NUY8 699 aa9.18□□□□□ -0.94
LIMCH1-215ENST00000512632 LEF1Q9UJU2 399 aaPredicted RBP9.18□□□□□ -0.94
LIMCH1-215ENST00000512632 A0A0D9SEW6 157 aa9.17□□□□□ -0.94
LIMCH1-215ENST00000512632 IQCF5A8MTL0 148 aa9.17□□□□□ -0.94
LIMCH1-215ENST00000512632 GPR182O15218 404 aa9.17□□□□□ -0.94
LIMCH1-215ENST00000512632 ZSCAN9O15535 394 aaPredicted RBP9.17□□□□□ -0.94
LIMCH1-215ENST00000512632 OR1I1O60431 355 aa9.17□□□□□ -0.94
LIMCH1-215ENST00000512632 SNAP91O60641 907 aa9.17□□□□□ -0.94
LIMCH1-215ENST00000512632 KERAO60938 352 aa9.17□□□□□ -0.94
LIMCH1-215ENST00000512632 KATNA1O75449 491 aa9.17□□□□□ -0.94
LIMCH1-215ENST00000512632 CHEK2O96017 543 aa9.17□□□□□ -0.94
LIMCH1-215ENST00000512632 FCGR1AP12314 374 aa9.17□□□□□ -0.94
LIMCH1-215ENST00000512632 SHMT2P34897 504 aa9.17□□□□□ -0.94
LIMCH1-215ENST00000512632 C21orf59P57076 290 aa9.17□□□□□ -0.94
LIMCH1-215ENST00000512632 GNA12Q03113 381 aa9.17□□□□□ -0.94
LIMCH1-215ENST00000512632 MAP2K5Q13163 448 aa9.17□□□□□ -0.94
LIMCH1-215ENST00000512632 BFSP2Q13515 415 aa9.17□□□□□ -0.94
LIMCH1-215ENST00000512632 FAM110CQ1W6H9 321 aa9.17□□□□□ -0.94
LIMCH1-215ENST00000512632 C10orf120Q5SQS8 335 aa9.17□□□□□ -0.94
LIMCH1-215ENST00000512632 LDLRAP1Q5SW96 308 aa9.17□□□□□ -0.94
LIMCH1-215ENST00000512632 BEND5Q7L4P6 421 aa9.17□□□□□ -0.94
LIMCH1-215ENST00000512632 HS3ST5Q8IZT8 346 aa9.17□□□□□ -0.94
LIMCH1-215ENST00000512632 RHEBL1Q8TAI7 183 aa9.17□□□□□ -0.94
LIMCH1-215ENST00000512632 BRSK1Q8TDC3 778 aa9.17□□□□□ -0.94
LIMCH1-215ENST00000512632 ADAMTS16Q8TE57 1224 aa9.17□□□□□ -0.94
LIMCH1-215ENST00000512632 FUBP1Q96AE4 644 aaKnown RBP9.17□□□□□ -0.94
LIMCH1-215ENST00000512632 SLC39A13Q96H72 371 aa9.17□□□□□ -0.94
LIMCH1-215ENST00000512632 ZNF599Q96NL3 588 aa9.17□□□□□ -0.94
LIMCH1-215ENST00000512632 KATNAL1Q9BW62 490 aa9.17□□□□□ -0.94
LIMCH1-215ENST00000512632 CD320Q9NPF0 282 aa9.17□□□□□ -0.94
LIMCH1-215ENST00000512632 CD274Q9NZQ7 290 aa9.17□□□□□ -0.94
LIMCH1-215ENST00000512632 TLR6Q9Y2C9 796 aa9.17□□□□□ -0.94
LIMCH1-215ENST00000512632 ZNF510Q9Y2H8 683 aa9.17□□□□□ -0.94
LIMCH1-215ENST00000512632 COMMD10Q9Y6G5 202 aa9.17□□□□□ -0.94
LIMCH1-215ENST00000512632 GPR39O43194 453 aa9.17□□□□□ -0.94
LIMCH1-215ENST00000512632 ATP6V1G1O75348 118 aa9.17□□□□□ -0.94
LIMCH1-215ENST00000512632 HTR6P50406 440 aa9.17□□□□□ -0.94
LIMCH1-215ENST00000512632 BMXP51813 675 aa9.17□□□□□ -0.94
LIMCH1-215ENST00000512632 RAD51Q06609 339 aa9.17□□□□□ -0.94
LIMCH1-215ENST00000512632 TUSC3Q13454 348 aa9.17□□□□□ -0.94
LIMCH1-215ENST00000512632 C18orf21Q32NC0 220 aaPredicted RBP9.17□□□□□ -0.94
LIMCH1-215ENST00000512632 C6orf136Q5SQH8 315 aa9.17□□□□□ -0.94
LIMCH1-215ENST00000512632 C16orf87Q6PH81 154 aa9.17□□□□□ -0.94
LIMCH1-215ENST00000512632 DHRS4L2Q6PKH6 230 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms