RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 DNPH1O43598 174 aa6.7□□□□□ -1.34
USP53-206ENST00000510737 SOX30O94993 753 aa6.7□□□□□ -1.34
USP53-206ENST00000510737 HSPD1P10809 573 aaKnown RBP6.7□□□□□ -1.34
USP53-206ENST00000510737 PDHBP11177 359 aa6.7□□□□□ -1.34
USP53-206ENST00000510737 LAMP2P13473 410 aa6.7□□□□□ -1.34
USP53-206ENST00000510737 AKT1P31749 480 aa6.7□□□□□ -1.34
USP53-206ENST00000510737 CA8P35219 290 aa6.7□□□□□ -1.34
USP53-206ENST00000510737 SAFBQ15424 915 aaKnown RBP eCLIP6.7□□□□□ -1.34
USP53-206ENST00000510737 STPG1Q5TH74 334 aa6.7□□□□□ -1.34
USP53-206ENST00000510737 C15orf39Q6ZRI6 1047 aa6.7□□□□□ -1.34
USP53-206ENST00000510737 SLC24A5Q71RS6 500 aa6.7□□□□□ -1.34
USP53-206ENST00000510737 H1FNTQ75WM6 255 aaPredicted RBP6.7□□□□□ -1.34
USP53-206ENST00000510737 FAM185AQ8N0U4 392 aa6.7□□□□□ -1.34
USP53-206ENST00000510737 VPS52Q8N1B4 723 aa6.7□□□□□ -1.34
USP53-206ENST00000510737 HORMAD2Q8N7B1 307 aa6.7□□□□□ -1.34
USP53-206ENST00000510737 RTP4Q96DX8 246 aa6.7□□□□□ -1.34
USP53-206ENST00000510737 ZNF558Q96NG5 402 aa6.7□□□□□ -1.34
USP53-206ENST00000510737 TMEM47Q9BQJ4 181 aa6.7□□□□□ -1.34
USP53-206ENST00000510737 UBA5Q9GZZ9 404 aa6.7□□□□□ -1.34
USP53-206ENST00000510737 MAF1Q9H063 256 aa6.7□□□□□ -1.34
USP53-206ENST00000510737 Q9N2J8 555 aa6.7□□□□□ -1.34
USP53-206ENST00000510737 WDR6Q9NNW5 1121 aaKnown RBP6.7□□□□□ -1.34
USP53-206ENST00000510737 LTB4R2Q9NPC1 389 aa6.7□□□□□ -1.34
USP53-206ENST00000510737 PCDHGB2Q9Y5G2 931 aa6.7□□□□□ -1.34
USP53-206ENST00000510737 PATJQ8NI35 1801 aa6.7□□□□□ -1.34
USP53-206ENST00000510737 IGSF9BQ9UPX0 1349 aa6.7□□□□□ -1.34
USP53-206ENST00000510737 TENM4Q6N022 2769 aa6.69□□□□□ -1.34
USP53-206ENST00000510737 TSPY2A6NKD2 308 aa6.69□□□□□ -1.34
USP53-206ENST00000510737 SHISA7A6NL88 538 aa6.69□□□□□ -1.34
USP53-206ENST00000510737 UNGP13051 313 aaPredicted RBP6.69□□□□□ -1.34
USP53-206ENST00000510737 TRIM27P14373 513 aa6.69□□□□□ -1.34
USP53-206ENST00000510737 TCEA1P23193 301 aaKnown RBP6.69□□□□□ -1.34
USP53-206ENST00000510737 PPM1AP35813 382 aa6.69□□□□□ -1.34
USP53-206ENST00000510737 AVPR1AP37288 418 aa6.69□□□□□ -1.34
USP53-206ENST00000510737 TDO2P48775 406 aa6.69□□□□□ -1.34
USP53-206ENST00000510737 CLCN4P51793 760 aa6.69□□□□□ -1.34
USP53-206ENST00000510737 ALDH18A1P54886 795 aaKnown RBP6.69□□□□□ -1.34
USP53-206ENST00000510737 POU5F1BQ06416 359 aa6.69□□□□□ -1.34
USP53-206ENST00000510737 SRSF5Q13243 272 aaKnown RBP6.69□□□□□ -1.34
USP53-206ENST00000510737 HTR4Q13639 388 aa6.69□□□□□ -1.34
USP53-206ENST00000510737 SIM2Q14190 667 aaPredicted RBP6.69□□□□□ -1.34
USP53-206ENST00000510737 PLCB4Q15147 1175 aa6.69□□□□□ -1.34
USP53-206ENST00000510737 MLF2Q15773 248 aaPredicted RBP6.69□□□□□ -1.34
USP53-206ENST00000510737 PLK5Q496M5 336 aa6.69□□□□□ -1.34
USP53-206ENST00000510737 ZNF672Q499Z4 452 aaPredicted RBP6.69□□□□□ -1.34
USP53-206ENST00000510737 STOX1Q6ZVD7 989 aa6.69□□□□□ -1.34
USP53-206ENST00000510737 ANKS1BQ7Z6G8 1248 aa6.69□□□□□ -1.34
USP53-206ENST00000510737 FJX1Q86VR8 437 aa6.69□□□□□ -1.34
USP53-206ENST00000510737 MUC20Q8N307 709 aaPredicted RBP6.69□□□□□ -1.34
USP53-206ENST00000510737 DPP10Q8N608 796 aa6.69□□□□□ -1.34
USP53-206ENST00000510737 WDR60Q8WVS4 1066 aa6.69□□□□□ -1.34
USP53-206ENST00000510737 PKP4Q99569 1192 aa6.69□□□□□ -1.34
USP53-206ENST00000510737 HDHD5Q9BXW7 423 aa6.69□□□□□ -1.34
USP53-206ENST00000510737 TMEM117Q9H0C3 514 aa6.69□□□□□ -1.34
USP53-206ENST00000510737 FAM49AQ9H0Q0 323 aaPredicted RBP6.69□□□□□ -1.34
USP53-206ENST00000510737 ZBP1Q9H171 429 aa6.69□□□□□ -1.34
USP53-206ENST00000510737 OCIAD1Q9NX40 245 aa6.69□□□□□ -1.34
USP53-206ENST00000510737 TMEM161AQ9NX61 479 aa6.69□□□□□ -1.34
USP53-206ENST00000510737 KLHL42Q9P2K6 505 aa6.69□□□□□ -1.34
USP53-206ENST00000510737 TUBE1Q9UJT0 475 aa6.69□□□□□ -1.34
USP53-206ENST00000510737 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.69□□□□□ -1.34
USP53-206ENST00000510737 TRPV2Q9Y5S1 764 aa6.69□□□□□ -1.34
USP53-206ENST00000510737 PLSCR5A0PG75 271 aa6.68□□□□□ -1.34
USP53-206ENST00000510737 DENND3A2RUS2 1198 aa6.68□□□□□ -1.34
USP53-206ENST00000510737 RASA4BC9J798 803 aa6.68□□□□□ -1.34
USP53-206ENST00000510737 HNRNPDLO14979 420 aaKnown RBP6.68□□□□□ -1.34
USP53-206ENST00000510737 SLC16A5O15375 505 aa6.68□□□□□ -1.34
USP53-206ENST00000510737 RASA4O43374 803 aa6.68□□□□□ -1.34
USP53-206ENST00000510737 UMODP07911 640 aa6.68□□□□□ -1.34
USP53-206ENST00000510737 GOLGA8HP0CJ92 632 aa6.68□□□□□ -1.34
USP53-206ENST00000510737 MAGEA9P43362 315 aa6.68□□□□□ -1.34
USP53-206ENST00000510737 RPS9P46781 194 aaKnown RBP6.68□□□□□ -1.34
USP53-206ENST00000510737 METAP2P50579 478 aaKnown RBP eCLIP6.68□□□□□ -1.34
USP53-206ENST00000510737 HSD17B4P51659 736 aa6.68□□□□□ -1.34
USP53-206ENST00000510737 RNASELQ05823 741 aaKnown RBP6.68□□□□□ -1.34
USP53-206ENST00000510737 SF3A3Q12874 501 aaKnown RBP eCLIP6.68□□□□□ -1.34
USP53-206ENST00000510737 PPFIA1Q13136 1202 aa6.68□□□□□ -1.34
USP53-206ENST00000510737 COL28A1Q2UY09 1125 aa6.68□□□□□ -1.34
USP53-206ENST00000510737 VWA5B1Q5TIE3 1220 aa6.68□□□□□ -1.34
USP53-206ENST00000510737 METTL7BQ6UX53 244 aa6.68□□□□□ -1.34
USP53-206ENST00000510737 TMEM173Q86WV6 379 aaPredicted RBP6.68□□□□□ -1.34
USP53-206ENST00000510737 OR2C3Q8N628 320 aa6.68□□□□□ -1.34
USP53-206ENST00000510737 FGF14Q92915 247 aa6.68□□□□□ -1.34
USP53-206ENST00000510737 KLHL5Q96PQ7 755 aa6.68□□□□□ -1.34
USP53-206ENST00000510737 FIZ1Q96SL8 496 aa6.68□□□□□ -1.34
USP53-206ENST00000510737 RETREG1Q9H6L5 497 aa6.68□□□□□ -1.34
USP53-206ENST00000510737 ELAC1Q9H777 363 aaKnown RBP6.68□□□□□ -1.34
USP53-206ENST00000510737 ZNF215Q9UL58 517 aaPredicted RBP6.68□□□□□ -1.34
USP53-206ENST00000510737 SLC39A10Q9ULF5 831 aa6.68□□□□□ -1.34
USP53-206ENST00000510737 RAP2CQ9Y3L5 183 aa6.68□□□□□ -1.34
USP53-206ENST00000510737 ABCB11O95342 1321 aa6.68□□□□□ -1.34
USP53-206ENST00000510737 KIAA1217Q5T5P2 1943 aa6.68□□□□□ -1.34
USP53-206ENST00000510737 CNOT1A5YKK6 2376 aaKnown RBP6.67□□□□□ -1.34
USP53-206ENST00000510737 CELSR3Q9NYQ7 3312 aa6.67□□□□□ -1.34
USP53-206ENST00000510737 GSTTP1A0A1W2PQM5 241 aa6.67□□□□□ -1.34
USP53-206ENST00000510737 FAM90A18PA6NE21 464 aa6.67□□□□□ -1.34
USP53-206ENST00000510737 FAM90A16PA6NEW6 464 aa6.67□□□□□ -1.34
USP53-206ENST00000510737 AGAP5A6NIR3 686 aa6.67□□□□□ -1.34
USP53-206ENST00000510737 FAM90A9PA6NNJ1 464 aa6.67□□□□□ -1.34
USP53-206ENST00000510737 FAM90A5PA8MXJ8 464 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms