RNA–Protein interactions for RNA: ENST00000510472.1

HMGXB3-203, Transcript of HMG-box containing 3, humanhuman

TSL 2

Gene HMGXB3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-203ENST00000510472 KCND1Q9NSA2 647 aa11.61□□□□□ -0.55
HMGXB3-203ENST00000510472 SLC23A2Q9UGH3 650 aa11.61□□□□□ -0.55
HMGXB3-203ENST00000510472 ZFHX4Q86UP3 3567 aa11.61□□□□□ -0.55
HMGXB3-203ENST00000510472 FRYQ5TBA9 3013 aa11.6□□□□□ -0.55
HMGXB3-203ENST00000510472 A0A1W2PQM1 296 aa11.6□□□□□ -0.55
HMGXB3-203ENST00000510472 TRABD2BA6NFA1 517 aa11.6□□□□□ -0.55
HMGXB3-203ENST00000510472 FANCGO15287 622 aa11.6□□□□□ -0.55
HMGXB3-203ENST00000510472 SRP72O76094 671 aaKnown RBP11.6□□□□□ -0.55
HMGXB3-203ENST00000510472 CDK14O94921 469 aa11.6□□□□□ -0.55
HMGXB3-203ENST00000510472 ECEL1O95672 775 aa11.6□□□□□ -0.55
HMGXB3-203ENST00000510472 PROS1P07225 676 aa11.6□□□□□ -0.55
HMGXB3-203ENST00000510472 MAZP56270 477 aaKnown RBP11.6□□□□□ -0.55
HMGXB3-203ENST00000510472 B4GALNT1Q00973 533 aa11.6□□□□□ -0.55
HMGXB3-203ENST00000510472 NFATC2Q13469 925 aa11.6□□□□□ -0.55
HMGXB3-203ENST00000510472 ITGA9Q13797 1035 aa11.6□□□□□ -0.55
HMGXB3-203ENST00000510472 LDLRAP1Q5SW96 308 aa11.6□□□□□ -0.55
HMGXB3-203ENST00000510472 GPRC6AQ5T6X5 926 aa11.6□□□□□ -0.55
HMGXB3-203ENST00000510472 PAPD7Q5XG87 772 aaKnown RBP11.6□□□□□ -0.55
HMGXB3-203ENST00000510472 IYDQ6PHW0 289 aa11.6□□□□□ -0.55
HMGXB3-203ENST00000510472 CHST15Q7LFX5 561 aaPredicted RBP11.6□□□□□ -0.55
HMGXB3-203ENST00000510472 SFRP1Q8N474 314 aa11.6□□□□□ -0.55
HMGXB3-203ENST00000510472 ARL14Q8N4G2 192 aa11.6□□□□□ -0.55
HMGXB3-203ENST00000510472 CCDC89Q8N998 374 aa11.6□□□□□ -0.55
HMGXB3-203ENST00000510472 OR52K1Q8NGK4 314 aa11.6□□□□□ -0.55
HMGXB3-203ENST00000510472 MAPK15Q8TD08 544 aa11.6□□□□□ -0.55
HMGXB3-203ENST00000510472 ZDHHC1Q8WTX9 485 aa11.6□□□□□ -0.55
HMGXB3-203ENST00000510472 PATE1Q8WXA2 126 aa11.6□□□□□ -0.55
HMGXB3-203ENST00000510472 CCDC74AQ96AQ1 378 aa11.6□□□□□ -0.55
HMGXB3-203ENST00000510472 LRRC45Q96CN5 670 aa11.6□□□□□ -0.55
HMGXB3-203ENST00000510472 EIF2B3Q9NR50 452 aaKnown RBP11.6□□□□□ -0.55
HMGXB3-203ENST00000510472 NLE1Q9NVX2 485 aaPredicted RBP11.6□□□□□ -0.55
HMGXB3-203ENST00000510472 SMARCAL1Q9NZC9 954 aa11.6□□□□□ -0.55
HMGXB3-203ENST00000510472 LRIT1Q9P2V4 623 aa11.6□□□□□ -0.55
HMGXB3-203ENST00000510472 DKK4Q9UBT3 224 aa11.6□□□□□ -0.55
HMGXB3-203ENST00000510472 TBC1D29Q9UFV1 150 aa11.6□□□□□ -0.55
HMGXB3-203ENST00000510472 FKBPLQ9UIM3 349 aa11.6□□□□□ -0.55
HMGXB3-203ENST00000510472 CLCA2Q9UQC9 943 aa11.6□□□□□ -0.55
HMGXB3-203ENST00000510472 RNF215Q9Y6U7 377 aa11.6□□□□□ -0.55
HMGXB3-203ENST00000510472 LRP4O75096 1905 aa11.6□□□□□ -0.55
HMGXB3-203ENST00000510472 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.59□□□□□ -0.55
HMGXB3-203ENST00000510472 TRBV5-4A0A0C4DH59 114 aa11.59□□□□□ -0.55
HMGXB3-203ENST00000510472 B4DGG1 531 aa11.59□□□□□ -0.55
HMGXB3-203ENST00000510472 KMOO15229 486 aa11.59□□□□□ -0.55
HMGXB3-203ENST00000510472 ZNF185O15231 689 aa11.59□□□□□ -0.55
HMGXB3-203ENST00000510472 PPM1DO15297 605 aa11.59□□□□□ -0.55
HMGXB3-203ENST00000510472 B4GAT1O43505 415 aa11.59□□□□□ -0.55
HMGXB3-203ENST00000510472 SGTAO43765 313 aa11.59□□□□□ -0.55
HMGXB3-203ENST00000510472 TCEA3O75764 348 aa11.59□□□□□ -0.55
HMGXB3-203ENST00000510472 PRAMEF1O95521 474 aa11.59□□□□□ -0.55
HMGXB3-203ENST00000510472 ACP5P13686 325 aa11.59□□□□□ -0.55
HMGXB3-203ENST00000510472 ZNF7P17097 686 aaPredicted RBP11.59□□□□□ -0.55
HMGXB3-203ENST00000510472 MSNP26038 577 aaKnown RBP11.59□□□□□ -0.55
HMGXB3-203ENST00000510472 ACTN2P35609 894 aa11.59□□□□□ -0.55
HMGXB3-203ENST00000510472 HADHAP40939 763 aa11.59□□□□□ -0.55
HMGXB3-203ENST00000510472 MAGEA6P43360 314 aa11.59□□□□□ -0.55
HMGXB3-203ENST00000510472 CTSCP53634 463 aa11.59□□□□□ -0.55
HMGXB3-203ENST00000510472 ACVR1Q04771 509 aa11.59□□□□□ -0.55
HMGXB3-203ENST00000510472 CDH17Q12864 832 aa11.59□□□□□ -0.55
HMGXB3-203ENST00000510472 SQSTM1Q13501 440 aa11.59□□□□□ -0.55
HMGXB3-203ENST00000510472 POU6F1Q14863 301 aa11.59□□□□□ -0.55
HMGXB3-203ENST00000510472 RTP5Q14D33 572 aa11.59□□□□□ -0.55
HMGXB3-203ENST00000510472 RASGEF1AQ8N9B8 481 aa11.59□□□□□ -0.55
HMGXB3-203ENST00000510472 WDR48Q8TAF3 677 aa11.59□□□□□ -0.55
HMGXB3-203ENST00000510472 STYXQ8WUJ0 223 aa11.59□□□□□ -0.55
HMGXB3-203ENST00000510472 MAGOHBQ96A72 148 aaKnown RBP11.59□□□□□ -0.55
HMGXB3-203ENST00000510472 CDKN2AIPNLQ96HQ2 116 aa11.59□□□□□ -0.55
HMGXB3-203ENST00000510472 DNAJC1Q96KC8 554 aaKnown RBP11.59□□□□□ -0.55
HMGXB3-203ENST00000510472 RANBP9Q96S59 729 aa11.59□□□□□ -0.55
HMGXB3-203ENST00000510472 TIMM29Q9BSF4 260 aa11.59□□□□□ -0.55
HMGXB3-203ENST00000510472 AP1M1Q9BXS5 423 aa11.59□□□□□ -0.55
HMGXB3-203ENST00000510472 ABCG4Q9H172 646 aa11.59□□□□□ -0.55
HMGXB3-203ENST00000510472 PIH1D1Q9NWS0 290 aaKnown RBP11.59□□□□□ -0.55
HMGXB3-203ENST00000510472 RIMKLBQ9ULI2 386 aa11.59□□□□□ -0.55
HMGXB3-203ENST00000510472 DNMT3AQ9Y6K1 912 aaPredicted RBP11.59□□□□□ -0.55
HMGXB3-203ENST00000510472 PLXNB3Q9ULL4 1909 aa11.58□□□□□ -0.55
HMGXB3-203ENST00000510472 ASPMQ8IZT6 3477 aa11.58□□□□□ -0.56
HMGXB3-203ENST00000510472 FREM2Q5SZK8 3169 aa11.58□□□□□ -0.56
HMGXB3-203ENST00000510472 AKAP13Q12802 2813 aa11.58□□□□□ -0.56
HMGXB3-203ENST00000510472 IGLV3-16A0A075B6K0 115 aa11.58□□□□□ -0.56
HMGXB3-203ENST00000510472 PGRMC1O00264 195 aaKnown RBP11.58□□□□□ -0.56
HMGXB3-203ENST00000510472 TAF4O00268 1085 aa11.58□□□□□ -0.56
HMGXB3-203ENST00000510472 CCL22O00626 93 aa11.58□□□□□ -0.56
HMGXB3-203ENST00000510472 KCNJ13O60928 360 aa11.58□□□□□ -0.56
HMGXB3-203ENST00000510472 APRTP07741 180 aa11.58□□□□□ -0.56
HMGXB3-203ENST00000510472 TCP1P17987 556 aaKnown RBP11.58□□□□□ -0.56
HMGXB3-203ENST00000510472 COILP38432 576 aaPredicted RBP11.58□□□□□ -0.56
HMGXB3-203ENST00000510472 FASLGP48023 281 aa11.58□□□□□ -0.56
HMGXB3-203ENST00000510472 ARSDP51689 593 aa11.58□□□□□ -0.56
HMGXB3-203ENST00000510472 PDX1P52945 283 aa11.58□□□□□ -0.56
HMGXB3-203ENST00000510472 CCL7P80098 99 aa11.58□□□□□ -0.56
HMGXB3-203ENST00000510472 CCDC173Q0VFZ6 552 aa11.58□□□□□ -0.56
HMGXB3-203ENST00000510472 KCTD19Q17RG1 926 aaPredicted RBP11.58□□□□□ -0.56
HMGXB3-203ENST00000510472 ISXQ2M1V0 245 aa11.58□□□□□ -0.56
HMGXB3-203ENST00000510472 GPR33Q49SQ1 333 aa11.58□□□□□ -0.56
HMGXB3-203ENST00000510472 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.58□□□□□ -0.56
HMGXB3-203ENST00000510472 ABRAXAS1Q6UWZ7 409 aa11.58□□□□□ -0.56
HMGXB3-203ENST00000510472 XKR5Q6UX68 686 aa11.58□□□□□ -0.56
HMGXB3-203ENST00000510472 WASH2PQ6VEQ5 465 aa11.58□□□□□ -0.56
HMGXB3-203ENST00000510472 MICALCLQ6ZW33 695 aa11.58□□□□□ -0.56
HMGXB3-203ENST00000510472 SNX20Q7Z614 316 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms